Miyakogusa Predicted Gene

Lj0g3v0277989.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0277989.1 tr|G7KY07|G7KY07_MEDTR Ubiquinone biosynthesis
monooxygenase COQ6 OS=Medicago truncatula GN=MTR_7g05,71.79,0.0000004,
,CUFF.18468.1
         (39 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g051967.1 | hypothetical protein | HC | chr7:18249512-1824...    56   6e-09
Medtr2g060550.3 | ubiquinone biosynthesis monooxygenase COQ6-lik...    55   2e-08
Medtr2g060550.2 | ubiquinone biosynthesis monooxygenase COQ6-lik...    55   2e-08
Medtr2g060550.1 | ubiquinone biosynthesis monooxygenase COQ6-lik...    55   2e-08

>Medtr7g051967.1 | hypothetical protein | HC |
          chr7:18249512-18247966 | 20130731
          Length = 169

 Score = 56.2 bits (134), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 27/39 (69%), Positives = 32/39 (82%)

Query: 1  MNSVLKKSVSNIYALKIPRKSFCSKVVKVAGSTTGEPSN 39
          MN V+KK+VSN++ALKIPRK FCS+VVKV  ST   PSN
Sbjct: 1  MNRVIKKTVSNVFALKIPRKCFCSQVVKVDASTNILPSN 39


>Medtr2g060550.3 | ubiquinone biosynthesis monooxygenase COQ6-like
          protein | HC | chr2:25696497-25686530 | 20130731
          Length = 509

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/39 (66%), Positives = 31/39 (79%)

Query: 1  MNSVLKKSVSNIYALKIPRKSFCSKVVKVAGSTTGEPSN 39
          MN V+KK+VSN++ALKIPRK FCS+ VKV  ST   PSN
Sbjct: 1  MNRVIKKTVSNVFALKIPRKCFCSQAVKVDASTNLLPSN 39


>Medtr2g060550.2 | ubiquinone biosynthesis monooxygenase COQ6-like
          protein | HC | chr2:25696497-25686530 | 20130731
          Length = 509

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/39 (66%), Positives = 31/39 (79%)

Query: 1  MNSVLKKSVSNIYALKIPRKSFCSKVVKVAGSTTGEPSN 39
          MN V+KK+VSN++ALKIPRK FCS+ VKV  ST   PSN
Sbjct: 1  MNRVIKKTVSNVFALKIPRKCFCSQAVKVDASTNLLPSN 39


>Medtr2g060550.1 | ubiquinone biosynthesis monooxygenase COQ6-like
          protein | HC | chr2:25696497-25686530 | 20130731
          Length = 509

 Score = 54.7 bits (130), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/39 (66%), Positives = 31/39 (79%)

Query: 1  MNSVLKKSVSNIYALKIPRKSFCSKVVKVAGSTTGEPSN 39
          MN V+KK+VSN++ALKIPRK FCS+ VKV  ST   PSN
Sbjct: 1  MNRVIKKTVSNVFALKIPRKCFCSQAVKVDASTNLLPSN 39