Miyakogusa Predicted Gene

Lj0g3v0281489.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0281489.1 Non Characterized Hit- tr|I1MN40|I1MN40_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.57465
PE,83.99,0,VWA_2,NULL; UIM,Ubiquitin interacting motif; 26S PROTEASOME
NON-ATPASE REGULATORY SUBUNIT 4,NULL; vo,CUFF.18717.1
         (405 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g022440.1 | 26S proteasome non-ATPase regulatory subunit-l...   532   e-151
Medtr8g075390.1 | 26S proteasome non-ATPase regulatory subunit-l...   515   e-146

>Medtr5g022440.1 | 26S proteasome non-ATPase regulatory subunit-like
           protein | HC | chr5:8842916-8848889 | 20130731
          Length = 398

 Score =  532 bits (1371), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 275/392 (70%), Positives = 293/392 (74%), Gaps = 5/392 (1%)

Query: 1   MVLEATMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEATMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVL MAGKGVR
Sbjct: 1   MVLEATMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVLIMAGKGVR 60

Query: 61  VLVTPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFTGSPIKH 120
           VLVTPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQ QRIIVF GS +KH
Sbjct: 61  VLVTPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQHQRIIVFAGSHVKH 120

Query: 121 EKKMLEMIGRKLKKNSVALDIVNFGEEDEGKTEKLDALLAAVNNNDTSRMAHVPPGPNAL 180
           EKKMLEMIGRKLKKNSVALD+VNFGEEDE KTEKL+AL+AAVNNNDTS + HVP GPNAL
Sbjct: 121 EKKMLEMIGRKLKKNSVALDVVNFGEEDEAKTEKLEALVAAVNNNDTSHIVHVPAGPNAL 180

Query: 181 SDVLISTPIFTXXXXXXXXXXXXXXXXXXXXXVSGYDFGVDPNLDPELALALRVSMXXXX 240
           SDVLISTPIFT                        YDFGVDPNLDPELALALRVSM    
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAAAAGGGTG-YDFGVDPNLDPELALALRVSMEEER 239

Query: 241 XXXXXXXXXXXXXXXXXNGGEQQASSQDAAMIERXXXXXXXXXXKTNDMMDDENALLQQA 300
                               +++  SQDA M E           KT D+MDDENALLQQA
Sbjct: 240 ARQEAAAKKAAEDAAK----QEKGGSQDATMTEGASASTSEAENKTTDLMDDENALLQQA 295

Query: 301 LAMSMDDPVINKDMRDTDMSXXXXXXXXXXXXXXXSVADGSEDSGSQSDMSKLLADQSFV 360
           LAMSMDDP +  D+RDTDMS               SVAD + D  SQSD+++LLADQS V
Sbjct: 296 LAMSMDDPAVGHDVRDTDMSEASTDDPELALALQLSVADSTGDQASQSDVTRLLADQSRV 355

Query: 361 SSILASLPGVDPNDPSVKDLLASMQNQSEPQQ 392
           S ILASLPGVD NDPS+KDLLAS+ NQSE Q+
Sbjct: 356 SDILASLPGVDINDPSIKDLLASIPNQSEQQK 387


>Medtr8g075390.1 | 26S proteasome non-ATPase regulatory subunit-like
           protein | HC | chr8:31886017-31879461 | 20130731
          Length = 389

 Score =  515 bits (1327), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 268/389 (68%), Positives = 289/389 (74%), Gaps = 15/389 (3%)

Query: 1   MVLEATMICIDNSEWMRNGDYSPSRFQAQADAVNLICGAKTQSNPENTVGVLTMAGKGVR 60
           MVLEAT+I +DNSE MRNGDYSPSRFQAQ+D V+LICGAKTQSNPENTVGV+TMAGKGVR
Sbjct: 1   MVLEATLIIMDNSEHMRNGDYSPSRFQAQSDTVSLICGAKTQSNPENTVGVMTMAGKGVR 60

Query: 61  VLVTPTSDLGKILACMHGLEIGGEMNLAAGIQVAQLALKHRQNKKQQQRIIVFTGSPIKH 120
           VL TPTSDLGKIL CMHGLEIGGE+NLAA IQVAQLALKHRQNKKQQQRI+VF GSP+KH
Sbjct: 61  VLSTPTSDLGKILGCMHGLEIGGEINLAAAIQVAQLALKHRQNKKQQQRIVVFCGSPVKH 120

Query: 121 EKKMLEMIGRKLKKNSVALDIVNFGEEDEGKTEKLDALLAAVNNNDTSRMAHVPPGPNAL 180
           EKKMLEMIGRKLKKNSVALDIVNFGEEDEGKTEKL+ALL AVNNND+S M HVPPGPNAL
Sbjct: 121 EKKMLEMIGRKLKKNSVALDIVNFGEEDEGKTEKLEALLTAVNNNDSSHMVHVPPGPNAL 180

Query: 181 SDVLISTPIFTXXXXXXXXXXXXXXXXXXXXXVSGYDFGVDPNLDPELALALRVSMXXXX 240
           SDVLISTPIFT                        YDFGVDPNLDPELALALRVSM    
Sbjct: 181 SDVLISTPIFTGDGEGGSGFAAAAAAASAGGVSG-YDFGVDPNLDPELALALRVSMEEER 239

Query: 241 XXX-XXXXXXXXXXXXXXNGGEQQASSQDAAMIERXXXXXXXXXXKTNDMMDDENALLQQ 299
                              GGEQQA+SQDA M ER             + MDDENALLQQ
Sbjct: 240 ARQEAAAKKAAEDASKQEKGGEQQATSQDATMTERTSTEA--------EPMDDENALLQQ 291

Query: 300 ALAMSMDDPVINKDMRDTDMSXXXXXXXXXXXXXXXSVADGSEDSGSQSDMSKLLADQSF 359
           ALAMSMDDP +N D RD DMS               SV+D + D     ++++LLADQSF
Sbjct: 292 ALAMSMDDPAVNHDGRDADMSEAATDDPELARALQLSVSDTTTD-----EVTRLLADQSF 346

Query: 360 VSSILASLPGVDPNDPSVKDLLASMQNQS 388
           VS +LA+LPGVDPNDPSVKDLLASMQNQS
Sbjct: 347 VSHVLATLPGVDPNDPSVKDLLASMQNQS 375