Miyakogusa Predicted Gene
- Lj0g3v0279449.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0279449.1 tr|A2Q1B8|A2Q1B8_MEDTR Homeobox domain, ZF-HD
class; ZF-HD homeobox protein Cys/His-rich dimerisatio,58.01,0,no
description,Homeodomain-like; Homeodomain-like,Homeodomain-like;
homeo_ZF_HD: homeobox domain, ZF,CUFF.18585.1
(260 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr7g010300.1 | homeobox domain, ZF-HD class protein | HC | ch... 122 4e-28
Medtr6g012280.1 | transcription factor HB29-like protein | HC | ... 106 2e-23
Medtr4g134580.1 | homeobox domain, ZF-HD class protein | HC | ch... 88 9e-18
Medtr5g032600.1 | homeobox domain, ZF-HD class protein | HC | ch... 88 9e-18
Medtr1g077020.1 | homeobox domain, ZF-HD class protein | HC | ch... 87 2e-17
Medtr8g467340.1 | homeobox domain, ZF-HD class protein | HC | ch... 85 7e-17
Medtr5g065440.1 | homeobox domain, ZF-HD class protein | HC | ch... 81 9e-16
Medtr3g100650.1 | homeobox domain, ZF-HD class protein | HC | ch... 81 1e-15
Medtr5g020510.1 | homeobox domain, ZF-HD class protein | HC | ch... 78 7e-15
Medtr2g076780.1 | homeobox domain, ZF-HD class protein | LC | ch... 72 4e-13
Medtr8g051480.1 | homeobox domain, ZF-HD class protein | LC | ch... 72 7e-13
Medtr8g069080.1 | homeobox domain, ZF-HD class protein | LC | ch... 70 2e-12
Medtr6g073013.1 | zinc finger homeodomain protein | HC | chr6:27... 67 1e-11
Medtr8g069380.1 | homeobox domain, ZF-HD class protein | LC | ch... 67 2e-11
>Medtr7g010300.1 | homeobox domain, ZF-HD class protein | HC |
chr7:2495416-2494003 | 20130731
Length = 341
Score = 122 bits (305), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 77/175 (44%), Positives = 91/175 (52%), Gaps = 37/175 (21%)
Query: 98 MLLALSTGLAAPPENAAGPXXXXXXXXXXXX---------XQEQKEKMLKFAERVGWKMQ 148
MLLALS L PEN A P Q+QK+KMLKFAE+VGWKMQ
Sbjct: 191 MLLALSAAL---PENVAAPNQTMLMNSHSNNSRKRFRTKFTQDQKDKMLKFAEKVGWKMQ 247
Query: 149 KKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGKRDGSXXXXXXXXXXXXXXAGSAKSFF 208
KKD++FV +FCNEIG++R VLKVWMHNNKNT KR+ KSF
Sbjct: 248 KKDDEFVHEFCNEIGVDRSVLKVWMHNNKNTLAKRENI--------NTNNDINDGVKSF- 298
Query: 209 AKENHDPVITNISSASEINGNGNRNHGAEDPIHHHFQNDG---GATVRANGSSSS 260
+ E + N HG H+H+QN+G G TVRANGSSSS
Sbjct: 299 ----------QLPLEDEEHKNNVEIHGLN---HNHYQNEGGVVGVTVRANGSSSS 340
>Medtr6g012280.1 | transcription factor HB29-like protein | HC |
chr6:3684710-3683161 | 20130731
Length = 333
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 63/96 (65%), Gaps = 10/96 (10%)
Query: 98 MLLALS---TGLAAPPENAAGPXXXXXXXXXXXX-------XQEQKEKMLKFAERVGWKM 147
MLLALS GL+ PPEN A P QEQKEKM +FA++VGWKM
Sbjct: 189 MLLALSGAGVGLSIPPENTAAPLNHLSSPMGTSRKRFRTKFTQEQKEKMHEFADKVGWKM 248
Query: 148 QKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGKR 183
QK+DE+ V FCNE+G++R VLKVWMHNNKNT G++
Sbjct: 249 QKRDEEMVNGFCNEVGVDRSVLKVWMHNNKNTLGRK 284
>Medtr4g134580.1 | homeobox domain, ZF-HD class protein | HC |
chr4:56377888-56378985 | 20130731
Length = 365
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 37/54 (68%), Positives = 44/54 (81%)
Query: 130 QEQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGKR 183
QEQKEKML FAE+VGWK QK++E VQ FC EIG++R VLKVWMHNNK+ K+
Sbjct: 293 QEQKEKMLNFAEKVGWKFQKQEESVVQQFCQEIGVKRRVLKVWMHNNKHNLAKK 346
>Medtr5g032600.1 | homeobox domain, ZF-HD class protein | HC |
chr5:14022399-14021147 | 20130731
Length = 272
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 36/54 (66%), Positives = 47/54 (87%)
Query: 130 QEQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGKR 183
QEQK+KML+ AE++GW++QK DE VQ+FCNE G++R VLKVWMHNNK+T GK+
Sbjct: 218 QEQKDKMLELAEKLGWRIQKHDEGLVQEFCNESGVKRHVLKVWMHNNKHTLGKK 271
>Medtr1g077020.1 | homeobox domain, ZF-HD class protein | HC |
chr1:34371555-34370690 | 20130731
Length = 191
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 46/57 (80%)
Query: 130 QEQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGKRDGS 186
+EQKEKML FAE+ W++QK +E VQ FC EIGI+R +LKVWMHNNKNTF KR+ S
Sbjct: 133 KEQKEKMLCFAEKAEWRIQKLEESVVQKFCQEIGIKRRILKVWMHNNKNTFAKRNLS 189
>Medtr8g467340.1 | homeobox domain, ZF-HD class protein | HC |
chr8:24180617-24182295 | 20130731
Length = 391
Score = 85.1 bits (209), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 41/49 (83%)
Query: 130 QEQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKN 178
+EQKEKM F+E++GWKMQK D+ VQ FCNEIG+ RGV KVWMHNNKN
Sbjct: 280 KEQKEKMHGFSEKLGWKMQKSDDGLVQKFCNEIGVSRGVFKVWMHNNKN 328
>Medtr5g065440.1 | homeobox domain, ZF-HD class protein | HC |
chr5:27507932-27508738 | 20130731
Length = 268
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 43/54 (79%)
Query: 130 QEQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGKR 183
QEQKEK+L FAE GW++QK+DE ++ FC E I+R VLKVWMHNNKNT GK+
Sbjct: 214 QEQKEKLLAFAEEHGWRIQKQDEAAIEQFCAENCIKRNVLKVWMHNNKNTLGKK 267
>Medtr3g100650.1 | homeobox domain, ZF-HD class protein | HC |
chr3:46301626-46300635 | 20130731
Length = 274
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 34/54 (62%), Positives = 45/54 (83%)
Query: 130 QEQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGKR 183
QEQK+KML FAE++GW++QK+DE ++ FC E I+R VLKVWMHNNK+T GK+
Sbjct: 220 QEQKDKMLAFAEKIGWRIQKEDEGAIEQFCAENFIKRHVLKVWMHNNKHTLGKK 273
>Medtr5g020510.1 | homeobox domain, ZF-HD class protein | HC |
chr5:7836628-7838042 | 20130731
Length = 297
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 44/54 (81%)
Query: 130 QEQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGKR 183
Q+QK+KM++FAE++GWK+QK DE VQ FC+++GI+R V KV+MHNNK K+
Sbjct: 242 QQQKDKMMEFAEKIGWKIQKHDEQEVQQFCSQVGIKRQVFKVFMHNNKQAMKKQ 295
>Medtr2g076780.1 | homeobox domain, ZF-HD class protein | LC |
chr2:32143099-32142386 | 20130731
Length = 237
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 42/54 (77%)
Query: 130 QEQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGKR 183
+QKE+ML FA + GWK+ K+DE+ V++FCNEIG++ +VWM+NNK+T G +
Sbjct: 183 HDQKERMLGFAMKSGWKIHKQDENVVEEFCNEIGVKCKTFRVWMYNNKHTLGNK 236
>Medtr8g051480.1 | homeobox domain, ZF-HD class protein | LC |
chr8:19124866-19125302 | 20130731
Length = 128
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/54 (57%), Positives = 44/54 (81%), Gaps = 1/54 (1%)
Query: 130 QEQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGKR 183
EQ++KML FA +GWK++K DE+ V++FCNEI ++R V KVWM+NNK+T GK+
Sbjct: 76 HEQRKKMLDFAMTLGWKIKKNDEN-VEEFCNEIAVKRCVFKVWMYNNKHTHGKK 128
>Medtr8g069080.1 | homeobox domain, ZF-HD class protein | LC |
chr8:28906092-28905286 | 20130731
Length = 268
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 40/52 (76%)
Query: 132 QKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGKR 183
QKE+ML FA + GWK+ K+DE+ V+ FCNEIG++ +VWM+NNK+T G +
Sbjct: 216 QKERMLGFAMKSGWKINKQDENLVEQFCNEIGVKCKTFRVWMYNNKHTHGNK 267
>Medtr6g073013.1 | zinc finger homeodomain protein | HC |
chr6:27099329-27098575 | 20130731
Length = 179
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 40/50 (80%), Gaps = 1/50 (2%)
Query: 131 EQKEKMLKFAERVGWKMQKKDEDF-VQDFCNEIGIERGVLKVWMHNNKNT 179
+QKEKM+ FAE++GWK+Q+K+ D ++ FC +G+ R V KVWMHN+KN+
Sbjct: 111 DQKEKMMGFAEKLGWKLQRKELDEEIERFCESVGVSRQVFKVWMHNHKNS 160
>Medtr8g069380.1 | homeobox domain, ZF-HD class protein | LC |
chr8:29047888-29048449 | 20130731
Length = 115
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 131 EQKEKMLKFAERVGWKMQKKDEDFVQDFCNEIGIERGVLKVWMHNNKNTFGKR 183
EQ+EKML FA GWK+QK+DE+ V++F NEIG++ V K W+ NNK+T GK+
Sbjct: 62 EQREKMLDFAGARGWKIQKRDENVVKEFRNEIGVKLQVFKAWVQNNKHTLGKK 114