Miyakogusa Predicted Gene

Lj0g3v0281249.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0281249.1 tr|Q9SI42|Q9SI42_ARATH At2g13350 OS=Arabidopsis
thaliana GN=At2g13350 PE=2 SV=1,42.96,4e-18,seg,NULL,44481_g.1
         (149 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g073210.1 | calcium-dependent lipid-binding (CaLB domain) ...   160   3e-40
Medtr1g045780.1 | calcium-dependent lipid-binding (CaLB domain) ...   122   1e-28
Medtr7g115480.1 | calcium-dependent lipid-binding (CaLB domain) ...    55   2e-08

>Medtr1g073210.1 | calcium-dependent lipid-binding (CaLB domain)
           family protein | HC | chr1:32485698-32483650 | 20130731
          Length = 682

 Score =  160 bits (406), Expect = 3e-40,   Method: Composition-based stats.
 Identities = 85/127 (66%), Positives = 91/127 (71%), Gaps = 8/127 (6%)

Query: 1   MRSNLGNIRPVVMTESELGPSPSEVAAVMARRPRIEEGEISTVGGWSLDESVEGLQSKLE 60
           MRSNL N+RPV+MTESELGPSPSEVAA MAR+P I+E E STVGGWSLDESVEGLQSKLE
Sbjct: 537 MRSNLANMRPVIMTESELGPSPSEVAAAMARKPIIDE-ENSTVGGWSLDESVEGLQSKLE 595

Query: 61  RWRTELPPVIDRGEFSSYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSCFSTICGVEC 120
           RWRTELPPVID GE SS+P                            LFSCFS ICGVEC
Sbjct: 596 RWRTELPPVIDHGELSSFP-------TTSSKTSRHSRRHTEGGSGNGLFSCFSNICGVEC 648

Query: 121 SIVCGGD 127
           S+VCGGD
Sbjct: 649 SVVCGGD 655


>Medtr1g045780.1 | calcium-dependent lipid-binding (CaLB domain)
           family protein | HC | chr1:17223842-17222463 | 20130731
          Length = 459

 Score =  122 bits (305), Expect = 1e-28,   Method: Composition-based stats.
 Identities = 66/128 (51%), Positives = 80/128 (62%), Gaps = 3/128 (2%)

Query: 2   RSNLGNIRPVVMTESELGPSPSEVAAVMARRPRIEEGEISTVGGWSLDESVEGLQSKLER 61
           R+N G+ RP++ T+SELGPS SEVA  +AR+P ++EGE S V GWSL+ESVE LQ K+ER
Sbjct: 318 RTNKGHHRPII-TDSELGPSASEVAEAVARQPVMDEGESSIVTGWSLNESVEDLQPKIER 376

Query: 62  WRTELPPVIDRGEFSSYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXLFSCFSTICGVECS 121
           W+T+L PV D  E SS P                            LFSCFS ICG+ECS
Sbjct: 377 WQTDLAPVHDGREMSSKP--TTSSKKKDKHSRRRTNGGGGDGGDNGLFSCFSVICGLECS 434

Query: 122 IVCGGDPK 129
           IVCGGD K
Sbjct: 435 IVCGGDKK 442


>Medtr7g115480.1 | calcium-dependent lipid-binding (CaLB domain)
           family protein | HC | chr7:47725743-47724574 | 20130731
          Length = 389

 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 50/117 (42%), Gaps = 6/117 (5%)

Query: 16  SELGPSPSEVAAVMARR-----PRIEEGEISTVGGWSLDESVEGLQSKLERWRTELPPVI 70
           S++GPSPS VAA +A+      P   + + S VGGWS     EG+ +K+ERWR EL P  
Sbjct: 245 SDVGPSPSVVAAAIAKGLYLMPPPSRKVKSSAVGGWSESNYTEGMDTKIERWRNELTPAY 304

Query: 71  DRGEFSSYPXXXXXXXXXXXX-XXXXXXXXXXXXXXXXLFSCFSTICGVECSIVCGG 126
           D                                     L SCF T+ G E SI CGG
Sbjct: 305 DEEFEELDEEIKKRMVVAKKTPKRSGKTPGRPMSKKGKLCSCFGTMFGCEFSITCGG 361