Miyakogusa Predicted Gene

Lj0g3v0281979.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0281979.1 CUFF.18753.1
         (89 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g022370.1 | Dof domain zinc finger protein | HC | chr4:743...    87   3e-18
Medtr4g063780.1 | Dof domain zinc finger protein | HC | chr4:236...    58   2e-09
Medtr7g059400.1 | Dof domain zinc finger protein | HC | chr7:215...    57   4e-09
Medtr2g096740.2 | Dof domain zinc finger protein | HC | chr2:413...    52   1e-07
Medtr7g024670.1 | Dof domain zinc finger protein | HC | chr7:813...    49   8e-07

>Medtr4g022370.1 | Dof domain zinc finger protein | HC |
          chr4:7434526-7436301 | 20130731
          Length = 364

 Score = 87.4 bits (215), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 49/95 (51%), Positives = 53/95 (55%), Gaps = 6/95 (6%)

Query: 1  MVFTSIPVAYLDAANWXXXXXXXXXXXXXSTS------QQRLXXXXXXXXXXHGAGGTGS 54
          MVFTSIP AYLDAANW               S      Q +           HG G TGS
Sbjct: 1  MVFTSIPAAYLDAANWQQQQQNHHQQPGNGGSVSQQLLQTQTPPPQQSQSQPHGGGSTGS 60

Query: 55 IRWEWIAERARMANRPKPETALKCPRCHSTNTKFC 89
          IR   +++RARMAN P PETALKCPRC STNTKFC
Sbjct: 61 IRPGSMSDRARMANMPMPETALKCPRCESTNTKFC 95


>Medtr4g063780.1 | Dof domain zinc finger protein | HC |
          chr4:23662915-23664638 | 20130731
          Length = 334

 Score = 58.2 bits (139), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/89 (42%), Positives = 44/89 (49%), Gaps = 1/89 (1%)

Query: 1  MVFTSIPVAYLDAANWXXXXXXXXXXXXXSTSQQRLXXXXXXXXXXHGAGGTGSIRWEWI 60
          MVF+SI   Y+D  NW               +Q              G G  GSIR   +
Sbjct: 1  MVFSSI-QGYVDPPNWHHQQPNHQQANGSDNTQLLPPLPPQVGGSTTGGGTMGSIRPGSM 59

Query: 61 AERARMANRPKPETALKCPRCHSTNTKFC 89
          A+RAR+A  P PE ALKCPRC STNTKFC
Sbjct: 60 ADRARLAKLPPPEPALKCPRCDSTNTKFC 88


>Medtr7g059400.1 | Dof domain zinc finger protein | HC |
          chr7:21548976-21550742 | 20130731
          Length = 348

 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/90 (40%), Positives = 42/90 (46%), Gaps = 2/90 (2%)

Query: 1  MVFTSIPVAYLDAANWXXXX-XXXXXXXXXSTSQQRLXXXXXXXXXXHGAGGTGSIRWEW 59
          MV+TS+P  Y+D ANW              +T                     GSIR   
Sbjct: 1  MVYTSLP-PYMDPANWHQQQPNHQVANTSVNTPLLIPPPQPPPSNLTPSQPHGGSIRPGS 59

Query: 60 IAERARMANRPKPETALKCPRCHSTNTKFC 89
          +A+RARMAN P  E   KCPRC STNTKFC
Sbjct: 60 MADRARMANIPMQEPLQKCPRCDSTNTKFC 89


>Medtr2g096740.2 | Dof domain zinc finger protein | HC |
          chr2:41334660-41336526 | 20130731
          Length = 303

 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/103 (39%), Positives = 46/103 (44%), Gaps = 27/103 (26%)

Query: 1  MVFTSIPVAYLDAANWXXXXXXXXXXXXXSTSQQRLXXXXXXXXXXHGAGGT---GSIRW 57
          MVF+SIP +YLD  NW             S+SQ             HGAG     GSI  
Sbjct: 1  MVFSSIP-SYLDPLNWQQQPNQHQLLPPLSSSQ------------VHGAGSIIRPGSIPD 47

Query: 58 EWIAERAR----------MANRPKP-ETALKCPRCHSTNTKFC 89
          +  A+ A            A  P P ET LKCPRC STNTKFC
Sbjct: 48 QAQAQAAHEVHTGQVQTHQAKLPPPSETNLKCPRCESTNTKFC 90


>Medtr7g024670.1 | Dof domain zinc finger protein | HC |
          chr7:8132842-8130987 | 20130731
          Length = 373

 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 31/91 (34%), Positives = 41/91 (45%), Gaps = 3/91 (3%)

Query: 1  MVFTSIPVAYLDAANWXXXXXXXXXXXXXSTSQQRLXXXXXXXXXXHGAGGTGSIRWEWI 60
          MVF S+P+ YLD  NW              ++ Q L                GS R   +
Sbjct: 1  MVFPSLPI-YLDPPNWSQQQAGIGIGDQNPSALQPLSASMMSVTVEADGSYQGSRRPVSM 59

Query: 61 AERARMA--NRPKPETALKCPRCHSTNTKFC 89
           +RA+M+  ++     A KCPRC STNTKFC
Sbjct: 60 TDRAKMSKIHQNDAAAAQKCPRCESTNTKFC 90