Miyakogusa Predicted Gene

Lj0g3v0280889.2
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0280889.2 Non Characterized Hit- tr|F6HV53|F6HV53_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,40,4e-19,seg,NULL; SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,CUFF.18685.2
         (224 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g037270.1 | plant/F14N23-31 protein | HC | chr5:16296142-1...   197   7e-51
Medtr6g009410.1 | plant/F14N23-31 protein | HC | chr6:2781660-27...    48   7e-06

>Medtr5g037270.1 | plant/F14N23-31 protein | HC |
           chr5:16296142-16300981 | 20130731
          Length = 489

 Score =  197 bits (501), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 126/221 (57%), Positives = 139/221 (62%), Gaps = 40/221 (18%)

Query: 1   MGACVSTPQGCVXXXXXXXXXXXXXXXXXXXXXVCCRLYKKGKGSSLD--KVDVPG--DR 56
           MGACVST QGCV                     +  R     + SSLD  KVD+P     
Sbjct: 1   MGACVSTQQGCVGGRFKKKNRKRKRI-------IGFRRRVSSQFSSLDNNKVDLPSLPQH 53

Query: 57  SFANNPTFQAGSIIEEAWFDSVAVFESDCDDDYQSVPDDVVSLNGIE--SISSFASSRDG 114
           SF N PTFQ    IEEAWFDSV VF+SDCDDDYQSVPDDVVSLNGIE  S+SSF  SRD 
Sbjct: 54  SFTN-PTFQGS--IEEAWFDSVTVFDSDCDDDYQSVPDDVVSLNGIEGGSVSSFPHSRDA 110

Query: 115 NQVSTDQVQKTKELLSRGYSGNISEAARISDVQHSSVDVIDSQCKCDRNIVEGNEPVFLD 174
           NQ      QK           NISEAAR SDVQH  VD          N++E  EPVFLD
Sbjct: 111 NQS-----QKP----------NISEAARSSDVQHVGVD---------GNMIEVTEPVFLD 146

Query: 175 EISSVDANSIKEDGILDNCGILPNNCLPCLASTVPSIEKRR 215
           +ISSVDANS K++GILDNCGI+PNNCLPCLAST+PS+EKRR
Sbjct: 147 DISSVDANSNKDEGILDNCGIIPNNCLPCLASTIPSLEKRR 187


>Medtr6g009410.1 | plant/F14N23-31 protein | HC |
           chr6:2781660-2786234 | 20130731
          Length = 442

 Score = 47.8 bits (112), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 26/50 (52%), Positives = 35/50 (70%), Gaps = 5/50 (10%)

Query: 171 VFLDEISSVDANSIKEDGIL----DNCGILPNNCLPCLASTVPS-IEKRR 215
           V+  EIS+  A+   E+ IL    D+CGILPNNCLPCL+S+ P  +EK+R
Sbjct: 82  VYDGEISATHADENGEERILTLTPDHCGILPNNCLPCLSSSNPPVVEKKR 131