Miyakogusa Predicted Gene

Lj0g3v0278519.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0278519.1 Non Characterized Hit- tr|B8BJN6|B8BJN6_ORYSI
Putative uncharacterized protein OS=Oryza sativa
subsp,73.68,0.000000000000001,seg,NULL;
UNCHARACTERIZED,NULL,CUFF.18524.1
         (209 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g053360.1 | tubulin-binding cofactor C domain protein | HC...   206   1e-53
Medtr7g092810.2 | tubulin-binding cofactor C domain protein | HC...   199   1e-51
Medtr7g092810.1 | tubulin-binding cofactor C domain protein | HC...   199   1e-51
Medtr7g078290.1 | hypothetical protein | LC | chr7:29598541-2959...    60   2e-09
Medtr8g032090.1 | microtubule associated protein, MAP65/ASE1 fam...    56   2e-08

>Medtr1g053360.1 | tubulin-binding cofactor C domain protein | HC |
           chr1:22415727-22424596 | 20130731
          Length = 553

 Score =  206 bits (525), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 112/166 (67%), Positives = 125/166 (75%), Gaps = 9/166 (5%)

Query: 24  FEHGLLPIPKLIFSDPTQTLTTFKHKLLHDXXXXXXXXXXXXXESLQIPLDHANLLLDTL 83
           FEHGL+PIPKLIFSDPTQ+L T K  LL               +SLQI  +HA LLLDTL
Sbjct: 23  FEHGLIPIPKLIFSDPTQSLLTLKQTLLASSSNNLISSAIIS-DSLQISTEHAQLLLDTL 81

Query: 84  ASVHHSPSDPLVRAEPGRNDAVGADVHDLLLLLYIQSYKKLLPRSHKDAAAAVADVWPST 143
           +SV H  +D +        D    DV+DL+LLLYIQSYKKLLPRS+KD A+ VADVWPST
Sbjct: 82  SSVVHHENDVVF-------DGAECDVYDLILLLYIQSYKKLLPRSNKDPAS-VADVWPST 133

Query: 144 SAFDGYLSALSPLQLVRSNSRRFVPSQADEEAHQLSYLQKHLANIL 189
           SAFDGY SALSPLQL+RSNSRRF+PSQADEEAHQLSYLQKHLANIL
Sbjct: 134 SAFDGYFSALSPLQLMRSNSRRFMPSQADEEAHQLSYLQKHLANIL 179


>Medtr7g092810.2 | tubulin-binding cofactor C domain protein | HC |
           chr7:36822281-36832151 | 20130731
          Length = 558

 Score =  199 bits (506), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 110/166 (66%), Positives = 126/166 (75%), Gaps = 11/166 (6%)

Query: 24  FEHGLLPIPKLIFSDPTQTLTTFKHKLLHDXXXXXXXXXXXXXESLQIPLDHANLLLDTL 83
           FEHGLLPIPKLIFSDP QTL +FKHKLL +             ESLQI ++ A L+LDTL
Sbjct: 30  FEHGLLPIPKLIFSDPAQTLISFKHKLL-ESSSNNRVGSVAISESLQISVEQAKLVLDTL 88

Query: 84  ASVHHSPSDPLVRAEPGRNDAVGADVHDLLLLLYIQSYKKLLPRSHKDAAAAVADVWPST 143
           ASV               +++   DV+DL+L LY+QSYK+LLPR+HKD+AA VADVWPST
Sbjct: 89  ASV---------LPSESDSESDSVDVNDLVLFLYVQSYKRLLPRTHKDSAA-VADVWPST 138

Query: 144 SAFDGYLSALSPLQLVRSNSRRFVPSQADEEAHQLSYLQKHLANIL 189
           SAFDGYLSALSPLQLVRSNS+RF PSQADEEAHQLSYLQKHLANI+
Sbjct: 139 SAFDGYLSALSPLQLVRSNSKRFTPSQADEEAHQLSYLQKHLANIV 184


>Medtr7g092810.1 | tubulin-binding cofactor C domain protein | HC |
           chr7:36822281-36832151 | 20130731
          Length = 558

 Score =  199 bits (506), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 110/166 (66%), Positives = 126/166 (75%), Gaps = 11/166 (6%)

Query: 24  FEHGLLPIPKLIFSDPTQTLTTFKHKLLHDXXXXXXXXXXXXXESLQIPLDHANLLLDTL 83
           FEHGLLPIPKLIFSDP QTL +FKHKLL +             ESLQI ++ A L+LDTL
Sbjct: 30  FEHGLLPIPKLIFSDPAQTLISFKHKLL-ESSSNNRVGSVAISESLQISVEQAKLVLDTL 88

Query: 84  ASVHHSPSDPLVRAEPGRNDAVGADVHDLLLLLYIQSYKKLLPRSHKDAAAAVADVWPST 143
           ASV               +++   DV+DL+L LY+QSYK+LLPR+HKD+AA VADVWPST
Sbjct: 89  ASV---------LPSESDSESDSVDVNDLVLFLYVQSYKRLLPRTHKDSAA-VADVWPST 138

Query: 144 SAFDGYLSALSPLQLVRSNSRRFVPSQADEEAHQLSYLQKHLANIL 189
           SAFDGYLSALSPLQLVRSNS+RF PSQADEEAHQLSYLQKHLANI+
Sbjct: 139 SAFDGYLSALSPLQLVRSNSKRFTPSQADEEAHQLSYLQKHLANIV 184


>Medtr7g078290.1 | hypothetical protein | LC |
           chr7:29598541-29599309 | 20130731
          Length = 114

 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/33 (84%), Positives = 31/33 (93%)

Query: 157 QLVRSNSRRFVPSQADEEAHQLSYLQKHLANIL 189
           +LVRSNS+RF PSQADEEA QLSYLQKHLANI+
Sbjct: 58  KLVRSNSKRFTPSQADEEAPQLSYLQKHLANIV 90


>Medtr8g032090.1 | microtubule associated protein, MAP65/ASE1 family
           protein | LC | chr8:12046185-12050309 | 20130731
          Length = 298

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/30 (86%), Positives = 27/30 (90%)

Query: 156 LQLVRSNSRRFVPSQADEEAHQLSYLQKHL 185
           LQLVRSNS+ F PS ADEEAHQLSYLQKHL
Sbjct: 38  LQLVRSNSKWFTPSHADEEAHQLSYLQKHL 67