Miyakogusa Predicted Gene

Lj0g3v0278039.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0278039.1 Non Characterized Hit- tr|I1M2W2|I1M2W2_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,73.83,0,DUF92,Protein
of unknown function DUF92, TMEM19; seg,NULL; FAMILY NOT NAMED,Protein
of unknown funct,CUFF.18474.1
         (322 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g073380.1 | integral membrane family protein | HC | chr2:3...   417   e-117
Medtr7g055620.1 | raffinose synthase or seed inhibition protein ...   125   5e-29

>Medtr2g073380.1 | integral membrane family protein | HC |
           chr2:31111100-31102287 | 20130731
          Length = 323

 Score =  417 bits (1072), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 228/327 (69%), Positives = 261/327 (79%), Gaps = 9/327 (2%)

Query: 1   MAYSSRVLHATAFSSS-HFLFQH---QPRXXXXXXXXXXXXXXXXXXXRRNM-QASRAAA 55
           MAYS+  L+   F  S   LFQH   +P                      NM Q+SR   
Sbjct: 1   MAYST--LYTFTFPPSLPLLFQHHKHKPYSLSPKLTFTPTTLNPNILRNNNMMQSSRV-- 56

Query: 56  SSFQDAVGGAMALLQATPATWQSSVLSNLFIFLVGSPLLVTGLSLSGIAAAFLLGTLTWR 115
           SS QD VGGAMA++Q++PATWQSS+ SNL IF++GSP+LVTGLS  GI AAFLLGTLTWR
Sbjct: 57  SSVQDVVGGAMAIVQSSPATWQSSLFSNLLIFVLGSPILVTGLSFEGIVAAFLLGTLTWR 116

Query: 116 AFGPSGFFLVATYFVIGTAVTKVKMAQKMAQGIAEKRKGRRGPGSVIGSSAAGCVFAFLS 175
           AFG  GF LVATYF+IGTA TKVKMAQKM QG+AEKRKGRRGPGSVIGSSAAGCV AFL+
Sbjct: 117 AFGGDGFLLVATYFIIGTAATKVKMAQKMEQGVAEKRKGRRGPGSVIGSSAAGCVCAFLT 176

Query: 176 IYGVGGEAYFRLWRLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTTFKVVPRGTEGAVSV 235
           I+GVGG A+ +LWRLGFVASFCTKLSDTVSSEIGKAYGKTTYLVT+FKVVPRGTEGAVSV
Sbjct: 177 IFGVGGAAFSQLWRLGFVASFCTKLSDTVSSEIGKAYGKTTYLVTSFKVVPRGTEGAVSV 236

Query: 236 EGTLSGVLASIVLASVSCLIGQVGLHEAIICVLASQIANHGESIISAALQEKERFQWLNN 295
           EGTL+G+LAS+ LA VS L+GQ+G HE IIC+LA+Q AN GESII A+ QE+E F+WLNN
Sbjct: 237 EGTLAGILASVALAFVSFLLGQIGSHEVIICILAAQFANLGESIIGASFQEREGFRWLNN 296

Query: 296 DAVNIINVSMGSITAVLLQQALRSLHP 322
           D VNIIN+SMGSI AVL+QQAL++LHP
Sbjct: 297 DIVNIINISMGSIIAVLMQQALQNLHP 323


>Medtr7g055620.1 | raffinose synthase or seed inhibition protein
           Sip1 | HC | chr7:19052899-19057983 | 20130731
          Length = 379

 Score =  125 bits (314), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 64/88 (72%), Positives = 72/88 (81%), Gaps = 9/88 (10%)

Query: 129 FVIGTAVTKVKMAQKMAQGIAEKRKGRRGPGSVIGSSAAGCVFAFLSIYGVGGEAYFRLW 188
            ++GTA TK         G+AEKRKGRRG GSVIGSSAAGCV AFL+I+GVGG A+ +LW
Sbjct: 73  LILGTAATK---------GVAEKRKGRRGLGSVIGSSAAGCVCAFLTIFGVGGAAFSQLW 123

Query: 189 RLGFVASFCTKLSDTVSSEIGKAYGKTT 216
           RLGFVASFCT+LSDTVSSEIGKAY KTT
Sbjct: 124 RLGFVASFCTRLSDTVSSEIGKAYEKTT 151