Miyakogusa Predicted Gene
- Lj0g3v0281219.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0281219.1 Non Characterized Hit- tr|I1MVR8|I1MVR8_SOYBN
Uncharacterized protein OS=Glycine max PE=3 SV=1,85.78,0,seg,NULL;
POLYPRENYL_SYNTHASE_2,Polyprenyl synthetase;
POLYPRENYL_SYNTHASE_1,Polyprenyl synthetase; ,CUFF.18713.1
(419 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr4g095055.1 | geranylgeranyl pyrophosphate synthase | HC | c... 707 0.0
Medtr4g095055.2 | geranylgeranyl pyrophosphate synthase | HC | c... 501 e-142
Medtr2g072470.1 | solanesyl diphosphate synthase | HC | chr2:305... 234 1e-61
Medtr5g019460.1 | geranylgeranyl pyrophosphate synthase | HC | c... 86 5e-17
Medtr8g078070.1 | geranylgeranyl pyrophosphate synthase | HC | c... 85 1e-16
>Medtr4g095055.1 | geranylgeranyl pyrophosphate synthase | HC |
chr4:39596236-39604873 | 20130731
Length = 417
Score = 707 bits (1824), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 351/420 (83%), Positives = 375/420 (89%), Gaps = 4/420 (0%)
Query: 1 MLFSRISRNLRGSFNSCRWFLSVGDQNHRFLFSHNVQSHTDSTQQVIRSLIFSKGFPALY 60
MLFSRISRNLRG+FN R FLS+G+ N RFLFSH S DST+QV+RSL+FSKG PALY
Sbjct: 1 MLFSRISRNLRGAFNGYRRFLSIGENNRRFLFSH---SPADSTEQVMRSLVFSKGMPALY 57
Query: 61 SSRHQIHHQ-SSPIVEDEHDPFSLVADELSILGNKLREMVVAEVPKLASAAEYFFKMGVE 119
SSR+ IHH SS +VEDE DPFSLVADELS +GNKLREMVVA+VPKLASAAEYFFKMGVE
Sbjct: 58 SSRYHIHHHTSSSLVEDELDPFSLVADELSFIGNKLREMVVAKVPKLASAAEYFFKMGVE 117
Query: 120 GKRFRPTVLLLMSTALNXXXXXXXXXXXXXXTMTTDLRSRQQRIAEITEMIHVASLLHDD 179
GKRFRPTVLLLMSTALN T TTDLRSRQQRIAEITEMIHVASLLHDD
Sbjct: 118 GKRFRPTVLLLMSTALNLPIPKAPPPMELGGTTTTDLRSRQQRIAEITEMIHVASLLHDD 177
Query: 180 VLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVTG 239
VLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLA+VVEHLVTG
Sbjct: 178 VLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAEVVEHLVTG 237
Query: 240 ETMQMTTTSDQRCSMEYYMEKTYYKTASLISNSCKALAILAGQTAEVAMLAFEYGKNLGL 299
E MQMTTTSDQRCSMEYYMEKTYYKTASLISNSCKA+AILAGQTAEVA+LAFEYGKNLGL
Sbjct: 238 EIMQMTTTSDQRCSMEYYMEKTYYKTASLISNSCKAIAILAGQTAEVAVLAFEYGKNLGL 297
Query: 300 AFQLIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAMEEFPQLRAIVEDGFENPENVD 359
AFQLIDDVLDFTGTSASLGKGSLSDI+HGIVTAPILFAMEEFPQLRAIVE+GFENPENV+
Sbjct: 298 AFQLIDDVLDFTGTSASLGKGSLSDIQHGIVTAPILFAMEEFPQLRAIVEEGFENPENVN 357
Query: 360 LALEYLGKSRGIQRTKELXXXXXXXXXXXIDSLPESDDEEVRRSRKALIDLTHIVITRTK 419
+AL+YLGKSRGIQ+TKEL IDSLPE+D+EEVR+SRKAL++LT IVITRTK
Sbjct: 358 IALDYLGKSRGIQKTKELAMKHASLAAEAIDSLPENDNEEVRKSRKALVELTQIVITRTK 417
>Medtr4g095055.2 | geranylgeranyl pyrophosphate synthase | HC |
chr4:39596236-39604873 | 20130731
Length = 490
Score = 501 bits (1291), Expect = e-142, Method: Compositional matrix adjust.
Identities = 253/302 (83%), Positives = 266/302 (88%), Gaps = 4/302 (1%)
Query: 1 MLFSRISRNLRGSFNSCRWFLSVGDQNHRFLFSHNVQSHTDSTQQVIRSLIFSKGFPALY 60
MLFSRISRNLRG+FN R FLS+G+ N RFLFSH S DST+QV+RSL+FSKG PALY
Sbjct: 1 MLFSRISRNLRGAFNGYRRFLSIGENNRRFLFSH---SPADSTEQVMRSLVFSKGMPALY 57
Query: 61 SSRHQIHHQ-SSPIVEDEHDPFSLVADELSILGNKLREMVVAEVPKLASAAEYFFKMGVE 119
SSR+ IHH SS +VEDE DPFSLVADELS +GNKLREMVVA+VPKLASAAEYFFKMGVE
Sbjct: 58 SSRYHIHHHTSSSLVEDELDPFSLVADELSFIGNKLREMVVAKVPKLASAAEYFFKMGVE 117
Query: 120 GKRFRPTVLLLMSTALNXXXXXXXXXXXXXXTMTTDLRSRQQRIAEITEMIHVASLLHDD 179
GKRFRPTVLLLMSTALN T TTDLRSRQQRIAEITEMIHVASLLHDD
Sbjct: 118 GKRFRPTVLLLMSTALNLPIPKAPPPMELGGTTTTDLRSRQQRIAEITEMIHVASLLHDD 177
Query: 180 VLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVTG 239
VLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLA+VVEHLVTG
Sbjct: 178 VLDDADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAEVVEHLVTG 237
Query: 240 ETMQMTTTSDQRCSMEYYMEKTYYKTASLISNSCKALAILAGQTAEVAMLAFEYGKNLGL 299
E MQMTTTSDQRCSMEYYMEKTYYKTASLISNSCKA+AILAGQTAEVA+LAFEYGKNL
Sbjct: 238 EIMQMTTTSDQRCSMEYYMEKTYYKTASLISNSCKAIAILAGQTAEVAVLAFEYGKNLVC 297
Query: 300 AF 301
F
Sbjct: 298 IF 299
Score = 208 bits (530), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 99/122 (81%), Positives = 110/122 (90%)
Query: 298 GLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAMEEFPQLRAIVEDGFENPEN 357
GLAFQLIDDVLDFTGTSASLGKGSLSDI+HGIVTAPILFAMEEFPQLRAIVE+GFENPEN
Sbjct: 369 GLAFQLIDDVLDFTGTSASLGKGSLSDIQHGIVTAPILFAMEEFPQLRAIVEEGFENPEN 428
Query: 358 VDLALEYLGKSRGIQRTKELXXXXXXXXXXXIDSLPESDDEEVRRSRKALIDLTHIVITR 417
V++AL+YLGKSRGIQ+TKEL IDSLPE+D+EEVR+SRKAL++LT IVITR
Sbjct: 429 VNIALDYLGKSRGIQKTKELAMKHASLAAEAIDSLPENDNEEVRKSRKALVELTQIVITR 488
Query: 418 TK 419
TK
Sbjct: 489 TK 490
>Medtr2g072470.1 | solanesyl diphosphate synthase | HC |
chr2:30511132-30506990 | 20130731
Length = 421
Score = 234 bits (597), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 139/393 (35%), Positives = 220/393 (55%), Gaps = 34/393 (8%)
Query: 9 NLRGSFNSCRWFLSVGDQN-HRFLFSH--NVQSHTDSTQQVIRSLIFS---KGFPALYSS 62
N +G N R + +N H++ S + + Q I+ L K +PA S
Sbjct: 39 NSKGCGNGARKLVCCKKRNTHQYRVSSMDTAEPTLNGGTQAIKDLAKGLNLKSYPATPIS 98
Query: 63 RHQIHHQSSPIVEDEHDPFSLVADELSILGNKLREMVVAEVPKLASAAEYFFKMGVEGKR 122
+++ F +V+D+L L L+ +V AE P L SAAE F G GKR
Sbjct: 99 PNRL--------------FEVVSDDLLTLNKNLQSIVGAENPVLISAAEQIFSAG--GKR 142
Query: 123 FRPTVLLLMSTALNXXXXXXXXXXXXXXTMTTDLRSRQQRIAEITEMIHVASLLHDDVLD 182
RP ++ L+S A DL + +R+AEI EMIH ASL+HDDVLD
Sbjct: 143 MRPALVFLVSRA------------TAELHGLEDLTVKHRRLAEIVEMIHTASLIHDDVLD 190
Query: 183 DADTRRGIGSLNFVMGNKLAVLAGDFLLSRACVALASLKNTEVVSLLAKVVEHLVTGETM 242
++D RRG +++ + G ++AVLAGDF+ +++ LA+L+N EV+ L+++V++ +GE
Sbjct: 191 ESDLRRGKETVHQMFGTRVAVLAGDFMFAQSSWYLANLENIEVIKLISQVIKDFASGEIK 250
Query: 243 QMTTTSDQRCSMEYYMEKTYYKTASLISNSCKALAILAGQTAEVAMLAFEYGKNLGLAFQ 302
Q ++ D ++ Y+ K+Y+KTASLI+ S K A+ +G + + FEYGKNLGL+FQ
Sbjct: 251 QASSLFDCDVQLDEYLIKSYFKTASLIAASVKGAAVFSGSDSSMTEKMFEYGKNLGLSFQ 310
Query: 303 LIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAMEEFPQLRAIVEDGFENPENVDLAL 362
++DD+LDFT ++ LGK + +D+ G +TAP++FA+E+ P+LR I+E F ++D A+
Sbjct: 311 VVDDILDFTQSAEQLGKPAGTDLAKGNLTAPVIFALEKEPKLRDIIESEFSEIGSLDEAI 370
Query: 363 EYLGKSRGIQRTKELXXXXXXXXXXXIDSLPES 395
+ + GI+R +EL + LP S
Sbjct: 371 KLVKSCGGIERAQELAKEKADLAIQSLQCLPPS 403
>Medtr5g019460.1 | geranylgeranyl pyrophosphate synthase | HC |
chr5:7341789-7340535 | 20130731
Length = 371
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 126/267 (47%), Gaps = 32/267 (11%)
Query: 86 DELSILGNKLREMVVAEVP-KLASAAEYFFKMGVEGKRFRPTVLLLMSTALNXXXXXXXX 144
++ +I+ L E +V + P K+ A Y G GKR RP VL + + L
Sbjct: 86 EKANIVNKALDEAIVLQEPEKIYEAMRYSLLAG--GKRVRP-VLCIAACGLVGGKEEASI 142
Query: 145 XXXXXXTMTTDLRSRQQRIAEITEMIHVASLLHDDV--LDDADTRRGIGSLNFVMGNKLA 202
A EMIH SL+HDD+ +D+ D RRG + + V G +A
Sbjct: 143 PS-----------------ACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTNHKVYGEDVA 185
Query: 203 VLAGDFLLSRAC--VALASL-----KNTEVVSLLAKVV--EHLVTGETMQMTTTSDQRCS 253
VLAGD LLS A VA++++ + ++ LAK V E LV G+ + + +
Sbjct: 186 VLAGDALLSFAFEHVAVSTIGVPPERIVRAIAELAKAVGKEGLVAGQIVDLESEGKSNVG 245
Query: 254 MEYYMEKTYYKTASLISNSCKALAILAGQTAEVAMLAFEYGKNLGLAFQLIDDVLDFTGT 313
+E KTA+L+ + AI+ G T + ++ + +GL FQ++DD+LD T +
Sbjct: 246 LETLEFIHLRKTAALLEAAVVMGAIVGGGTEDEIEKLRKFARYIGLLFQVVDDILDVTKS 305
Query: 314 SASLGKGSLSDIRHGIVTAPILFAMEE 340
S LGK + D+ T P L +E+
Sbjct: 306 SEELGKTAGKDLTADKATYPKLLGLEK 332
>Medtr8g078070.1 | geranylgeranyl pyrophosphate synthase | HC |
chr8:33275574-33277440 | 20130731
Length = 372
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 129/288 (44%), Gaps = 36/288 (12%)
Query: 69 QSSPIVEDEHDPF----SLVADELSILGNKLREMVVAEVP-KLASAAEYFFKMGVEGKRF 123
+ PI +E +P S + ++ + + L + V P K+ A Y G GKR
Sbjct: 66 KQEPIEAEEQNPIFNFKSYMIEKATRVNKALDDAVSLREPLKVHEAMRYSLLAG--GKRV 123
Query: 124 RPTVLLLMSTALNXXXXXXXXXXXXXXTMTTDLRSRQQRIAEITEMIHVASLLHDDV--L 181
RP VL L + L A EMIH SL+HDD+ +
Sbjct: 124 RP-VLCLAACEL-----------------VGGTEPMAMPAACAVEMIHTMSLIHDDLPCM 165
Query: 182 DDADTRRGIGSLNFVMGNKLAVLAGDFLLSRA-------CVALASLKNTEVVSLLAKVV- 233
D+ D RRG + + V G +AVLAGD LL+ A V ++ + + LAK +
Sbjct: 166 DNDDLRRGKPTNHKVFGEDVAVLAGDALLAFAFEHIAVSTVDVSPARIVRAIGELAKSIG 225
Query: 234 -EHLVTGETMQMTTTSDQRCSMEYYMEKTYYKTASLISNSCKALAILAGQTAEVAMLAFE 292
E LV G+ + + + +E +KTA+L+ + AIL G + E +
Sbjct: 226 SEGLVAGQVVDINSEGLSDVGLERLEFIHLHKTAALLEGAVVLGAILGGGSDEDVEKLRK 285
Query: 293 YGKNLGLAFQLIDDVLDFTGTSASLGKGSLSDIRHGIVTAPILFAMEE 340
+ +GL FQ++DD+LD T +S LGK + D+ VT P L +E+
Sbjct: 286 FATYIGLLFQVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLLGIEK 333