Miyakogusa Predicted Gene

Lj0g3v0278359.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0278359.1 Non Characterized Hit- tr|D8RGC4|D8RGC4_SELML
Putative uncharacterized protein OS=Selaginella moelle,33.8,2e-18,GB
DEF: F14N23.28,NULL; FAMILY NOT NAMED,NULL,CUFF.18499.1
         (170 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g111120.1 | exocyst complex component 84B | HC | chr1:5018...   259   9e-70
Medtr6g045363.1 | exocyst complex component 84B | HC | chr6:1629...   258   2e-69
Medtr4g005930.1 | exocyst complex component 84B | HC | chr4:4382...   180   6e-46
Medtr4g083940.1 | plant/F14N23-6 protein | HC | chr4:32655916-32...   105   2e-23

>Medtr1g111120.1 | exocyst complex component 84B | HC |
           chr1:50183616-50188984 | 20130731
          Length = 754

 Score =  259 bits (662), Expect = 9e-70,   Method: Compositional matrix adjust.
 Identities = 128/167 (76%), Positives = 137/167 (82%), Gaps = 1/167 (0%)

Query: 1   MYLSMDDGKVEQPEWFPSPIFQELFGKLTRVAYIATDVFVGRDRFATVLLMRLAETVVLW 60
           MYL M++ K E PEWFPSPIFQELF KLT VA IA+DVFVGR+RFAT+LLMRLAE V+LW
Sbjct: 589 MYLDMEE-KGEIPEWFPSPIFQELFVKLTGVAGIASDVFVGRERFATILLMRLAEAVILW 647

Query: 61  LSEDQAFWEEIEXXXXXXXXXXXXXXYLDMQFVMIFSSQGRYLSRHLHQAIKNIIGRAID 120
           LS+DQ FW  +E              YLDMQFVMIFSSQGRYLSRHLHQAIKNIIGRAID
Sbjct: 648 LSDDQDFWANVETGQTPLGPLGLQQLYLDMQFVMIFSSQGRYLSRHLHQAIKNIIGRAID 707

Query: 121 AVAATGLDPNSVLPEDEWFVEVSEIAIKMLTGKAAFDNVEGDDNSPT 167
           AVAATGLDPNSVLPEDEWFVEVSEI IKM+TG AAFDNVE D  SPT
Sbjct: 708 AVAATGLDPNSVLPEDEWFVEVSEITIKMITGNAAFDNVEEDAYSPT 754


>Medtr6g045363.1 | exocyst complex component 84B | HC |
           chr6:16298312-16292569 | 20130731
          Length = 761

 Score =  258 bits (659), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 128/168 (76%), Positives = 141/168 (83%), Gaps = 3/168 (1%)

Query: 1   MYLSMDDGKVEQPEWFPSPIFQELFGKLTRVAYIATDVFVGRDRFATVLLMRLAETVVLW 60
           MYL M++ K E+PEWFPS IFQELF +LT VA I +DVFVGR+RFAT+LLMRL ETV+LW
Sbjct: 593 MYLGMEE-KGERPEWFPSGIFQELFIRLTEVATIVSDVFVGRERFATILLMRLTETVILW 651

Query: 61  LSEDQAFWEEIEXXXXXXXXXXXXXXYLDMQFVMIFSSQGRYLSRHLHQAIKNIIGRAID 120
           LS+DQAFW++IE              YLDMQFVMIFSSQGRYLSRHLHQAIKNIIGRAID
Sbjct: 652 LSDDQAFWDDIERTPLGPLGLQQL--YLDMQFVMIFSSQGRYLSRHLHQAIKNIIGRAID 709

Query: 121 AVAATGLDPNSVLPEDEWFVEVSEIAIKMLTGKAAFDNVEGDDNSPTA 168
           AVAATGLDPNSVLPEDEWFVEVSEIA+KMLTGKAAFDNV+ D  SPT 
Sbjct: 710 AVAATGLDPNSVLPEDEWFVEVSEIAMKMLTGKAAFDNVDEDAYSPTG 757


>Medtr4g005930.1 | exocyst complex component 84B | HC |
           chr4:438240-428169 | 20130731
          Length = 764

 Score =  180 bits (456), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 90/168 (53%), Positives = 120/168 (71%), Gaps = 1/168 (0%)

Query: 1   MYLSMDDGKVEQPEWFPSPIFQELFGKLTRVAYIATDVFVGRDRFATVLLMRLAETVVLW 60
           MY+SM+    ++ EW PS IFQELF KL R+A IA D+FVGR+RFAT+LLMRL ETV+LW
Sbjct: 582 MYISMERN-ADEVEWIPSLIFQELFIKLNRMANIAADMFVGRERFATLLLMRLTETVILW 640

Query: 61  LSEDQAFWEEIEXXXXXXXXXXXXXXYLDMQFVMIFSSQGRYLSRHLHQAIKNIIGRAID 120
           +SEDQ+FW++IE              YLDM+FV+ F+S GRYLSR+L + +  II +A+ 
Sbjct: 641 ISEDQSFWDDIEEGPRPLGPLGLQQFYLDMKFVVCFASNGRYLSRNLQRIVNEIIRKAMS 700

Query: 121 AVAATGLDPNSVLPEDEWFVEVSEIAIKMLTGKAAFDNVEGDDNSPTA 168
           A +ATG+DP S LPEDEWF E+ + A++ L+GK    N E + +SPTA
Sbjct: 701 AFSATGMDPYSDLPEDEWFNEICQDAMERLSGKPKEINGERELSSPTA 748


>Medtr4g083940.1 | plant/F14N23-6 protein | HC |
           chr4:32655916-32662112 | 20130731
          Length = 773

 Score =  105 bits (263), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 61/141 (43%), Positives = 83/141 (58%), Gaps = 1/141 (0%)

Query: 16  FPSPIFQELFGKLTRVAYIATDVFVGRDRFATVLLMRLAETVVLWLSEDQAFWEEIEXXX 75
            PS  FQ LF KL ++A +A DV +G+++   +LL RL ETVV+WLS++Q FW  +E   
Sbjct: 577 LPSLPFQALFSKLQQLAIVAGDVLLGKEKIQKILLARLTETVVMWLSDEQEFWGVLEDNS 636

Query: 76  XXXXXXXXXXXYLDMQFVMIFSSQGRYLSRHLHQAIKNIIGRAIDAVAATGLDPNSVLPE 135
                       LDM F +  +    Y SRH+HQ    II RAI   +A G++P S LP 
Sbjct: 637 VPLLPLGLHQLILDMHFTVEIARFAGYPSRHVHQIASAIIARAIRTFSARGINPQSALPA 696

Query: 136 DEWFVEVSEIAI-KMLTGKAA 155
           DEWFVE ++ AI K+L G A+
Sbjct: 697 DEWFVETAKSAINKLLLGGAS 717