Miyakogusa Predicted Gene

Lj0g3v0277309.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0277309.1 Non Characterized Hit- tr|D8S279|D8S279_SELML
Putative uncharacterized protein SmMTP12 (Fragment)
OS,26.53,0.00000000000004,Multidrug resistance efflux transporter
EmrE,NULL; EamA,Drug/metabolite transporter,CUFF.18405.1
         (358 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g018620.1 | nodulin MtN21/EamA-like transporter family pro...   642   0.0  
Medtr6g463330.1 | cation diffusion facilitator family transporte...    65   1e-10

>Medtr6g018620.1 | nodulin MtN21/EamA-like transporter family
           protein | HC | chr6:7151891-7146315 | 20130731
          Length = 357

 Score =  642 bits (1656), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 309/358 (86%), Positives = 329/358 (91%), Gaps = 1/358 (0%)

Query: 1   MMSPNHLSEDRGGPSHHHFRHTPFQIIHTAANFMRIWSIYSMYRYLYQTGASVVLFLFAC 60
           MMSPNHLS+DRG P HH FRHTP QIIH AANF+RIWSIYSM+RYL QTGASVVLFLFAC
Sbjct: 1   MMSPNHLSDDRGSPPHH-FRHTPLQIIHVAANFLRIWSIYSMFRYLSQTGASVVLFLFAC 59

Query: 61  LAPTAIIFLVLQKPWKGRPLSNTQIVPSIINGFITALYLVLWGKGLKSCGPVRALLAEYS 120
           LAP AI+FL+LQKPWKGRPLSNTQ+VPSIINGFITALYLVLWGKGLKSCGPVRA+L EYS
Sbjct: 60  LAPAAILFLILQKPWKGRPLSNTQVVPSIINGFITALYLVLWGKGLKSCGPVRAILGEYS 119

Query: 121 GAVLGVLSAVLYGRRSHLLKKIGGLIAMLASLYLLSEGWAMATYSPFSWEDRDDSEVQTE 180
           GAVLGVLS VLYGRRS+L KKIGGLIAM AS YLLSEGWA ATY PF    +D++E QTE
Sbjct: 120 GAVLGVLSGVLYGRRSNLWKKIGGLIAMCASFYLLSEGWATATYFPFYILTQDETEAQTE 179

Query: 181 QILGLKQMFVPIFAGILSALRRVIARRVSIKNQLKKRLHALTIASATCFMFPIAMWDIII 240
            +LGLKQM +PI AGILSALRRVIARRVSIKNQLK+RLHALTIASATCFMFPIAMWD+II
Sbjct: 180 HVLGLKQMLIPIIAGILSALRRVIARRVSIKNQLKRRLHALTIASATCFMFPIAMWDVII 239

Query: 241 GSPSDSNGKLPFSAWAFFSTILFGNILIFYVDSIAEERLHMVFSSPRHLMVASACIIIME 300
           GSPS+SNGKLPFSAWAF STILFGNI+IFY DSIAEERLHMVFSSPRHLM ASACII+ME
Sbjct: 240 GSPSESNGKLPFSAWAFSSTILFGNIVIFYADSIAEERLHMVFSSPRHLMAASACIIVME 299

Query: 301 IVYKMDFSLTGFVICCLILGFGIYQATSLERNRKDSTRNSDLSNGEFDDQIQMSSLPT 358
           IVYKMDFSL GFVIC LILG GIYQAT+LERNRKDS RNSDLSNGEFD+QIQMSSLPT
Sbjct: 300 IVYKMDFSLAGFVICSLILGLGIYQATALERNRKDSVRNSDLSNGEFDNQIQMSSLPT 357


>Medtr6g463330.1 | cation diffusion facilitator family transporter |
           HC | chr6:21913825-21916862 | 20130731
          Length = 905

 Score = 65.1 bits (157), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/258 (22%), Positives = 109/258 (42%), Gaps = 14/258 (5%)

Query: 80  LSNTQIVPSIINGFITALYLVLWGKGLKSCGPVRALLAEYSGAVLGVLSAVLYGRRSHL- 138
           ++N+Q    I    + AL  +L    L+ CG    ++AE+ G V          RR+   
Sbjct: 147 ITNSQQRILICKSILLALVFLLRFSALRYCGTASMIIAEFMGTVAA--RRFQRNRRNSFG 204

Query: 139 LKKIGGLIAMLASLYLLSEGWAMATYSPFSWEDRDDSEVQTEQILGLKQMFVPIFAGILS 198
             +I G +++   L++LS GW      PF     D       + + + Q+ +P  AG L+
Sbjct: 205 WVEIRGFLSLFLGLFMLSFGWDRIECFPFGGNGVD-------KCVKVWQLLLPFLAGFLA 257

Query: 199 ALRRVIA--RRVSIKNQLKKRLHALTIASATCFMFPIAMWDIIIGSPSDSNGKLPFSAWA 256
              + ++     S K   +KR+  +T+   T  +F  A+    +    + +       W 
Sbjct: 258 CYEQCVSVDDYGSFKQLDRKRVRLITLFFTTIVLFVPAVISFFVYESGEDSVAFGNLVWP 317

Query: 257 FFSTILFGNILI--FYVDSIAEERLHMVFSSPRHLMVASACIIIMEIVYKMDFSLTGFVI 314
             +T++FG +L   ++      + L     S R  +V   C +I+E+ Y  + SL G +I
Sbjct: 318 LANTVVFGVLLSENYFSSGGGGDDLLSFKDSKREFLVMFMCTLILELFYYPNISLWGLLI 377

Query: 315 CCLILGFGIYQATSLERN 332
           C L+L   +      + N
Sbjct: 378 CGLLLYVAVRDLDPFDSN 395