Miyakogusa Predicted Gene

Lj0g3v0277019.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0277019.1 Non Characterized Hit- tr|F6GUG8|F6GUG8_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,52,0.000000000000003,Tub_2,LURP1-like domain; Tubby C-terminal
domain-like,Tubby C-terminal-like domain,gene.g21552.t1.1
         (164 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g074550.1 | tubby C 2 protein | HC | chr5:31690066-3168745...   193   7e-50
Medtr5g074560.1 | tubby C 2 protein | HC | chr5:31696200-3169375...   175   2e-44
Medtr7g072120.1 | LURP-one-like protein | HC | chr7:26795170-267...    71   4e-13
Medtr7g072270.2 | LURP-one-like protein | HC | chr7:26835816-268...    68   4e-12
Medtr7g072270.1 | LURP-one-like protein | HC | chr7:26835816-268...    67   1e-11
Medtr7g072170.1 | LURP-one-like protein | HC | chr7:26805158-268...    66   2e-11
Medtr7g072140.1 | LURP-one-like protein | HC | chr7:26800151-268...    65   3e-11
Medtr7g072250.1 | tubby C 2 protein | HC | chr7:26824094-2683147...    58   4e-09
Medtr4g029430.1 | tubby C 2 protein | HC | chr4:10170282-1017167...    57   6e-09
Medtr7g071710.1 | LURP-one-like protein | HC | chr7:26583217-265...    49   2e-06
Medtr1g014180.1 | tubby C 2 protein | LC | chr1:3083692-3082720 ...    48   5e-06
Medtr1g014150.1 | tubby C 2 protein | LC | chr1:3099896-3098026 ...    47   8e-06

>Medtr5g074550.1 | tubby C 2 protein | HC | chr5:31690066-31687451 |
           20130731
          Length = 196

 Score =  193 bits (490), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 96/153 (62%), Positives = 120/153 (78%), Gaps = 7/153 (4%)

Query: 16  LETSESSYPGSGSLHIPIDLFGSKKHAGAPRGVLAFADALGNILFTVNRHPPNRNYKK-- 73
           +ETS+  Y G+   HIPIDLFGSKKHAG PRG+LAF DA GNI+F V+R PP+ N     
Sbjct: 1   METSDLEYTGTEDQHIPIDLFGSKKHAGVPRGILAFTDASGNIVFKVHRQPPDPNSSSSL 60

Query: 74  ---KLLLDASGNIIFSIYRHE-GSWKCYKGNGDGDKDLVFRVERTLKTLTRVELEVFFDG 129
              KLLLD++ N +FSI+RH  G WKCYKG+GD +K+LV +V+RT+KT+T+VELEVFF G
Sbjct: 61  KDTKLLLDSNDNPLFSIHRHHNGIWKCYKGSGDENKELVLQVKRTVKTITKVELEVFFAG 120

Query: 130 ER-PNNEGCDLKLRGSPFQRSCSIYKDTDLVAQ 161
           ER  +N+ CDLK+ GSPF+RSCS+YKD DLVAQ
Sbjct: 121 ERLKDNDTCDLKVIGSPFKRSCSVYKDGDLVAQ 153


>Medtr5g074560.1 | tubby C 2 protein | HC | chr5:31696200-31693753 |
           20130731
          Length = 189

 Score =  175 bits (443), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 91/150 (60%), Positives = 111/150 (74%), Gaps = 6/150 (4%)

Query: 14  MELETSES-SYPGSGSLHIPIDLFGSKKHAGAPRGVLAFADALGNILFTVNRHPPNRNYK 72
           ME+ETSE   Y G+   HIPIDLF SK+ A  PRG L F +A GN++F V   PPN    
Sbjct: 1   MEMETSEDWEYTGTEDEHIPIDLFCSKEDARVPRGTLEFTNASGNMVFKVQHQPPN---- 56

Query: 73  KKLLLDASGNIIFSIY-RHEGSWKCYKGNGDGDKDLVFRVERTLKTLTRVELEVFFDGER 131
            KLLLD++ N +FSI+ RH G+WKCYKGNGD +K+LV +V+RTLKT++RV+L+VFF GER
Sbjct: 57  PKLLLDSNDNPLFSIHHRHNGTWKCYKGNGDENKELVLKVKRTLKTISRVKLKVFFAGER 116

Query: 132 PNNEGCDLKLRGSPFQRSCSIYKDTDLVAQ 161
            N   CDLK+ GSPF RSCSI KD DLVAQ
Sbjct: 117 LNKGVCDLKVIGSPFMRSCSISKDGDLVAQ 146


>Medtr7g072120.1 | LURP-one-like protein | HC |
           chr7:26795170-26797004 | 20130731
          Length = 212

 Score = 71.2 bits (173), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 46/138 (33%), Positives = 71/138 (51%), Gaps = 8/138 (5%)

Query: 32  PIDLFGSKKHAGAPRGVLAFADALGNILFTVNRHPPNRNYKKKLLLDASGNIIFSIYRH- 90
           P+DL   KK      G  A  D  GNI+F V          +++LLDA+GN I ++ R  
Sbjct: 33  PVDLAVVKKVMTISDGNFAVTDVNGNIVFKVKGSLLTLR-DRRVLLDAAGNPITTLRRKI 91

Query: 91  ---EGSWKCYKGNGDGDKDLVFRVERTLKTLTRVELEVFFDGERPNNEGCDLKLRGSPFQ 147
                 W+ Y+G     KDL+F ++R+     + +L+VF  G     + CD K+RGS  +
Sbjct: 92  VTMHDRWEAYRGESTHAKDLIFTLKRSSLIQMKTKLDVFLAGNT-KEDVCDFKVRGSWLE 150

Query: 148 RSCSIY--KDTDLVAQVQ 163
           RSC +Y  +  ++VAQ+ 
Sbjct: 151 RSCIVYAGESNNIVAQMH 168


>Medtr7g072270.2 | LURP-one-like protein | HC |
           chr7:26835816-26838300 | 20130731
          Length = 165

 Score = 67.8 bits (164), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 22/127 (17%)

Query: 49  LAFADALGNILF-------TVNRHPPNRNYKKKLLLDASGNIIFSIYRH----EGSWKCY 97
           L   D  GNI+F       T+  H        ++L+DA+GN I ++ R        W+ Y
Sbjct: 48  LTVTDVNGNIVFKVKGSVFTIRDH--------RVLVDAAGNPIITLRRKILTMHDRWEAY 99

Query: 98  KGNGDGDKDLVFRVERTLKTLTRVELEVFFDGERPNNEGCDLKLRGSPFQRSCSIY--KD 155
           +G     KDL+F ++R+     + +L+VF  G     + CD K++GS F+RSCS+Y  + 
Sbjct: 100 RGQSTNAKDLIFTLKRSSLMQFKTKLDVFLAGNT-KEDVCDFKVKGSWFERSCSVYAGES 158

Query: 156 TDLVAQV 162
            ++VAQV
Sbjct: 159 NNIVAQV 165


>Medtr7g072270.1 | LURP-one-like protein | HC |
           chr7:26835816-26838300 | 20130731
          Length = 212

 Score = 66.6 bits (161), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 67/128 (52%), Gaps = 22/128 (17%)

Query: 49  LAFADALGNILF-------TVNRHPPNRNYKKKLLLDASGNIIFSIYR----HEGSWKCY 97
           L   D  GNI+F       T+  H        ++L+DA+GN I ++ R        W+ Y
Sbjct: 48  LTVTDVNGNIVFKVKGSVFTIRDH--------RVLVDAAGNPIITLRRKILTMHDRWEAY 99

Query: 98  KGNGDGDKDLVFRVERTLKTLTRVELEVFFDGERPNNEGCDLKLRGSPFQRSCSIY--KD 155
           +G     KDL+F ++R+     + +L+VF  G     + CD K++GS F+RSCS+Y  + 
Sbjct: 100 RGQSTNAKDLIFTLKRSSLMQFKTKLDVFLAGNT-KEDVCDFKVKGSWFERSCSVYAGES 158

Query: 156 TDLVAQVQ 163
            ++VAQ+ 
Sbjct: 159 NNIVAQMH 166


>Medtr7g072170.1 | LURP-one-like protein | HC |
           chr7:26805158-26808002 | 20130731
          Length = 226

 Score = 65.9 bits (159), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 8/138 (5%)

Query: 32  PIDLFGSKKHAGAPRGVLAFADALGNILFTVNRHPPNRNYKKKLLLDASGNIIFSIYR-- 89
           P+DL   KK      G     D  GNI+F V          +++L+DA+ N I ++ R  
Sbjct: 33  PLDLAVVKKVIAISDGNFVVTDVNGNIVFKVKVSLLTFR-DRRVLVDAADNPITTLRRKI 91

Query: 90  --HEGSWKCYKGNGDGDKDLVFRVERTLKTLTRVELEVFFDGERPNNEGCDLKLRGSPFQ 147
                 W+ Y+G     KDL+F ++R+     + +L+VF        + CD K++GS F+
Sbjct: 92  VTMHDRWEAYRGESTDSKDLIFTLKRSSLIQMKTKLDVFL-ANNTKEDVCDFKVKGSWFE 150

Query: 148 RSCSIY--KDTDLVAQVQ 163
           RSC +Y  +  ++VAQ+ 
Sbjct: 151 RSCIVYAGESNNIVAQMH 168


>Medtr7g072140.1 | LURP-one-like protein | HC |
           chr7:26800151-26801873 | 20130731
          Length = 215

 Score = 65.1 bits (157), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 43/138 (31%), Positives = 71/138 (51%), Gaps = 8/138 (5%)

Query: 32  PIDLFGSKKHAGAPRGVLAFADALGNILFTVNRHPPNRNYKKKLLLDASGNIIFSIYRHE 91
           P+DL   KK      G  A  D  GNI+F V          +++L+DA+G  I ++ R  
Sbjct: 33  PVDLAVVKKVMTISDGNFAVTDVNGNIVFKVKGSLLTLR-DRRVLVDAAGYPIATLRRKI 91

Query: 92  GS----WKCYKGNGDGDKDLVFRVERTLKTLTRVELEVFFDGERPNNEGCDLKLRGSPFQ 147
            +    W+ ++G     KDL+F ++R+     + +L+VF    +  N  CD K++GS F 
Sbjct: 92  MTMHDRWEAFRGESTDAKDLIFTLKRSSLIQFKTKLDVFLASNKKENV-CDFKVKGSWFD 150

Query: 148 RSCSIY--KDTDLVAQVQ 163
           RSC +Y  +  ++VAQ+ 
Sbjct: 151 RSCIVYAGESNNIVAQMH 168


>Medtr7g072250.1 | tubby C 2 protein | HC | chr7:26824094-26831479 |
           20130731
          Length = 243

 Score = 58.2 bits (139), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 38/121 (31%), Positives = 63/121 (52%), Gaps = 12/121 (9%)

Query: 49  LAFADALGNILFTVNRHPPNRNYKKKLLLDASGNIIFSIYRH----EGSWKCYKGNGDGD 104
           L   D   NI+FTV     +R     LL+DA+ N I ++ R        W+ Y+G     
Sbjct: 83  LTITDVNDNIVFTVFTLGDHR-----LLVDAARNPIITLRRKILTMHDRWEAYRGQSTNA 137

Query: 105 KDLVFRVERTLKTLTRVELEVFFDGERPNNEGCDLKLRGSPFQRSCSIY--KDTDLVAQV 162
           K+++F V+R+     + +L+VF  G     + CD K++GS  +RSC +Y  +  ++VAQ+
Sbjct: 138 KNMIFTVKRSSLIQFKTKLDVFLAGNT-KEDVCDFKVKGSWSERSCIVYAGESNNIVAQM 196

Query: 163 Q 163
            
Sbjct: 197 H 197


>Medtr4g029430.1 | tubby C 2 protein | HC | chr4:10170282-10171673 |
           20130731
          Length = 199

 Score = 57.4 bits (137), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 8/100 (8%)

Query: 71  YKKKLLLDASGNIIFSIYRHEGS-----WKCYKGNGDGDKDLVFRVERTLKTLTRVELEV 125
           Y + LLLDA+G  +    R +       W+ ++G     KDL+F V+R+    T+++L+V
Sbjct: 58  YDQSLLLDAAGKSVVMTLRRKAMTGHDRWQAFRGESTEVKDLIFSVKRSTMFQTKIKLDV 117

Query: 126 FFDGERPNNEGCDLKLRGSPFQRSCSIY--KDTDLVAQVQ 163
           F        +  D K++GS  +RSC +Y  +   +VAQ+ 
Sbjct: 118 FL-ASNAKEDISDFKVKGSWLERSCVVYAGESHHIVAQMH 156


>Medtr7g071710.1 | LURP-one-like protein | HC |
           chr7:26583217-26582744 | 20130731
          Length = 118

 Score = 49.3 bits (116), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)

Query: 94  WKCYKGNGDGDKDLVFRVERTLKTLTRVELEVFFDGERPNNEGCDLKLRGSPFQRSCSIY 153
           W+ Y+G     KDL+F + ++     + +L+VF   +    + CD K++GS  +RSC +Y
Sbjct: 5   WEAYRGESTNSKDLIFTLRKSSLLQLKAKLDVFL-ADNTKEDVCDFKVKGSWLERSCIVY 63

Query: 154 K-DT-DLVAQVQ 163
             DT ++VAQ+ 
Sbjct: 64  AGDTNNIVAQMH 75


>Medtr1g014180.1 | tubby C 2 protein | LC | chr1:3083692-3082720 |
           20130731
          Length = 185

 Score = 47.8 bits (112), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 14/140 (10%)

Query: 32  PIDLFGSKKHAGAPRGVLAFADALGNILFTVNRHPPN--RNYKKKLLLDASGNIIFSIYR 89
           PIDL  + +     R      D   NI+FTV           + + L DA+GN I  + R
Sbjct: 17  PIDLIITTERTV--RDNFTIRDINDNIVFTVKSSLVTIVTPRQHRFLFDANGNPILHLRR 74

Query: 90  H----EGSWKCYKGNGDGDKDLVFRVERTLKTLTRVELEVFFDGERPNNEG-CDLKLRGS 144
                +  WK Y+G     KDL+F  +R+     R +L VF      NN G CD  ++ +
Sbjct: 75  SLLAADDCWKAYRGESTEPKDLIFTRKRSSLMQLRTKLNVFLAN---NNTGVCDFTVKAN 131

Query: 145 PFQRSCSIY--KDTDLVAQV 162
              +S ++Y  +  ++VAQ+
Sbjct: 132 LSGQSWNVYIGESNNVVAQI 151


>Medtr1g014150.1 | tubby C 2 protein | LC | chr1:3099896-3098026 |
           20130731
          Length = 190

 Score = 47.0 bits (110), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 9/112 (8%)

Query: 57  NILFTVNRHPPNRN-YKKKLLLDASGNIIFSIYRH--EGSWKCYKGNGDGDKDLVFRVER 113
           N++FTV  +      Y+ + L DA+GN I  + +      WK ++G      +L+F  +R
Sbjct: 47  NVVFTVKSNVAILTPYQNRFLFDANGNRILHLRKSLLNDCWKAFRGEISTQSNLIFTRKR 106

Query: 114 TLKTLTRVELEVFFDGERPNNEG-CDLKLRGSPFQRSCSIY--KDTDLVAQV 162
           +   +   + +VF    + NN G CD  ++G+ F  S ++Y  K  ++VAQ+
Sbjct: 107 SSLLMLWTKFDVFL---KNNNTGVCDFTVKGNLFGGSLNVYIGKSNNVVAQI 155