Miyakogusa Predicted Gene

Lj0g3v0280999.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0280999.1 tr|B4DPS2|B4DPS2_HUMAN cDNA FLJ55128 OS=Homo
sapiens PE=2 SV=1,28.4,8e-19,UNCHARACTERIZED,Uncharacterised protein
family UPF0406; seg,NULL; HVSL,Uncharacterised protein
famil,CUFF.18684.1
         (282 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0053s0020.1 | U6 snRNA phosphodiesterase-like protein, puta...   400   e-112
Medtr0092s0090.1 | ABC1 family protein | HC | scaffold0092:40395...   246   2e-65

>Medtr0053s0020.1 | U6 snRNA phosphodiesterase-like protein,
           putative | HC | scaffold0053:5359-11363 | 20130731
          Length = 301

 Score =  400 bits (1028), Expect = e-112,   Method: Compositional matrix adjust.
 Identities = 187/234 (79%), Positives = 210/234 (89%)

Query: 48  FHGPQDLQIGETIRVRSFPHADGNYALHVYIPVNISSQSKKEIAGILKKVSSREPTLYVV 107
           F GPQD+QI +T +VRSFPH DGNYALHVYIP+NISS SKKE+A  LKK+SS  P+L  V
Sbjct: 67  FLGPQDIQISQTTKVRSFPHVDGNYALHVYIPINISSSSKKEVAAFLKKISSLHPSLCAV 126

Query: 108 DVDVPLNTLCKNDEKLEQVALGREFHISLGRTVPIRVHQIDSMVSMLRQKLQSHHNFWID 167
           DVDVPLN LCKNDEKLEQV LGREFHISLGRTVPIRVHQIDS+V+ML+QKLQ+   +WID
Sbjct: 127 DVDVPLNVLCKNDEKLEQVLLGREFHISLGRTVPIRVHQIDSVVTMLKQKLQTQSLYWID 186

Query: 168 FNKWEVFVNDDHTRTFISLEVVQGGLVEIKKQIEAVNAIYKLHNLPEFYKDPRPHISLAW 227
           F+KWEVFVNDD TRTF+S+EVV GGLVEI+KQIEAVNAIYKLHNLPEFY+DPRPHISLAW
Sbjct: 187 FDKWEVFVNDDRTRTFLSVEVVHGGLVEIRKQIEAVNAIYKLHNLPEFYEDPRPHISLAW 246

Query: 228 ALGDITHSLKKVVDEEIKQCVVGKSLKKCIFNCKFKGIECKIGKKSYKICKISD 281
           +LGD   SLKKVVD+EI +CV GKSLKKCIF CKFKGIECKIG+K++KICKISD
Sbjct: 247 SLGDTADSLKKVVDDEIMKCVTGKSLKKCIFTCKFKGIECKIGQKTFKICKISD 300


>Medtr0092s0090.1 | ABC1 family protein | HC |
           scaffold0092:40395-45757 | 20130731
          Length = 342

 Score =  246 bits (627), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 115/148 (77%), Positives = 130/148 (87%)

Query: 48  FHGPQDLQIGETIRVRSFPHADGNYALHVYIPVNISSQSKKEIAGILKKVSSREPTLYVV 107
           F GPQD+QI +T +VRSFPH DGNYALHVYIP+NISS SKKE+A  LKK+SS  P+L  V
Sbjct: 67  FLGPQDIQIRQTTKVRSFPHVDGNYALHVYIPINISSSSKKEVAAFLKKISSLHPSLCAV 126

Query: 108 DVDVPLNTLCKNDEKLEQVALGREFHISLGRTVPIRVHQIDSMVSMLRQKLQSHHNFWID 167
           DVDVPLN LCKNDEKLEQV LGREFHISLGRTVPIRVHQIDS+VSML+QKLQ+   +WI+
Sbjct: 127 DVDVPLNVLCKNDEKLEQVLLGREFHISLGRTVPIRVHQIDSVVSMLKQKLQTQPFYWIN 186

Query: 168 FNKWEVFVNDDHTRTFISLEVVQGGLVE 195
           F+KWEVFVNDD TRTF+S+EVV GGLVE
Sbjct: 187 FDKWEVFVNDDRTRTFLSVEVVHGGLVE 214