Miyakogusa Predicted Gene
- Lj0g3v0278299.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0278299.1 CUFF.18494.1
(269 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr5g090430.1 | ATP-dependent RNA helicase, putative | HC | ch... 360 1e-99
Medtr5g090430.2 | ATP-dependent RNA helicase, putative | HC | ch... 358 3e-99
Medtr8g106630.1 | ATP-dependent RNA helicase DHX36-like protein ... 159 2e-39
Medtr8g106630.3 | ATP-dependent RNA helicase DHX36-like protein ... 159 2e-39
Medtr8g106630.5 | ATP-dependent RNA helicase DHX36-like protein ... 159 2e-39
Medtr8g106630.2 | ATP-dependent RNA helicase DHX36-like protein ... 159 2e-39
Medtr8g106630.4 | ATP-dependent RNA helicase DHX36-like protein ... 159 2e-39
Medtr1g109170.2 | ATP-dependent RNA helicase DHX36-like protein ... 153 2e-37
Medtr1g109170.1 | ATP-dependent RNA helicase DHX36-like protein ... 153 2e-37
Medtr1g056490.1 | ATP-dependent RNA helicase | HC | chr1:2472920... 151 6e-37
Medtr8g044260.1 | ATP-dependent RNA helicase DHX36-like protein ... 146 2e-35
Medtr4g134790.1 | ATP-dependent RNA helicase | HC | chr4:5652988... 111 8e-25
Medtr4g134790.2 | ATP-dependent RNA helicase | HC | chr4:5652988... 111 8e-25
Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 96 3e-20
Medtr1g114490.1 | ATP-dependent RNA helicase DHX8 | HC | chr1:51... 95 6e-20
Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA hel... 94 1e-19
Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 94 1e-19
Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA hel... 94 1e-19
Medtr2g098440.1 | Pre-mRNA-splicing factor ATP-dependent RNA hel... 94 1e-19
Medtr1g023985.1 | ATP-dependent RNA helicase DHX8 | HC | chr1:77... 94 2e-19
Medtr1g023985.2 | ATP-dependent RNA helicase DHX8 | HC | chr1:77... 94 2e-19
Medtr3g054400.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 93 3e-19
Medtr1g086640.1 | pre-mRNA splicing factor ATP-dependent RNA hel... 90 3e-18
Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 89 5e-18
Medtr8g080240.3 | pre-mRNA splicing factor ATP-dependent RNA hel... 89 6e-18
Medtr8g080240.1 | pre-mRNA splicing factor ATP-dependent RNA hel... 89 6e-18
Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA hel... 89 6e-18
Medtr8g080240.2 | pre-mRNA splicing factor ATP-dependent RNA hel... 88 7e-18
Medtr6g061840.3 | pre-mRNA-splicing factor ATP-dependent RNA hel... 88 7e-18
Medtr3g052610.1 | Pre-mRNA-splicing factor ATP-dependent RNA hel... 86 5e-17
Medtr4g485610.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 84 2e-16
Medtr1g088590.1 | zinc finger CCCH domain protein | HC | chr1:39... 68 8e-12
Medtr8g041990.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 68 1e-11
Medtr2g015320.1 | ATP-dependent RNA helicase DHX35 | HC | chr2:4... 66 4e-11
Medtr7g095080.1 | ATP-dependent RNA helicase DHX35 | HC | chr7:3... 62 7e-10
Medtr0267s0070.1 | NB-ARC domain disease resistance protein, put... 60 2e-09
Medtr3g014030.1 | helicase, IBR and zinc finger protein | HC | c... 58 1e-08
Medtr4g023590.1 | ATP-dependent RNA helicase DHX37-like protein,... 57 1e-08
Medtr3g086770.1 | helicase, IBR and zinc finger protein | HC | c... 57 1e-08
>Medtr5g090430.1 | ATP-dependent RNA helicase, putative | HC |
chr5:39384456-39392519 | 20130731
Length = 1190
Score = 360 bits (923), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 179/274 (65%), Positives = 214/274 (78%), Gaps = 9/274 (3%)
Query: 1 MWCKGEVCKIVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTT 60
MW KGE CKI+CTQPR ISA+SVSERIS ERGE+ G NVGYKI L+ +GG+QSSI+LCTT
Sbjct: 228 MWGKGETCKILCTQPRRISAMSVSERISRERGEAAGENVGYKIRLDSKGGQQSSIVLCTT 287
Query: 61 EVLLKVLVSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLH 120
VLL+VLVSKGS AKD++S ITHIIMDEIHERDRYSD +LAI+R MLP PHL
Sbjct: 288 GVLLRVLVSKGSRRSMKNPAKDEISDITHIIMDEIHERDRYSDFMLAIMRDMLPLYPHLR 347
Query: 121 LILMGASLDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVLSIVKLGEDNH-----L 175
L+LM A++D RFS+YFG P+I VPG TYPV++YYLEDVLS VK D+
Sbjct: 348 LVLMSATID---TARFSQYFGGCPVIQVPGFTYPVKTYYLEDVLSAVKSSNDDGSTFSIP 404
Query: 176 DSNHELSQEDKISLDKAINLAWSNDDWGPLLEFVFSGGL-NVFNYQHSLTGLNPLMVFAG 234
+NH +S+E K+S D+AINLAWSND+W L E V S +FNYQHSLTGL PLMVFAG
Sbjct: 405 TNNHMISEEHKLSFDEAINLAWSNDEWDLLSELVSSEETPELFNYQHSLTGLTPLMVFAG 464
Query: 235 KGKVGDMCMLLSIGANCHLRTKDGTTALDIAVKE 268
KG++G+MCMLLS GA+C+LR+KDGTTAL+IA +E
Sbjct: 465 KGRIGEMCMLLSFGADCNLRSKDGTTALEIAERE 498
>Medtr5g090430.2 | ATP-dependent RNA helicase, putative | HC |
chr5:39384456-39392519 | 20130731
Length = 1077
Score = 358 bits (919), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 179/274 (65%), Positives = 214/274 (78%), Gaps = 9/274 (3%)
Query: 1 MWCKGEVCKIVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTT 60
MW KGE CKI+CTQPR ISA+SVSERIS ERGE+ G NVGYKI L+ +GG+QSSI+LCTT
Sbjct: 115 MWGKGETCKILCTQPRRISAMSVSERISRERGEAAGENVGYKIRLDSKGGQQSSIVLCTT 174
Query: 61 EVLLKVLVSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLH 120
VLL+VLVSKGS AKD++S ITHIIMDEIHERDRYSD +LAI+R MLP PHL
Sbjct: 175 GVLLRVLVSKGSRRSMKNPAKDEISDITHIIMDEIHERDRYSDFMLAIMRDMLPLYPHLR 234
Query: 121 LILMGASLDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVLSIVKLGEDNH-----L 175
L+LM A++D RFS+YFG P+I VPG TYPV++YYLEDVLS VK D+
Sbjct: 235 LVLMSATID---TARFSQYFGGCPVIQVPGFTYPVKTYYLEDVLSAVKSSNDDGSTFSIP 291
Query: 176 DSNHELSQEDKISLDKAINLAWSNDDWGPLLEFVFSGGL-NVFNYQHSLTGLNPLMVFAG 234
+NH +S+E K+S D+AINLAWSND+W L E V S +FNYQHSLTGL PLMVFAG
Sbjct: 292 TNNHMISEEHKLSFDEAINLAWSNDEWDLLSELVSSEETPELFNYQHSLTGLTPLMVFAG 351
Query: 235 KGKVGDMCMLLSIGANCHLRTKDGTTALDIAVKE 268
KG++G+MCMLLS GA+C+LR+KDGTTAL+IA +E
Sbjct: 352 KGRIGEMCMLLSFGADCNLRSKDGTTALEIAERE 385
>Medtr8g106630.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 105/162 (64%), Gaps = 14/162 (8%)
Query: 3 CKGEVCKIVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEV 62
+G +C I+CTQPR ISAISVSER++ ERGE +G +VGYK+ LE GR + ++ CTT V
Sbjct: 318 ARGSLCNIICTQPRRISAISVSERVAAERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGV 377
Query: 63 LLKVLVSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLI 122
LL+ L+ S L +TH+I+DEIHER D LL +L+ +LP P L LI
Sbjct: 378 LLRRLLVDRS-----------LKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPDLRLI 426
Query: 123 LMGASLDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVL 164
LM A+L+ FS YF P IH+PG T+PVR+ +LED+L
Sbjct: 427 LMSATLNAEL---FSSYFDGAPTIHIPGFTFPVRAQFLEDIL 465
>Medtr8g106630.3 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 105/162 (64%), Gaps = 14/162 (8%)
Query: 3 CKGEVCKIVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEV 62
+G +C I+CTQPR ISAISVSER++ ERGE +G +VGYK+ LE GR + ++ CTT V
Sbjct: 318 ARGSLCNIICTQPRRISAISVSERVAAERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGV 377
Query: 63 LLKVLVSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLI 122
LL+ L+ S L +TH+I+DEIHER D LL +L+ +LP P L LI
Sbjct: 378 LLRRLLVDRS-----------LKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPDLRLI 426
Query: 123 LMGASLDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVL 164
LM A+L+ FS YF P IH+PG T+PVR+ +LED+L
Sbjct: 427 LMSATLNAEL---FSSYFDGAPTIHIPGFTFPVRAQFLEDIL 465
>Medtr8g106630.5 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 105/162 (64%), Gaps = 14/162 (8%)
Query: 3 CKGEVCKIVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEV 62
+G +C I+CTQPR ISAISVSER++ ERGE +G +VGYK+ LE GR + ++ CTT V
Sbjct: 318 ARGSLCNIICTQPRRISAISVSERVAAERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGV 377
Query: 63 LLKVLVSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLI 122
LL+ L+ S L +TH+I+DEIHER D LL +L+ +LP P L LI
Sbjct: 378 LLRRLLVDRS-----------LKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPDLRLI 426
Query: 123 LMGASLDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVL 164
LM A+L+ FS YF P IH+PG T+PVR+ +LED+L
Sbjct: 427 LMSATLNAEL---FSSYFDGAPTIHIPGFTFPVRAQFLEDIL 465
>Medtr8g106630.2 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 105/162 (64%), Gaps = 14/162 (8%)
Query: 3 CKGEVCKIVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEV 62
+G +C I+CTQPR ISAISVSER++ ERGE +G +VGYK+ LE GR + ++ CTT V
Sbjct: 318 ARGSLCNIICTQPRRISAISVSERVAAERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGV 377
Query: 63 LLKVLVSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLI 122
LL+ L+ S L +TH+I+DEIHER D LL +L+ +LP P L LI
Sbjct: 378 LLRRLLVDRS-----------LKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPDLRLI 426
Query: 123 LMGASLDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVL 164
LM A+L+ FS YF P IH+PG T+PVR+ +LED+L
Sbjct: 427 LMSATLNAEL---FSSYFDGAPTIHIPGFTFPVRAQFLEDIL 465
>Medtr8g106630.4 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 159 bits (403), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 105/162 (64%), Gaps = 14/162 (8%)
Query: 3 CKGEVCKIVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEV 62
+G +C I+CTQPR ISAISVSER++ ERGE +G +VGYK+ LE GR + ++ CTT V
Sbjct: 318 ARGSLCNIICTQPRRISAISVSERVAAERGEKLGESVGYKVRLEGMRGRDTRLLFCTTGV 377
Query: 63 LLKVLVSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLI 122
LL+ L+ S L +TH+I+DEIHER D LL +L+ +LP P L LI
Sbjct: 378 LLRRLLVDRS-----------LKGVTHVIVDEIHERGMNEDFLLIVLKDLLPRRPDLRLI 426
Query: 123 LMGASLDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVL 164
LM A+L+ FS YF P IH+PG T+PVR+ +LED+L
Sbjct: 427 LMSATLNAEL---FSSYFDGAPTIHIPGFTFPVRAQFLEDIL 465
>Medtr1g109170.2 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr1:49342716-49360401 | 20130731
Length = 1222
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 111/174 (63%), Gaps = 16/174 (9%)
Query: 5 GEVCKIVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLL 64
G C I+CTQPR ISA+SVSER++ ERGE +G +VGYK+ LE G+ + ++ CTT +LL
Sbjct: 376 GAACNIICTQPRRISAMSVSERVAFERGEKLGESVGYKVRLEGMKGKDTHLLFCTTGILL 435
Query: 65 KVLVSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILM 124
+ L+ A +L +TH+I+DEIHER D LL +L+++LP P L LILM
Sbjct: 436 RRLL-----------ADRNLKGVTHVIVDEIHERGMNEDFLLIVLKELLPHRPELKLILM 484
Query: 125 GASLDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVLSIV--KLGEDNHLD 176
A+LD FS YF PI+++ G T+PVR+ +LE++L I +L N +D
Sbjct: 485 SATLDAEL---FSLYFNGAPIVNILGFTHPVRTLFLENILEITGYRLTPSNQID 535
>Medtr1g109170.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr1:49342716-49360105 | 20130731
Length = 1248
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 111/174 (63%), Gaps = 16/174 (9%)
Query: 5 GEVCKIVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLL 64
G C I+CTQPR ISA+SVSER++ ERGE +G +VGYK+ LE G+ + ++ CTT +LL
Sbjct: 376 GAACNIICTQPRRISAMSVSERVAFERGEKLGESVGYKVRLEGMKGKDTHLLFCTTGILL 435
Query: 65 KVLVSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILM 124
+ L+ A +L +TH+I+DEIHER D LL +L+++LP P L LILM
Sbjct: 436 RRLL-----------ADRNLKGVTHVIVDEIHERGMNEDFLLIVLKELLPHRPELKLILM 484
Query: 125 GASLDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVLSIV--KLGEDNHLD 176
A+LD FS YF PI+++ G T+PVR+ +LE++L I +L N +D
Sbjct: 485 SATLDAEL---FSLYFNGAPIVNILGFTHPVRTLFLENILEITGYRLTPSNQID 535
>Medtr1g056490.1 | ATP-dependent RNA helicase | HC |
chr1:24729204-24739293 | 20130731
Length = 999
Score = 151 bits (382), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/187 (42%), Positives = 112/187 (59%), Gaps = 19/187 (10%)
Query: 4 KGEVCKIVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVL 63
+G C I+CTQPR +SAISV+ RIS ERGE++G VGY I LE + ++ ++ CTT VL
Sbjct: 277 RGADCNIICTQPRRVSAISVAARISAERGETLGKTVGYHIRLEAKRSAETRLLFCTTGVL 336
Query: 64 LKVLVSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLIL 123
L+ LV +L+ ++H+++DEIHER D L+ ILR +LP P L LIL
Sbjct: 337 LRQLVQ-----------DPELTGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLIL 385
Query: 124 MGASLDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVL-----SIVKLGEDNHLDSN 178
M A+++ FS+YF P +H+PG T+PV ++LEDVL SI +D +S
Sbjct: 386 MSATINADL---FSKYFANAPTMHIPGFTFPVVEHFLEDVLEKTRYSIKSESDDIEGNSR 442
Query: 179 HELSQED 185
Q+D
Sbjct: 443 RRKKQQD 449
>Medtr8g044260.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:16995201-16976389 | 20130731
Length = 1148
Score = 146 bits (369), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 79/175 (45%), Positives = 111/175 (63%), Gaps = 16/175 (9%)
Query: 4 KGEVCKIVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVL 63
+G C I+CTQPR ISA++VSER+S ERGES+G VG+K+ LE G+ + ++ CT+ +L
Sbjct: 295 RGAFCSIICTQPRRISAMAVSERVSAERGESLGETVGFKVRLEGMRGKNTHLLFCTSGIL 354
Query: 64 LKVLVSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLIL 123
L+ L+S +LS ITH+ +DEIHER D LL +L+ +LP L L+L
Sbjct: 355 LRRLLS-----------DRNLSGITHVFVDEIHERGMNEDFLLIVLKDLLPRRRDLRLVL 403
Query: 124 MGASLDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVLSIV--KLGEDNHLD 176
M A+L+ FS YFG P H+PG TYPVR+++LEDVL + K+ N +D
Sbjct: 404 MSATLNAEL---FSNYFGGAPTFHIPGFTYPVRAHFLEDVLEMTGYKVTSFNQVD 455
>Medtr4g134790.1 | ATP-dependent RNA helicase | HC |
chr4:56529889-56495557 | 20130731
Length = 1452
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 100/170 (58%), Gaps = 23/170 (13%)
Query: 8 CKIVCTQPRHISAISVSERISCERGE----SIGHNVGYKIPLECRGGRQSSIILCTTEVL 63
C I+CTQPR I+AISV+ER++ ER E S G +GY++ L+ ++ ++ CTT +L
Sbjct: 655 CNIICTQPRRIAAISVAERVADERCEPSPGSDGSLIGYQVRLDSARNEKTRLLFCTTGIL 714
Query: 64 LKVLVSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQML-----PSNPH 118
L+ L+ S L+ ITHII+DE+HER D +L +L+ ++ S+
Sbjct: 715 LRKLMGNRS-----------LTGITHIIVDEVHERSLLGDFILIVLKNLIEKQSSESSSK 763
Query: 119 LHLILMGASLDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVLSIVK 168
+ +ILM A++D FS YFG P++ G T+PV +Y+LEDV +K
Sbjct: 764 VKVILMSATVDSGS---FSSYFGHCPVVTAEGRTHPVTTYFLEDVYDQIK 810
>Medtr4g134790.2 | ATP-dependent RNA helicase | HC |
chr4:56529889-56495557 | 20130731
Length = 1449
Score = 111 bits (277), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/170 (38%), Positives = 100/170 (58%), Gaps = 23/170 (13%)
Query: 8 CKIVCTQPRHISAISVSERISCERGE----SIGHNVGYKIPLECRGGRQSSIILCTTEVL 63
C I+CTQPR I+AISV+ER++ ER E S G +GY++ L+ ++ ++ CTT +L
Sbjct: 655 CNIICTQPRRIAAISVAERVADERCEPSPGSDGSLIGYQVRLDSARNEKTRLLFCTTGIL 714
Query: 64 LKVLVSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQML-----PSNPH 118
L+ L+ S L+ ITHII+DE+HER D +L +L+ ++ S+
Sbjct: 715 LRKLMGNRS-----------LTGITHIIVDEVHERSLLGDFILIVLKNLIEKQSSESSSK 763
Query: 119 LHLILMGASLDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVLSIVK 168
+ +ILM A++D FS YFG P++ G T+PV +Y+LEDV +K
Sbjct: 764 VKVILMSATVDSGS---FSSYFGHCPVVTAEGRTHPVTTYFLEDVYDQIK 810
>Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr5:31994096-31996650 | 20130731
Length = 808
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 85/156 (54%), Gaps = 14/156 (8%)
Query: 10 IVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLLKVLVS 69
I CTQPR ++A+SV+ R+S E G +GH VGY I E CT+E + ++
Sbjct: 258 IACTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFED----------CTSEKTIVKYMT 307
Query: 70 KGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILMGASLD 129
G LR + +L S + +++DE HER +D+L +++ + + P L L++ A+LD
Sbjct: 308 DG-MLLREFLTQPELDSYSVVMVDEAHERTLSTDILFGLVKDVARARPDLKLLISSATLD 366
Query: 130 XXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVLS 165
+FS YF PI +PG YPV +Y + +S
Sbjct: 367 ---AEKFSNYFDLAPIFKIPGRRYPVEIHYSKTAVS 399
>Medtr1g114490.1 | ATP-dependent RNA helicase DHX8 | HC |
chr1:51667204-51673502 | 20130731
Length = 1154
Score = 95.1 bits (235), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 21/170 (12%)
Query: 9 KIVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLLKVLV 68
KI CTQPR ++A+SV++R++ E G +G VGY I E G + I T +LL+ ++
Sbjct: 548 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 607
Query: 69 SKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILMGASL 128
+ LS + I++DE HER Y+D+L +L+Q++ P L LI+ A+L
Sbjct: 608 -----------VDESLSQYSVIMLDEAHERTIYTDVLFGLLKQLVKRRPELRLIVTSATL 656
Query: 129 DXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVLSIVKLGEDNHLDSN 178
D +FS YF I +PG T+PV Y K E ++LD++
Sbjct: 657 D---AEKFSGYFFNCNIFTIPGRTFPVEILY-------AKQPESDYLDAS 696
>Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 90/168 (53%), Gaps = 21/168 (12%)
Query: 10 IVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLLKVLVS 69
I CTQPR ++A+SV+ R++ E G +GH VGY I E CT++ + ++
Sbjct: 460 IACTQPRRVAAMSVAARVAHELGVKLGHEVGYSIRFED----------CTSDKTILKYMT 509
Query: 70 KGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILMGASLD 129
G LR + DL+S + +++DE HER +D+L A+++ + P L L++ A+LD
Sbjct: 510 DG-MLLREFLGEPDLASYSVVMVDEAHERTLSTDILFALVKDISRFRPDLKLLISSATLD 568
Query: 130 XXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVLSIVKLGEDNHLDS 177
+FS YF PI +PG YPV ++ K E ++LD+
Sbjct: 569 ---AEKFSDYFDSAPIFKIPGRRYPVEIHF-------TKAPEADYLDA 606
>Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 90/168 (53%), Gaps = 21/168 (12%)
Query: 10 IVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLLKVLVS 69
I CTQPR ++A+SV+ R++ E G +GH VGY I E CT++ + ++
Sbjct: 460 IACTQPRRVAAMSVAARVAHELGVKLGHEVGYSIRFED----------CTSDKTILKYMT 509
Query: 70 KGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILMGASLD 129
G LR + DL+S + +++DE HER +D+L A+++ + P L L++ A+LD
Sbjct: 510 DG-MLLREFLGEPDLASYSVVMVDEAHERTLSTDILFALVKDISRFRPDLKLLISSATLD 568
Query: 130 XXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVLSIVKLGEDNHLDS 177
+FS YF PI +PG YPV ++ K E ++LD+
Sbjct: 569 ---AEKFSDYFDSAPIFKIPGRRYPVEIHF-------TKAPEADYLDA 606
>Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 90/168 (53%), Gaps = 21/168 (12%)
Query: 10 IVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLLKVLVS 69
I CTQPR ++A+SV+ R++ E G +GH VGY I E CT++ + ++
Sbjct: 460 IACTQPRRVAAMSVAARVAHELGVKLGHEVGYSIRFED----------CTSDKTILKYMT 509
Query: 70 KGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILMGASLD 129
G LR + DL+S + +++DE HER +D+L A+++ + P L L++ A+LD
Sbjct: 510 DG-MLLREFLGEPDLASYSVVMVDEAHERTLSTDILFALVKDISRFRPDLKLLISSATLD 568
Query: 130 XXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVLSIVKLGEDNHLDS 177
+FS YF PI +PG YPV ++ K E ++LD+
Sbjct: 569 ---AEKFSDYFDSAPIFKIPGRRYPVEIHF-------TKAPEADYLDA 606
>Medtr2g098440.1 | Pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr2:42091662-42101447 | 20130731
Length = 1269
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 77/146 (52%), Gaps = 14/146 (9%)
Query: 10 IVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLLKVLVS 69
+ CTQPR ++A+SV++R+S E +G VGY I E G + I T VLL+ +
Sbjct: 619 VGCTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPNTVIKYMTDGVLLRETLK 678
Query: 70 KGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILMGASLD 129
DL I+MDE HER +D+L IL++++ LI+ A+L+
Sbjct: 679 DS-----------DLDKYRVIVMDEAHERSLSTDVLFGILKKVVAQRRDFKLIVTSATLN 727
Query: 130 XXXXXRFSRYFGEFPIIHVPGLTYPV 155
+FS +FG PI H+PG T+PV
Sbjct: 728 ---AQKFSHFFGSVPIFHIPGRTFPV 750
>Medtr1g023985.1 | ATP-dependent RNA helicase DHX8 | HC |
chr1:7751166-7755800 | 20130731
Length = 1223
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 21/170 (12%)
Query: 9 KIVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLLKVLV 68
KI CTQPR ++A+SV++R++ E G +G VGY I E G + I T +LL+ ++
Sbjct: 617 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 676
Query: 69 SKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILMGASL 128
++LS + I++DE HER ++D+L +L+Q++ P L LI+ A+L
Sbjct: 677 -----------VDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATL 725
Query: 129 DXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVLSIVKLGEDNHLDSN 178
D +FS YF I +PG T+PV Y K E ++LD++
Sbjct: 726 D---AEKFSGYFFNCNIFTIPGRTFPVEILY-------TKQPESDYLDAS 765
>Medtr1g023985.2 | ATP-dependent RNA helicase DHX8 | HC |
chr1:7751166-7755800 | 20130731
Length = 1223
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/170 (34%), Positives = 92/170 (54%), Gaps = 21/170 (12%)
Query: 9 KIVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLLKVLV 68
KI CTQPR ++A+SV++R++ E G +G VGY I E G + I T +LL+ ++
Sbjct: 617 KIGCTQPRRVAAMSVAKRVAEEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 676
Query: 69 SKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILMGASL 128
++LS + I++DE HER ++D+L +L+Q++ P L LI+ A+L
Sbjct: 677 -----------VDENLSQYSVIMLDEAHERTIHTDVLFGLLKQLVKRRPELRLIVTSATL 725
Query: 129 DXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVLSIVKLGEDNHLDSN 178
D +FS YF I +PG T+PV Y K E ++LD++
Sbjct: 726 D---AEKFSGYFFNCNIFTIPGRTFPVEILY-------TKQPESDYLDAS 765
>Medtr3g054400.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16 | HC | chr3:21592985-21589785 | 20130731
Length = 1066
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 53/145 (36%), Positives = 78/145 (53%), Gaps = 16/145 (11%)
Query: 12 CTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLLKVLVSKG 71
CTQPR ++A+SV++R+S E +G VGY I E G + I T VLL+
Sbjct: 418 CTQPRRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPNTIIKYMTDGVLLR------ 471
Query: 72 SCWLRTRSAKD-DLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILMGASLDX 130
+ KD DL I+MDE HER +D+L IL++++ LI+ A+L+
Sbjct: 472 ------ETLKDSDLDKYRVIVMDEAHERSLSTDVLFGILKKVVTQRRDFKLIVTSATLN- 524
Query: 131 XXXXRFSRYFGEFPIIHVPGLTYPV 155
+FS +FG PI H+PG T+P+
Sbjct: 525 --AQKFSHFFGNVPIFHIPGRTFPI 547
>Medtr1g086640.1 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr1:38781865-38776805 | 20130731
Length = 721
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 80/154 (51%), Gaps = 16/154 (10%)
Query: 10 IVCTQPRHISAISVSERISCERGESIGHNVGYKIPLE-CRGGRQSSIILCTTEVLLKVLV 68
I CTQPR ++A+SVS R++ E SIG VGY I E C R +LK L
Sbjct: 111 IACTQPRRVAAMSVSRRVAEEMDVSIGEEVGYSIRFEDCSSAR----------TVLKYLT 160
Query: 69 SKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILMGASL 128
LR L II+DE HER +D+L +L+++L + P L L++M A+L
Sbjct: 161 D--GMLLREAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSATL 218
Query: 129 DXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLED 162
+ +F YF P++ VPG +PV +Y ++
Sbjct: 219 E---AEKFQGYFFGAPLMKVPGRLHPVEIFYTQE 249
>Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 904
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 21/168 (12%)
Query: 10 IVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLLKVLVS 69
I CTQPR ++A+SV+ R+S E G +GH VGY I E CT++ + ++
Sbjct: 303 IACTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFED----------CTSKKTIVKYMT 352
Query: 70 KGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILMGASLD 129
G LR A+ +L S + +++DE HER +D+L +L+ + + P L L++ A+LD
Sbjct: 353 DG-MLLREFLAQPELDSYSVVMVDEAHERTLSTDILFGLLKDVARARPDLKLLISSATLD 411
Query: 130 XXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVLSIVKLGEDNHLDS 177
+F +F +PG YPV ++ E E N+ D+
Sbjct: 412 ---AEKFINFFDHAQKFEIPGRPYPVEIHFTEK-------AEANYFDA 449
>Medtr8g080240.3 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34490000-34479591 | 20130731
Length = 589
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 85/153 (55%), Gaps = 15/153 (9%)
Query: 8 CKIVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLLKVL 67
KI TQPR ++A+SVS R++ E G +G VGY I E R R + I T VL
Sbjct: 47 SKIAVTQPRRVAAVSVSRRVAQELGVQLGEEVGYAIRFEDRTSRNTRIKYLTDGVL---- 102
Query: 68 VSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLP-SNPHLHLILMGA 126
LR A +L+ + II+DE HER +D+L+ ++++++ + +L +++ A
Sbjct: 103 -------LRESLADPELNDYSVIILDEAHERSLNTDILMGLMKRLVKIRSSNLKVLITSA 155
Query: 127 SLDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYY 159
+LD + S++F + P++++PG YPV Y
Sbjct: 156 TLD---GDKVSKFFRDCPVLNIPGKLYPVEVLY 185
>Medtr8g080240.1 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34490015-34479594 | 20130731
Length = 697
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 85/153 (55%), Gaps = 15/153 (9%)
Query: 8 CKIVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLLKVL 67
KI TQPR ++A+SVS R++ E G +G VGY I E R R + I T VL
Sbjct: 47 SKIAVTQPRRVAAVSVSRRVAQELGVQLGEEVGYAIRFEDRTSRNTRIKYLTDGVL---- 102
Query: 68 VSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLP-SNPHLHLILMGA 126
LR A +L+ + II+DE HER +D+L+ ++++++ + +L +++ A
Sbjct: 103 -------LRESLADPELNDYSVIILDEAHERSLNTDILMGLMKRLVKIRSSNLKVLITSA 155
Query: 127 SLDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYY 159
+LD + S++F + P++++PG YPV Y
Sbjct: 156 TLD---GDKVSKFFRDCPVLNIPGKLYPVEVLY 185
>Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 768
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 21/168 (12%)
Query: 10 IVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLLKVLVS 69
I CTQPR ++A+SV+ R+S E G +GH VGY I E CT++ + ++
Sbjct: 303 IACTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFED----------CTSKKTIVKYMT 352
Query: 70 KGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILMGASLD 129
G LR A+ +L S + +++DE HER +D+L +L+ + + P L L++ A+LD
Sbjct: 353 DG-MLLREFLAQPELDSYSVVMVDEAHERTLSTDILFGLLKDVARARPDLKLLISSATLD 411
Query: 130 XXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVLSIVKLGEDNHLDS 177
+F +F +PG YPV ++ E E N+ D+
Sbjct: 412 ---AEKFINFFDHAQKFEIPGRPYPVEIHFTEK-------AEANYFDA 449
>Medtr8g080240.2 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34489993-34479594 | 20130731
Length = 647
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 85/153 (55%), Gaps = 15/153 (9%)
Query: 8 CKIVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLLKVL 67
KI TQPR ++A+SVS R++ E G +G VGY I E R R + I T VL
Sbjct: 47 SKIAVTQPRRVAAVSVSRRVAQELGVQLGEEVGYAIRFEDRTSRNTRIKYLTDGVL---- 102
Query: 68 VSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLP-SNPHLHLILMGA 126
LR A +L+ + II+DE HER +D+L+ ++++++ + +L +++ A
Sbjct: 103 -------LRESLADPELNDYSVIILDEAHERSLNTDILMGLMKRLVKIRSSNLKVLITSA 155
Query: 127 SLDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYY 159
+LD + S++F + P++++PG YPV Y
Sbjct: 156 TLD---GDKVSKFFRDCPVLNIPGKLYPVEVLY 185
>Medtr6g061840.3 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 587
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 86/168 (51%), Gaps = 21/168 (12%)
Query: 10 IVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLLKVLVS 69
I CTQPR ++A+SV+ R+S E G +GH VGY I E CT++ + ++
Sbjct: 303 IACTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFED----------CTSKKTIVKYMT 352
Query: 70 KGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILMGASLD 129
G LR A+ +L S + +++DE HER +D+L +L+ + + P L L++ A+LD
Sbjct: 353 DG-MLLREFLAQPELDSYSVVMVDEAHERTLSTDILFGLLKDVARARPDLKLLISSATLD 411
Query: 130 XXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVLSIVKLGEDNHLDS 177
+F +F +PG YPV ++ E E N+ D+
Sbjct: 412 ---AEKFINFFDHAQKFEIPGRPYPVEIHFTEK-------AEANYFDA 449
>Medtr3g052610.1 | Pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:20814127-20817509 | 20130731
Length = 715
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/155 (34%), Positives = 82/155 (52%), Gaps = 18/155 (11%)
Query: 10 IVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLLKVLVS 69
I CTQPR ++A+SVS R++ E SIG VGY I E ++ + T +LL
Sbjct: 134 IACTQPRRVAAMSVSRRVAEEMDVSIGEEVGYSIRFEDCSSAKTVLKFLTDGMLL----- 188
Query: 70 KGSCWLRTRSAKDD--LSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILMGAS 127
R A D L II+DE HER +D+L +L+++L + P L L++M A+
Sbjct: 189 --------REAMTDPLLERYKVIILDEAHERTLATDVLFGLLKEVLKNRPDLKLVVMSAT 240
Query: 128 LDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLED 162
L+ +F YF P++ V G +PV+ +Y ++
Sbjct: 241 LE---AEKFKSYFLGAPLMKVRGRLHPVKIFYTKE 272
>Medtr4g485610.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr4:33389635-33387508 | 20130731
Length = 683
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 76/151 (50%), Gaps = 16/151 (10%)
Query: 10 IVCTQPRHISAISVSERISCERGESIGHNVGYKIPLE-CRGGRQSSIILCTTEVLLKVLV 68
+ CTQPR ++A+SVS R++ E SIG VGY I E C R +LK L
Sbjct: 73 VACTQPRRVAALSVSRRVAEEMDVSIGEEVGYSIRFEDCSSSR----------TVLKYLT 122
Query: 69 SKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILMGASL 128
LR L II+DE HER +DLL +L+++L + L L++M A+L
Sbjct: 123 D--GMLLREAMTDPLLERYKVIILDEAHERTLATDLLFGLLKEILRNRTDLKLVVMSATL 180
Query: 129 DXXXXXRFSRYFGEFPIIHVPGLTYPVRSYY 159
+ +F YF P++ VPG +PV Y
Sbjct: 181 E---AEKFKSYFFGAPLMKVPGRLHPVEIRY 208
>Medtr1g088590.1 | zinc finger CCCH domain protein | HC |
chr1:39615599-39607040 | 20130731
Length = 1022
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 13/131 (9%)
Query: 10 IVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLLKVLVS 69
I+CT PR + +SV++ ++ R +G VGY I S I+ T VLL +
Sbjct: 75 ILCTLPRRFAVVSVAKMVAKARNCQLGEEVGYHIGHSRHFSASSEIVFKTAGVLLDEMQE 134
Query: 70 KGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILMGASLD 129
KG L+ + II+DE+HER SDL+L ++Q L N L ++LM A+ D
Sbjct: 135 KGLTALKYKV----------IILDEVHERSVESDLVLVCVKQFLLKNNDLRVVLMSATAD 184
Query: 130 XXXXXRFSRYF 140
R+ YF
Sbjct: 185 ---ISRYRDYF 192
>Medtr8g041990.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr8:15840782-15843798 | 20130731
Length = 650
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 74/168 (44%), Gaps = 53/168 (31%)
Query: 10 IVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLLKVLVS 69
+ CTQPR ++A+SV+ R+S E G +GH
Sbjct: 155 LACTQPRRVAAMSVAARVSEEMGVKLGH-------------------------------- 182
Query: 70 KGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILMGASLD 129
+ +L S + I++DE HER +D+L +++ + + P L L++ A+LD
Sbjct: 183 -----------EPELDSYSVIMVDEAHERTLSTDILFGLVKDVARTRPDLKLLISSATLD 231
Query: 130 XXXXXRFSRYFGEFPIIHVPGLTYPVRSYYLEDVLSIVKLGEDNHLDS 177
+FS YF PI +PG YPV ++ K E ++LD+
Sbjct: 232 ---AKKFSNYFDLAPIFKIPGRRYPVEIHF-------TKAPEADYLDA 269
>Medtr2g015320.1 | ATP-dependent RNA helicase DHX35 | HC |
chr2:4513881-4525364 | 20130731
Length = 701
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 2 WCKGEVCKIVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTE 61
W G I CTQPR ++ +VS R++ E G +G VGY I E + +++ T+
Sbjct: 95 WASGGRL-IACTQPRRLAVQAVSSRVAQEMGVKLGDQVGYTIRFEDVTNQDETVLKFVTD 153
Query: 62 VLLKVLVSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHL 121
+L LR L+ + +++DE HER +D+LL +L+++ P L L
Sbjct: 154 GVL----------LREMMNDPLLTKYSVVMVDEAHERSISTDILLGLLKKIQKRRPELRL 203
Query: 122 ILMGASLDXXXXXRFSR 138
I+ A+++ F R
Sbjct: 204 IIASATIEAKSMADFFR 220
>Medtr7g095080.1 | ATP-dependent RNA helicase DHX35 | HC |
chr7:38011601-38003021 | 20130731
Length = 725
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 85/200 (42%), Gaps = 64/200 (32%)
Query: 5 GEVCKIVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLL 64
G+V I TQPR ++AI+V++R++ E G +G VGY + + + I T +LL
Sbjct: 94 GKVVGI--TQPRRVAAITVAKRVAEECGYELGQKVGYSVRFDDSTSNSTRIKYMTDGLLL 151
Query: 65 KVLVSKGSCWLRTRSAKDD--LSSITHIIMDEIHERDRYSDLLLAILRQML--------- 113
R A D LS + II+DE HER ++D+L+ +L+++
Sbjct: 152 -------------REALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKKVQHARSNSIKD 198
Query: 114 ----------------------------------PSNPHLHLILMGASLDXXXXXRFSRY 139
S+P L LI+M ASLD FS Y
Sbjct: 199 GRNLDNGNKNTNGFMLLDKDNGQNGSFLRKGHREKSSP-LKLIIMSASLDART---FSEY 254
Query: 140 FGEFPIIHVPGLTYPVRSYY 159
FG +H+ G +PV +Y
Sbjct: 255 FGGAKAVHIQGRQFPVDIFY 274
>Medtr0267s0070.1 | NB-ARC domain disease resistance protein, putative
| LC | scaffold0267:17737-24509 | 20130731
Length = 1982
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 25/157 (15%)
Query: 10 IVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTT------EVL 63
IVCTQPR I+A S++ER+ E G G + S I C + +
Sbjct: 967 IVCTQPRRIAAKSLAERVREESG----------------GCYEDSSIKCYSSFSSWNKFD 1010
Query: 64 LKVLVSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLIL 123
+++ C L+ + +LS I+ II+DE HER +DLLLA+++ +L + LI+
Sbjct: 1011 SRIIFMTDHCLLQHYMSDKNLSGISCIIVDEAHERSINTDLLLALIKNLLSKRVEMRLII 1070
Query: 124 MGASLDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYL 160
M A+ D + S YF I VPG +PV Y+
Sbjct: 1071 MSATAD---AKQLSDYFYGCGIFRVPGRNFPVEVRYV 1104
>Medtr3g014030.1 | helicase, IBR and zinc finger protein | HC |
chr3:3875260-3882505 | 20130731
Length = 1731
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 76/157 (48%), Gaps = 25/157 (15%)
Query: 10 IVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTT------EVL 63
IVCTQPR I+A S++ER+ E G G + S I C + +
Sbjct: 314 IVCTQPRRIAAKSLAERVREESG----------------GCYEDSSIKCYSSFSSWNKFD 357
Query: 64 LKVLVSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLIL 123
+++ C L+ + + + I+ II+DE HER +DLLLA+++ +L + LI+
Sbjct: 358 SRIIFMTDHCLLQHYMSDKNFTGISCIIVDEAHERSINTDLLLALIKNLLSKRVEMRLII 417
Query: 124 MGASLDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYL 160
M A+ D + S YF I VPG +PV Y+
Sbjct: 418 MSATAD---AKQLSDYFYGCGIFRVPGRNFPVEVRYV 451
>Medtr4g023590.1 | ATP-dependent RNA helicase DHX37-like protein,
putative | HC | chr4:7996592-7989993 | 20130731
Length = 1331
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 76/173 (43%), Gaps = 34/173 (19%)
Query: 10 IVCTQPRHISAISVSERISCERGESIGHNVGYKIPLECRGGRQSSIILCTTEVLLKVLVS 69
I TQPR ++ ++ ++R++ E G +G VG+++ + + G SI T +LL+ +
Sbjct: 326 IGVTQPRRVAVLATAKRVAYELGVRLGKEVGFQVRYDKKIGENCSIKFMTDGILLREV-- 383
Query: 70 KGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPH----------- 118
+ LR S +I+DE HER +D+L+ +L +++ +
Sbjct: 384 QNDILLRRYSV---------LILDEAHERSLNTDILIGMLSRVIRTRQKIYDEQQKMVLS 434
Query: 119 ------------LHLILMGASLDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYY 159
L L+LM A+L + P+I VP +PV Y+
Sbjct: 435 GESISPDKMVFPLKLVLMSATLRVQDFTSGRLFHTPPPVIEVPTRQFPVTMYF 487
>Medtr3g086770.1 | helicase, IBR and zinc finger protein | HC |
chr3:39323283-39316838 | 20130731
Length = 1718
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/153 (33%), Positives = 74/153 (48%), Gaps = 16/153 (10%)
Query: 10 IVCTQPRHISAISVSERISCERGESIGHNV--GYKIPLECRGGRQSSIILCTTEVLLKVL 67
IVCTQPR I+A S++ER+ E N Y C+ S I T LL+
Sbjct: 314 IVCTQPRKIAAKSLAERVQEESKGCYEENSIQCYSTFSSCQKFDDSRIAFMTDHCLLQQY 373
Query: 68 VSKGSCWLRTRSAKDDLSSITHIIMDEIHERDRYSDLLLAILRQMLPSNPHLHLILMGAS 127
+S +LS ++ II+DE HER +DLLLA+++ +L + LI+M A+
Sbjct: 374 MSD-----------RNLSGVSCIIVDEAHERSLNTDLLLALIKNLLCKRVEMRLIIMSAT 422
Query: 128 LDXXXXXRFSRYFGEFPIIHVPGLTYPVRSYYL 160
D + S YF I HV G +PV Y+
Sbjct: 423 AD---AKQLSDYFYGCGIFHVLGRNFPVEVRYV 452