Miyakogusa Predicted Gene

Lj0g3v0280759.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0280759.1 Non Characterized Hit- tr|D8QYZ8|D8QYZ8_SELML
Putative uncharacterized protein OS=Selaginella
moelle,61.33,1e-18,Cmc1,Cytochrome c oxidase biogenesis protein
Cmc1-like,CUFF.18668.1
         (181 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr0024s0060.1 | cytochrome C oxidase biogenesis Cmc1-like pro...   149   1e-36

>Medtr0024s0060.1 | cytochrome C oxidase biogenesis Cmc1-like
           protein | LC | scaffold0024:22194-17445 | 20130731
          Length = 144

 Score =  149 bits (377), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 72/85 (84%), Positives = 75/85 (88%)

Query: 90  GYIQDARENHVKKKEEEALRSKMKQKALKQCDRYTAKYAECASGRTLSVVWQCRQQAKEL 149
           GYIQ+ARENHVKKK EEALRSKMK KALK+CD YT KYAECA GRTLSVVWQCR+ AKEL
Sbjct: 60  GYIQEARENHVKKKVEEALRSKMKVKALKECDYYTKKYAECAMGRTLSVVWQCRKVAKEL 119

Query: 150 NECLHHFTNDSVLEEMKKAYMLKQG 174
           N CLH FTNDSVLEEMKK Y LKQG
Sbjct: 120 NSCLHQFTNDSVLEEMKKEYNLKQG 144