Miyakogusa Predicted Gene

Lj0g3v0277319.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0277319.1 Non Characterized Hit- tr|Q3M7M3|Q3M7M3_ANAVT
Putative uncharacterized protein OS=Anabaena
variabili,35.51,9e-19,seg,NULL; DUF4281,Protein of unknown function
DUF4281,CUFF.18408.1
         (233 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g025680.1 | neoxanthin synthase | HC | chr6:8784317-878095...   317   5e-87
Medtr6g018550.1 | neoxanthin synthase | HC | chr6:7110173-711341...   312   2e-85
Medtr7g007280.1 | neoxanthin synthase | HC | chr7:1411817-141508...   294   5e-80

>Medtr6g025680.1 | neoxanthin synthase | HC | chr6:8784317-8780952 |
           20130731
          Length = 240

 Score =  317 bits (813), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 165/225 (73%), Positives = 185/225 (82%), Gaps = 9/225 (4%)

Query: 15  KIDHLGQTITPCGKGQTFPFPIINNGYQSIVRNR-----RINLKGDWSFIGGSRMVVNQQ 69
           KIDHLG T     K Q + FPI  NG +  + N+     RI L  DWSFIGGSR+VV Q+
Sbjct: 11  KIDHLGMTTNL--KEQKYSFPIRINGAKLELCNKLIVKSRIKLIRDWSFIGGSRIVVKQK 68

Query: 70  VVRLVPY-RKASRVYASWLSGGPELASSVFTLATTAVLPFYTLMIVAPNSELTKKSMVSG 128
           V+RLV   +KAS V AS LSG  +LASS FT+ T AVLPFYTLM++APNSELTKKSM S 
Sbjct: 69  VMRLVASPKKASPVNASLLSGS-QLASSAFTIGTAAVLPFYTLMVLAPNSELTKKSMQSN 127

Query: 129 VPYVVLGILYAYLLYLSWTPETVELIFASKYLLPELTSIGKMFSSEMTLASAWVHLLAID 188
           VPYV+LGILYAYLLYLSWTPETVEL+FASKYLLPELTSIGKMFSSEMTLASAW+HLL ID
Sbjct: 128 VPYVILGILYAYLLYLSWTPETVELLFASKYLLPELTSIGKMFSSEMTLASAWIHLLVID 187

Query: 189 LFAARQVFLDGLENQIETRHSVSLCLFFCPVGILTHVITKAITET 233
           LFAARQVF DG ENQIETRHSVSLCLFFCP+GIL+HV+TKA+T+T
Sbjct: 188 LFAARQVFQDGQENQIETRHSVSLCLFFCPIGILSHVVTKAMTKT 232


>Medtr6g018550.1 | neoxanthin synthase | HC | chr6:7110173-7113413 |
           20130731
          Length = 236

 Score =  312 bits (799), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 161/225 (71%), Positives = 184/225 (81%), Gaps = 13/225 (5%)

Query: 15  KIDHLGQTITPCGKGQTFPFPIINNGYQ-----SIVRNRRINLKGDWSFIGGSRMVVNQQ 69
           KID+LG+T      GQ +  PI +N  +      ++   RINL  DWSFIGGSR+VV Q+
Sbjct: 11  KIDNLGKT------GQKYYLPIRSNDAKFELCKKLIVKSRINLIRDWSFIGGSRIVVKQK 64

Query: 70  VVRLVPY-RKASRVYASWLSGGPELASSVFTLATTAVLPFYTLMIVAPNSELTKKSMVSG 128
           ++RLV   +KAS V AS LSG  +LASS FT+ T AVLPFYTLM +APNSELTKKSM S 
Sbjct: 65  IMRLVASPKKASPVNASLLSGS-QLASSAFTIGTAAVLPFYTLMALAPNSELTKKSMQSN 123

Query: 129 VPYVVLGILYAYLLYLSWTPETVELIFASKYLLPELTSIGKMFSSEMTLASAWVHLLAID 188
           VPYV+LGILYAYLLYLSWTPETVEL+FASKYLLPELTSIGKMFSSEMTLASAW+HLL ID
Sbjct: 124 VPYVILGILYAYLLYLSWTPETVELLFASKYLLPELTSIGKMFSSEMTLASAWIHLLVID 183

Query: 189 LFAARQVFLDGLENQIETRHSVSLCLFFCPVGILTHVITKAITET 233
           LFAARQVF DG ENQIETRHSVSLCLFFCP+GIL+HV+TKA+T+T
Sbjct: 184 LFAARQVFQDGQENQIETRHSVSLCLFFCPIGILSHVVTKAMTKT 228


>Medtr7g007280.1 | neoxanthin synthase | HC | chr7:1411817-1415080 |
           20130731
          Length = 239

 Score =  294 bits (752), Expect = 5e-80,   Method: Compositional matrix adjust.
 Identities = 141/202 (69%), Positives = 166/202 (82%), Gaps = 1/202 (0%)

Query: 32  FPFPIINNGYQSIVRNRRINLKGDWSFIGGSRMVVNQQVVRLVPYRKASRVYASWLSGGP 91
           FPF I +NG    +   R +L GDWSFIGGSR+ V  +  R V + K S+++ASW  G  
Sbjct: 31  FPFSITSNGVTEHISRSRFSLSGDWSFIGGSRIAVKPKATRSVRHPKRSQIHASWFMGS- 89

Query: 92  ELASSVFTLATTAVLPFYTLMIVAPNSELTKKSMVSGVPYVVLGILYAYLLYLSWTPETV 151
           +LAS+VFT  T AVLPFYTLM++AP SELT+KSM S +PYVVLG+LYAYLL LSWTPETV
Sbjct: 90  QLASTVFTWGTVAVLPFYTLMVLAPKSELTRKSMESSLPYVVLGVLYAYLLCLSWTPETV 149

Query: 152 ELIFASKYLLPELTSIGKMFSSEMTLASAWVHLLAIDLFAARQVFLDGLENQIETRHSVS 211
            LIFASKYLLPEL+SIGKMFSSE+TLASAW+HLL +DLFAAR +F DGL+NQIETRHSVS
Sbjct: 150 RLIFASKYLLPELSSIGKMFSSELTLASAWIHLLVVDLFAARHIFRDGLKNQIETRHSVS 209

Query: 212 LCLFFCPVGILTHVITKAITET 233
            CLFFCP+GILTHVITKA+T+T
Sbjct: 210 FCLFFCPIGILTHVITKAMTKT 231