Miyakogusa Predicted Gene

Lj0g3v0281789.2
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0281789.2 Non Characterized Hit- tr|G7I7W3|G7I7W3_MEDTR
ATP-dependent helicase, putative OS=Medicago truncatul,39.57,4e-18,
,CUFF.18743.2
         (414 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g060870.1 | hypothetical protein | LC | chr2:25823903-2582...    67   4e-11

>Medtr2g060870.1 | hypothetical protein | LC |
           chr2:25823903-25821879 | 20130731
          Length = 460

 Score = 66.6 bits (161), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/142 (37%), Positives = 69/142 (48%), Gaps = 18/142 (12%)

Query: 271 SIMWYEERSEKRDFANHNEGSN-------FYLRLFRRRNKDPRVYNLLTSDEVAGLIVGD 323
           S M YE+ +  + F    E  N         LRL   R  D RVYNL T  EVA LI GD
Sbjct: 299 SKMLYEKNTHAKCFKMARERLNSDIHVPDLKLRLISDRKTDGRVYNLPTVSEVAALIAGD 358

Query: 324 IENLEAGRDIIVKKQSGELVRIPEYHVSFLPLQDEIPVSEAFSNDADRKRFKISMLEFIC 383
           + + E  RDII++ Q G+L RI E+H S+L  Q   P+   F    DR R  I+      
Sbjct: 359 VGDAEE-RDIIIQGQGGQLQRIDEFHASYLAYQ--YPL--LFPYGEDRYRPNIA------ 407

Query: 384 FRLQEQITEYGNIVRAGRLFQR 405
            R  EQI +  ++ +  RL  R
Sbjct: 408 HRETEQIDDVMDVNKHNRLTIR 429