Miyakogusa Predicted Gene

Lj0g3v0276669.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0276669.1 Non Characterized Hit- tr|K3XM87|K3XM87_SETIT
Uncharacterized protein OS=Setaria italica GN=Si003010,48.72,3e-19,CAD
& PB1 domains,NULL; AUX_IAA,AUX/IAA protein; FAMILY NOT NAMED,NULL;
IAA_ARF,Aux/IAA-ARF-dimerisa,CUFF.18357.1
         (177 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g085750.1 | auxin-responsive AUX/IAA family protein | HC |...   228   2e-60
Medtr7g110790.1 | auxin-responsive AUX/IAA family protein | HC |...   201   2e-52
Medtr1g085750.2 | auxin-responsive AUX/IAA family protein | HC |...   196   7e-51
Medtr4g124300.1 | auxin-responsive AUX/IAA family protein | HC |...   135   1e-32
Medtr1g069495.1 | auxin response factor | HC | chr1:30104004-300...    91   6e-19
Medtr1g040675.1 | auxin response factor | HC | chr1:15063378-150...    88   5e-18
Medtr1g070830.1 | auxin-responsive AUX/IAA family protein | HC |...    86   3e-17
Medtr1g076270.1 | auxin response factor | HC | chr1:33944737-339...    84   7e-17
Medtr1g093350.1 | auxin response factor | HC | chr1:33849453-338...    84   7e-17
Medtr4g124300.2 | auxin-responsive AUX/IAA family protein | HC |...    81   6e-16
Medtr5g030710.2 | auxin-responsive AUX/IAA family protein | HC |...    77   1e-14
Medtr5g030710.1 | auxin-responsive AUX/IAA family protein | HC |...    77   1e-14
Medtr1g070520.1 | auxin-responsive AUX/IAA family protein | HC |...    76   1e-14
Medtr1g093240.1 | auxin-responsive AUX/IAA family protein | HC |...    75   3e-14
Medtr1g093240.2 | auxin-responsive AUX/IAA family protein | HC |...    75   4e-14
Medtr1g040675.2 | auxin response factor | HC | chr1:15063472-150...    75   4e-14
Medtr6g488150.1 | auxin response factor | HC | chr6:33216291-332...    74   5e-14
Medtr8g067530.1 | auxin-responsive AUX/IAA family protein | HC |...    74   9e-14
Medtr2g101500.1 | auxin-responsive AUX/IAA family protein | HC |...    74   9e-14
Medtr5g067350.1 | auxin response factor | HC | chr5:28450190-284...    74   1e-13
Medtr8g103030.1 | auxin-responsive AUX/IAA family protein | HC |...    73   2e-13
Medtr8g014520.2 | auxin response factor | HC | chr8:4572622-4568...    73   2e-13
Medtr8g014520.1 | auxin response factor | HC | chr8:4572622-4568...    73   2e-13
Medtr1g080860.1 | auxin-responsive AUX/IAA family protein | HC |...    72   3e-13
Medtr1g080860.2 | auxin-responsive AUX/IAA family protein | HC |...    72   4e-13
Medtr7g096090.1 | auxin-responsive AUX/IAA family protein | HC |...    71   5e-13
Medtr2g100780.1 | auxin-responsive AUX/IAA family protein | HC |...    71   5e-13
Medtr2g100780.4 | auxin-responsive AUX/IAA family protein | HC |...    71   5e-13
Medtr2g100780.2 | auxin-responsive AUX/IAA family protein | HC |...    71   5e-13
Medtr2g100780.3 | auxin-responsive AUX/IAA family protein | HC |...    71   7e-13
Medtr1g109510.1 | auxin-responsive AUX/IAA family protein | HC |...    69   2e-12
Medtr4g011880.1 | auxin-responsive AUX/IAA family protein | HC |...    68   5e-12
Medtr2g102490.1 | auxin-responsive AUX/IAA family protein | HC |...    64   5e-11
Medtr2g005240.1 | auxin response factor 2 | HC | chr2:92911-1033...    64   9e-11
Medtr7g062540.1 | auxin response factor 2 | HC | chr7:22756278-2...    64   1e-10
Medtr1g093240.3 | auxin-responsive AUX/IAA family protein | HC |...    62   2e-10
Medtr4g115075.1 | auxin-responsive AUX/IAA family protein | HC |...    62   4e-10
Medtr4g021580.1 | auxin response factor 2 | HC | chr4:7078271-70...    61   6e-10
Medtr8g027440.1 | auxin response factor 2 | HC | chr8:9733998-97...    60   8e-10
Medtr5g076270.1 | auxin response factor 2 | HC | chr5:32499847-3...    59   2e-09
Medtr4g128070.1 | auxin-responsive AUX/IAA family protein | HC |...    58   5e-09
Medtr3g064050.1 | auxin response factor 2 | HC | chr3:28806780-2...    56   2e-08
Medtr3g064050.2 | auxin response factor 2 | HC | chr3:28803320-2...    56   2e-08
Medtr3g106850.1 | auxin-responsive AUX/IAA family protein | HC |...    55   3e-08
Medtr4g021580.2 | auxin response factor 2 | HC | chr4:7078271-70...    54   6e-08
Medtr8g100050.1 | auxin response factor 2 | HC | chr8:40230869-4...    54   1e-07
Medtr8g101360.1 | auxin response factor 2 | HC | chr8:42569517-4...    52   4e-07
Medtr2g018690.1 | auxin response factor 2 | HC | chr2:5912688-59...    49   3e-06
Medtr1g024025.1 | auxin response factor 2 | LC | chr1:7778460-77...    48   5e-06
Medtr4g060460.2 | auxin response factor-like protein | HC | chr4...    47   7e-06
Medtr4g060460.1 | auxin response factor-like protein | HC | chr4...    47   8e-06

>Medtr1g085750.1 | auxin-responsive AUX/IAA family protein | HC |
           chr1:38333347-38334717 | 20130731
          Length = 176

 Score =  228 bits (582), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 120/154 (77%), Positives = 128/154 (83%), Gaps = 10/154 (6%)

Query: 27  LTHQHTEG--LQTDLRLGLGISTTQ-HVGSSTSRGHSWQPMQPDLSSSQAAEVNDCSDHN 83
           +THQ+ +   L  DL LGL ISTTQ +V  STSRGH WQP+Q      Q  EVNDCSD+N
Sbjct: 28  ITHQNPDQQHLFPDLNLGLSISTTQQYVDYSTSRGH-WQPIQ-----QQGGEVNDCSDYN 81

Query: 84  S-FFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTY 142
           S FFVKVYMEGIPIGRKLNLL HNGY ELV TLE MFDTTILWGTEMDGVQSERCHVLTY
Sbjct: 82  SAFFVKVYMEGIPIGRKLNLLAHNGYHELVNTLEQMFDTTILWGTEMDGVQSERCHVLTY 141

Query: 143 EDGEGDLIMVGDVPWEIFLSAVKRLKITRVDTFG 176
           EDGEGDLIMVGDVPWE+FLS+VKRLKITRVD FG
Sbjct: 142 EDGEGDLIMVGDVPWEMFLSSVKRLKITRVDAFG 175


>Medtr7g110790.1 | auxin-responsive AUX/IAA family protein | HC |
           chr7:45409781-45408778 | 20130731
          Length = 161

 Score =  201 bits (512), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 108/153 (70%), Positives = 113/153 (73%), Gaps = 22/153 (14%)

Query: 27  LTHQHTEGLQTDLRLGLGISTTQH--VGSSTSRGHSWQPMQPDLSSSQAAEVNDCSDHNS 84
           LTHQ    L TDL LGL IS TQH  VGSS SRG  WQ                  D+NS
Sbjct: 29  LTHQ----LPTDLSLGLTISPTQHFHVGSSISRG-QWQ---------------QNYDYNS 68

Query: 85  FFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYED 144
            +VKVYMEGIPIGRKLN+L H  Y ELVKTLEHMFDTTILWG EMDGVQ ERCHVLTYED
Sbjct: 69  LYVKVYMEGIPIGRKLNILAHQSYHELVKTLEHMFDTTILWGNEMDGVQPERCHVLTYED 128

Query: 145 GEGDLIMVGDVPWEIFLSAVKRLKITRVDTFGC 177
            EGDL+MVGDVPWE+FLS VKRLKITRVDTFGC
Sbjct: 129 EEGDLVMVGDVPWEMFLSTVKRLKITRVDTFGC 161


>Medtr1g085750.2 | auxin-responsive AUX/IAA family protein | HC |
           chr1:38333347-38334717 | 20130731
          Length = 157

 Score =  196 bits (499), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 105/136 (77%), Positives = 111/136 (81%), Gaps = 10/136 (7%)

Query: 27  LTHQHTEG--LQTDLRLGLGISTTQ-HVGSSTSRGHSWQPMQPDLSSSQAAEVNDCSDHN 83
           +THQ+ +   L  DL LGL ISTTQ +V  STSRGH WQP+Q      Q  EVNDCSD+N
Sbjct: 28  ITHQNPDQQHLFPDLNLGLSISTTQQYVDYSTSRGH-WQPIQ-----QQGGEVNDCSDYN 81

Query: 84  S-FFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTY 142
           S FFVKVYMEGIPIGRKLNLL HNGY ELV TLE MFDTTILWGTEMDGVQSERCHVLTY
Sbjct: 82  SAFFVKVYMEGIPIGRKLNLLAHNGYHELVNTLEQMFDTTILWGTEMDGVQSERCHVLTY 141

Query: 143 EDGEGDLIMVGDVPWE 158
           EDGEGDLIMVGDVPWE
Sbjct: 142 EDGEGDLIMVGDVPWE 157


>Medtr4g124300.1 | auxin-responsive AUX/IAA family protein | HC |
           chr4:51327848-51326632 | 20130731
          Length = 184

 Score =  135 bits (341), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 75/140 (53%), Positives = 87/140 (62%), Gaps = 5/140 (3%)

Query: 35  LQTDLRLGLGISTTQHVGSSTSRGHSWQPMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGI 94
           L TDL+LGL IS +            W P+   +  S  AE        S FVKVYMEGI
Sbjct: 49  LSTDLKLGLSISPSSQSQLPREETCDWPPINKSILRSTLAE----KQRPSLFVKVYMEGI 104

Query: 95  PIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDGEGDLIMVGD 154
           PIGRKLNLL H+ Y  L+K L HMF TTIL       + S   HVLTYED EGD +MVGD
Sbjct: 105 PIGRKLNLLEHHSYDGLIKALCHMFRTTILCPNS-QPLNSWNFHVLTYEDQEGDWMMVGD 163

Query: 155 VPWEIFLSAVKRLKITRVDT 174
           VPWE+FLS+VKRLKITR ++
Sbjct: 164 VPWEMFLSSVKRLKITRANS 183


>Medtr1g069495.1 | auxin response factor | HC |
           chr1:30104004-30099851 | 20130731
          Length = 272

 Score = 90.9 bits (224), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 51/106 (48%), Positives = 66/106 (62%), Gaps = 17/106 (16%)

Query: 84  SFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFD--TTILWGTEMDG------VQSE 135
           S FVKV M+GIPIGRK++L  H+ Y+ L +TLE MFD  TT +     +G       + E
Sbjct: 145 SPFVKVNMDGIPIGRKVDLSAHSSYETLAQTLEDMFDESTTSVTSKGSNGEDHNMTTRGE 204

Query: 136 R---------CHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITRV 172
           R           VLTYED EGD ++VGDVPW +FLS+V+RL+I R 
Sbjct: 205 RHSILLDGSSKFVLTYEDKEGDWMLVGDVPWGMFLSSVRRLRIMRT 250


>Medtr1g040675.1 | auxin response factor | HC |
           chr1:15063378-15065770 | 20130731
          Length = 186

 Score = 87.8 bits (216), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 53/139 (38%), Positives = 80/139 (57%), Gaps = 17/139 (12%)

Query: 49  QHVGSSTSRGHS------WQPMQPDLSSS-QAAEVNDCSDHNSFFVKVYMEGIPIGRKLN 101
           QHV SS++   +      W P++    ++ Q AEV         +VKV M+G P  RK++
Sbjct: 53  QHVESSSAAPPAKAKIVGWPPIRSYRKNTLQEAEVG------GIYVKVSMDGAPYLRKID 106

Query: 102 LLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFL 161
           L ++ GY EL+K LE MF  TI   +E +G +    +  TYED +GD ++VGDVPW++F+
Sbjct: 107 LRIYGGYPELLKALETMFKLTIGEYSEREGYKGSE-YAPTYEDKDGDWMLVGDVPWDMFV 165

Query: 162 SAVKRLKI---TRVDTFGC 177
           ++ KRL+I   T     GC
Sbjct: 166 TSCKRLRIMKGTEARGLGC 184


>Medtr1g070830.1 | auxin-responsive AUX/IAA family protein | HC |
           chr1:31369872-31371491 | 20130731
          Length = 204

 Score = 85.5 bits (210), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 4/96 (4%)

Query: 85  FFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYED 144
            ++KV M G P  RK++L V+  Y EL+K LE+MF  TI   +E +G       V TYED
Sbjct: 109 MYLKVSMAGAPYLRKIDLKVYKSYSELLKVLENMFKCTIGEYSEREGYNGSE-FVPTYED 167

Query: 145 GEGDLIMVGDVPWEIFLSAVKRLKITR---VDTFGC 177
            +GD ++VGDVPWE+F+S+ KRL+I +       GC
Sbjct: 168 KDGDWMLVGDVPWEMFMSSCKRLRIMKGSEAKGLGC 203


>Medtr1g076270.1 | auxin response factor | HC |
           chr1:33944737-33945503 | 20130731
          Length = 178

 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 17/135 (12%)

Query: 47  TTQHVGSSTSRGHS---------WQPMQPDLSSS-QAAEVNDCSDHNSFFVKVYMEGIPI 96
           T++  GS TS   +         W P++    +S Q AE +        +VKV ++G P 
Sbjct: 44  TSKDSGSKTSDDAAPPSKAKIVGWPPIRSYRKNSLQEAEAS------GIYVKVSLDGAPY 97

Query: 97  GRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVP 156
            RK++L V+ GY +L+K LE MF  TI   +E +G +    +  TYED +GD ++VGDVP
Sbjct: 98  LRKIDLRVYGGYAQLLKALESMFKLTIGNYSEKEGYKGSE-YEPTYEDKDGDWMLVGDVP 156

Query: 157 WEIFLSAVKRLKITR 171
           WE+F+++ KRL+I +
Sbjct: 157 WEMFVTSCKRLRIMK 171


>Medtr1g093350.1 | auxin response factor | HC |
           chr1:33849453-33847986 | 20130731
          Length = 178

 Score = 84.0 bits (206), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 17/135 (12%)

Query: 47  TTQHVGSSTSRGHS---------WQPMQPDLSSS-QAAEVNDCSDHNSFFVKVYMEGIPI 96
           T++  GS TS   +         W P++    +S Q AE +        +VKV ++G P 
Sbjct: 44  TSKDSGSKTSDDAAPPSKAKIVGWPPIRSYRKNSLQEAEAS------GIYVKVSLDGAPY 97

Query: 97  GRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVP 156
            RK++L V+ GY +L+K LE MF  TI   +E +G +    +  TYED +GD ++VGDVP
Sbjct: 98  LRKIDLRVYGGYAQLLKALESMFKLTIGNYSEKEGYKGSE-YEPTYEDKDGDWMLVGDVP 156

Query: 157 WEIFLSAVKRLKITR 171
           WE+F+++ KRL+I +
Sbjct: 157 WEMFVTSCKRLRIMK 171


>Medtr4g124300.2 | auxin-responsive AUX/IAA family protein | HC |
           chr4:51327848-51327301 | 20130731
          Length = 139

 Score = 80.9 bits (198), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 45/90 (50%), Positives = 51/90 (56%), Gaps = 4/90 (4%)

Query: 35  LQTDLRLGLGISTTQHVGSSTSRGHSWQPMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGI 94
           L TDL+LGL IS +            W P+   +  S  AE        S FVKVYMEGI
Sbjct: 49  LSTDLKLGLSISPSSQSQLPREETCDWPPINKSILRSTLAE----KQRPSLFVKVYMEGI 104

Query: 95  PIGRKLNLLVHNGYQELVKTLEHMFDTTIL 124
           PIGRKLNLL H+ Y  L+K L HMF TTIL
Sbjct: 105 PIGRKLNLLEHHSYDGLIKALCHMFRTTIL 134


>Medtr5g030710.2 | auxin-responsive AUX/IAA family protein | HC |
           chr5:13126019-13120497 | 20130731
          Length = 335

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 75/158 (47%), Gaps = 30/158 (18%)

Query: 44  GISTTQHVGSSTSRGHS---------WQPMQPDLSSSQAAEVNDCSDH-------NSFFV 87
           G +   H G+++  G +         W P++    +S A    + +D         + FV
Sbjct: 159 GTAGHNHAGAASVAGCAPASKAQVVGWPPIRSFRKNSMATASKNNNDEVDGKPGPAALFV 218

Query: 88  KVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILW--------GTEMDGVQSERC-- 137
           KV M+G P  RK++L  +  YQ+L   LE MF    L         G EM      R   
Sbjct: 219 KVSMDGAPYLRKVDLRTYATYQQLSSALEKMFSCFTLGQCGSHGAPGKEMMSESKLRDLL 278

Query: 138 ----HVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
               +VLTYED +GD ++VGDVPWE+F+   +RLKI +
Sbjct: 279 HGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCRRLKIMK 316


>Medtr5g030710.1 | auxin-responsive AUX/IAA family protein | HC |
           chr5:13126144-13120365 | 20130731
          Length = 335

 Score = 76.6 bits (187), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 51/158 (32%), Positives = 75/158 (47%), Gaps = 30/158 (18%)

Query: 44  GISTTQHVGSSTSRGHS---------WQPMQPDLSSSQAAEVNDCSDH-------NSFFV 87
           G +   H G+++  G +         W P++    +S A    + +D         + FV
Sbjct: 159 GTAGHNHAGAASVAGCAPASKAQVVGWPPIRSFRKNSMATASKNNNDEVDGKPGPAALFV 218

Query: 88  KVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILW--------GTEMDGVQSERC-- 137
           KV M+G P  RK++L  +  YQ+L   LE MF    L         G EM      R   
Sbjct: 219 KVSMDGAPYLRKVDLRTYATYQQLSSALEKMFSCFTLGQCGSHGAPGKEMMSESKLRDLL 278

Query: 138 ----HVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
               +VLTYED +GD ++VGDVPWE+F+   +RLKI +
Sbjct: 279 HGSEYVLTYEDKDGDWMLVGDVPWEMFIDTCRRLKIMK 316


>Medtr1g070520.1 | auxin-responsive AUX/IAA family protein | HC |
           chr1:31340838-31337022 | 20130731
          Length = 245

 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 64/114 (56%), Gaps = 13/114 (11%)

Query: 71  SQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMD 130
           S+ +E  + +++   FVKV M+G P  RK++L ++  Y EL   L  MF++      E  
Sbjct: 113 SEESEKKNSNNNPISFVKVSMDGAPYLRKVDLKMYKSYPELSDALAKMFNSFTTGNCESQ 172

Query: 131 GVQ-------------SERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
           G++             +   +V TYED +GD ++VGDVPWE+F+ + KRL+I +
Sbjct: 173 GIKDFMNESNKLMDLLNSSDYVPTYEDKDGDWMLVGDVPWEMFIDSCKRLRIMK 226


>Medtr1g093240.1 | auxin-responsive AUX/IAA family protein | HC |
           chr1:33903552-33900363 | 20130731
          Length = 236

 Score = 75.5 bits (184), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 22/132 (16%)

Query: 61  WQPMQPDLSSSQAAEVNDCSDHN--------SFFVKVYMEGIPIGRKLNLLVHNGYQELV 112
           W P++    +  A +VN+  D          + FVKV M+G P  RK++L ++  Y++L 
Sbjct: 87  WPPVRSYRKNMMAQKVNNTEDTEKTTSNTTAAAFVKVSMDGAPYLRKVDLTMYKTYKDLS 146

Query: 113 KTLEHMFD--TTILWGTE-----------MDGVQSERCHVLTYEDGEGDLIMVGDVPWEI 159
             L  MF   TT  +G +           MD + S   +V TYED +GD ++VGDVPWE+
Sbjct: 147 DALAKMFSSFTTGNYGAQGMIDFMNESKLMDLLNSSE-YVPTYEDKDGDWMLVGDVPWEM 205

Query: 160 FLSAVKRLKITR 171
           F+ + KRL+I +
Sbjct: 206 FVGSCKRLRIMK 217


>Medtr1g093240.2 | auxin-responsive AUX/IAA family protein | HC |
           chr1:33903552-33900946 | 20130731
          Length = 239

 Score = 75.1 bits (183), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 71/132 (53%), Gaps = 22/132 (16%)

Query: 61  WQPMQPDLSSSQAAEVNDCSDHN--------SFFVKVYMEGIPIGRKLNLLVHNGYQELV 112
           W P++    +  A +VN+  D          + FVKV M+G P  RK++L ++  Y++L 
Sbjct: 87  WPPVRSYRKNMMAQKVNNTEDTEKTTSNTTAAAFVKVSMDGAPYLRKVDLTMYKTYKDLS 146

Query: 113 KTLEHMFD--TTILWGTE-----------MDGVQSERCHVLTYEDGEGDLIMVGDVPWEI 159
             L  MF   TT  +G +           MD + S   +V TYED +GD ++VGDVPWE+
Sbjct: 147 DALAKMFSSFTTGNYGAQGMIDFMNESKLMDLLNSSE-YVPTYEDKDGDWMLVGDVPWEM 205

Query: 160 FLSAVKRLKITR 171
           F+ + KRL+I +
Sbjct: 206 FVGSCKRLRIMK 217


>Medtr1g040675.2 | auxin response factor | HC |
           chr1:15063472-15065737 | 20130731
          Length = 162

 Score = 74.7 bits (182), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 46/117 (39%), Positives = 67/117 (57%), Gaps = 14/117 (11%)

Query: 49  QHVGSSTSRGHS------WQPMQPDLSSS-QAAEVNDCSDHNSFFVKVYMEGIPIGRKLN 101
           QHV SS++   +      W P++    ++ Q AEV         +VKV M+G P  RK++
Sbjct: 53  QHVESSSAAPPAKAKIVGWPPIRSYRKNTLQEAEVG------GIYVKVSMDGAPYLRKID 106

Query: 102 LLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVPWE 158
           L ++ GY EL+K LE MF  TI   +E +G +    +  TYED +GD ++VGDVPWE
Sbjct: 107 LRIYGGYPELLKALETMFKLTIGEYSEREGYKGSE-YAPTYEDKDGDWMLVGDVPWE 162


>Medtr6g488150.1 | auxin response factor | HC |
           chr6:33216291-33219398 | 20130731
          Length = 254

 Score = 74.3 bits (181), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 20/131 (15%)

Query: 61  WQPMQPDLSSSQA--AEVNDCSDHNS----FFVKVYMEGIPIGRKLNLLVHNGYQELVKT 114
           W P++    +S A  ++ ND  D  +     +VKV M+G P  RK++L +   Y+EL   
Sbjct: 105 WPPIRSFRKNSMATQSQKNDNDDVEAKSGCLYVKVSMDGAPYLRKVDLKIFGTYKELSSA 164

Query: 115 LEHMFDTTILWGTEMDGV--QSERC------------HVLTYEDGEGDLIMVGDVPWEIF 160
           LE MF    +      GV  Q   C            +VLTYED +GD ++VGDVPW++F
Sbjct: 165 LEKMFSCFTISQFGSHGVFGQGNVCESRLMDLLHGSEYVLTYEDKDGDWMLVGDVPWKMF 224

Query: 161 LSAVKRLKITR 171
           + + KRL+I +
Sbjct: 225 IDSCKRLRIMK 235


>Medtr8g067530.1 | auxin-responsive AUX/IAA family protein | HC |
           chr8:28204029-28199991 | 20130731
          Length = 356

 Score = 73.6 bits (179), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 74/151 (49%), Gaps = 22/151 (14%)

Query: 42  GLGISTTQHVGSSTSRGHSWQPMQPDLSSSQAA------EVNDCSDHNSFFVKVYMEGIP 95
           G G   +    ++ ++   W P++    +S A       EV+      + FVKV M+G P
Sbjct: 188 GTGAPISGSAPAAKAQVVGWPPIRSFRKNSLATTSKNNDEVDGKPGAAALFVKVSMDGAP 247

Query: 96  IGRKLNLLVHNGYQELVKTLEHMFDTTILW--------GTEM-------DGVQSERCHVL 140
             RK++L  +  YQEL   LE MF    L         G EM       D +     +V+
Sbjct: 248 YLRKVDLRNYTTYQELSSDLEKMFSCFTLGQCGSHGGPGKEMLSESKLKDFLHGSE-YVV 306

Query: 141 TYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
           TYED +GD ++VGDVPW++F+   KRLKI +
Sbjct: 307 TYEDKDGDWMLVGDVPWDMFIDTCKRLKIMK 337


>Medtr2g101500.1 | auxin-responsive AUX/IAA family protein | HC |
           chr2:43637105-43634220 | 20130731
          Length = 326

 Score = 73.6 bits (179), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 44/148 (29%), Positives = 72/148 (48%), Gaps = 23/148 (15%)

Query: 47  TTQHVGSSTSRGH--SWQPMQPDLSSSQAAEVNDCSDH-------NSFFVKVYMEGIPIG 97
           T +H  +  ++     W P++    ++ A+ +   +D        +  +VKV M+G P  
Sbjct: 160 TNEHANAPAAKAQVVGWPPIRSFRKNTMASNLTKNNDEAEGKPEFDCLYVKVSMDGAPYL 219

Query: 98  RKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQ-----SERC---------HVLTYE 143
           RK++L  +N Y EL   LE MF    +      G+      SE           +VLTYE
Sbjct: 220 RKVDLKTYNNYMELSSALEKMFTCFTIGQCNSPGLPGKDGLSESSLRDLLHGSEYVLTYE 279

Query: 144 DGEGDLIMVGDVPWEIFLSAVKRLKITR 171
           D +GD ++VGDVPW +F  + +RL+I +
Sbjct: 280 DKDGDWMLVGDVPWGMFADSCRRLRIMK 307


>Medtr5g067350.1 | auxin response factor | HC |
           chr5:28450190-28454050 | 20130731
          Length = 347

 Score = 73.6 bits (179), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 15/101 (14%)

Query: 84  SFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQ---------- 133
           + FVKV M+G P  RK++L  +  Y EL  +LE MF    +   E  G Q          
Sbjct: 230 AVFVKVSMDGAPYLRKVDLKNYTAYSELSSSLEKMFSCFTIGQCESHGNQMLNETKLRDL 289

Query: 134 ---SERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
              SE  +V+TYED +GD ++VGDVPWE+F+   +RL+I +
Sbjct: 290 LHGSE--YVITYEDKDGDWMLVGDVPWEMFIDTCRRLRIMK 328


>Medtr8g103030.1 | auxin-responsive AUX/IAA family protein | HC |
           chr8:43394828-43391289 | 20130731
          Length = 293

 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 61/122 (50%), Gaps = 20/122 (16%)

Query: 65  QPDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTIL 124
           QP  + + A   ++C      +VKV MEG P  RK++L   + Y+EL   LE MF    +
Sbjct: 158 QPQKNDADAEAKSEC-----LYVKVSMEGAPYLRKVDLNGFSSYRELSSALEKMFSCFTI 212

Query: 125 WGTEMDGVQSERC---------------HVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKI 169
                 GV                    +VLTYED +GD ++VGDVPWE+F  + KRL+I
Sbjct: 213 SQCGSYGVSCREKNLSESRLVDLLHGSEYVLTYEDKDGDWMLVGDVPWEMFTESCKRLRI 272

Query: 170 TR 171
            +
Sbjct: 273 MK 274


>Medtr8g014520.2 | auxin response factor | HC | chr8:4572622-4568904
           | 20130731
          Length = 268

 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 15/102 (14%)

Query: 85  FFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERC------- 137
            FVK+ M+G+PIGRK+++  ++ Y++L   ++ +F   +       G+  ++        
Sbjct: 156 LFVKINMDGVPIGRKIDINAYDSYEKLSSAVDDLFRGLLEEINLSHGINKKQEEEDTGMK 215

Query: 138 --------HVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
                   + L YED EGD ++VGDVPW +F+S VKRL++++
Sbjct: 216 GSLTGSGEYTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVSK 257


>Medtr8g014520.1 | auxin response factor | HC | chr8:4572622-4568904
           | 20130731
          Length = 271

 Score = 72.8 bits (177), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 33/102 (32%), Positives = 59/102 (57%), Gaps = 15/102 (14%)

Query: 85  FFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERC------- 137
            FVK+ M+G+PIGRK+++  ++ Y++L   ++ +F   +       G+  ++        
Sbjct: 156 LFVKINMDGVPIGRKIDINAYDSYEKLSSAVDDLFRGLLEEINLSHGINKKQEEEDTGMK 215

Query: 138 --------HVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
                   + L YED EGD ++VGDVPW +F+S VKRL++++
Sbjct: 216 GSLTGSGEYTLVYEDNEGDKMLVGDVPWHMFVSTVKRLRVSK 257


>Medtr1g080860.1 | auxin-responsive AUX/IAA family protein | HC |
           chr1:35977175-35973245 | 20130731
          Length = 253

 Score = 72.0 bits (175), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 12/101 (11%)

Query: 83  NSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTIL--WGTEM--DGVQSERC- 137
           N  FVKV M+G P  RK++L ++  YQEL   L  MF +  +   G+++  D +   +  
Sbjct: 134 NGAFVKVSMDGAPYLRKVDLKLYKSYQELSDALAKMFSSFTIDNCGSQVTKDFMNESKLI 193

Query: 138 -------HVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
                  +V TYED +GD ++VGDVPWE+F+ + KRL+I +
Sbjct: 194 DLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVQSCKRLRIMK 234


>Medtr1g080860.2 | auxin-responsive AUX/IAA family protein | HC |
           chr1:35977175-35973245 | 20130731
          Length = 243

 Score = 71.6 bits (174), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 60/101 (59%), Gaps = 12/101 (11%)

Query: 83  NSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTIL--WGTEM--DGVQSERC- 137
           N  FVKV M+G P  RK++L ++  YQEL   L  MF +  +   G+++  D +   +  
Sbjct: 134 NGAFVKVSMDGAPYLRKVDLKLYKSYQELSDALAKMFSSFTIDNCGSQVTKDFMNESKLI 193

Query: 138 -------HVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
                  +V TYED +GD ++VGDVPWE+F+ + KRL+I +
Sbjct: 194 DLLNGSDYVPTYEDKDGDWMLVGDVPWEMFVQSCKRLRIMK 234


>Medtr7g096090.1 | auxin-responsive AUX/IAA family protein | HC |
           chr7:38527122-38532646 | 20130731
          Length = 250

 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 36/98 (36%), Positives = 57/98 (58%), Gaps = 12/98 (12%)

Query: 86  FVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQ------------ 133
           FVKV M+G P  RK++L ++  Y +L  +L  MF +  +   E  G++            
Sbjct: 134 FVKVSMDGAPYLRKVDLKMYTSYSQLSDSLGKMFSSFTIGNCESQGMKDFMNESKLMDLL 193

Query: 134 SERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
           +   +V TYED +GD ++VGDVPWE+F+ + KRL+I +
Sbjct: 194 NNSDYVPTYEDKDGDWMLVGDVPWEMFVESCKRLRIMK 231


>Medtr2g100780.1 | auxin-responsive AUX/IAA family protein | HC |
           chr2:43340473-43336605 | 20130731
          Length = 269

 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 23/107 (21%)

Query: 85  FFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMF--------DTTILWGTE-------- 128
            FVK+ M+G+PIGRK++L  ++ Y  L   ++ +F        D++   G          
Sbjct: 148 LFVKINMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKV 207

Query: 129 ----MDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
               +DG      + L YED EGD ++VGDVPW +F+S VKRL++ +
Sbjct: 208 ITGLLDGSGE---YTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLK 251


>Medtr2g100780.4 | auxin-responsive AUX/IAA family protein | HC |
           chr2:43340807-43336605 | 20130731
          Length = 269

 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 23/107 (21%)

Query: 85  FFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMF--------DTTILWGTE-------- 128
            FVK+ M+G+PIGRK++L  ++ Y  L   ++ +F        D++   G          
Sbjct: 148 LFVKINMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKV 207

Query: 129 ----MDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
               +DG      + L YED EGD ++VGDVPW +F+S VKRL++ +
Sbjct: 208 ITGLLDGSGE---YTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLK 251


>Medtr2g100780.2 | auxin-responsive AUX/IAA family protein | HC |
           chr2:43340473-43336605 | 20130731
          Length = 269

 Score = 71.2 bits (173), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 23/107 (21%)

Query: 85  FFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMF--------DTTILWGTE-------- 128
            FVK+ M+G+PIGRK++L  ++ Y  L   ++ +F        D++   G          
Sbjct: 148 LFVKINMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKV 207

Query: 129 ----MDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
               +DG      + L YED EGD ++VGDVPW +F+S VKRL++ +
Sbjct: 208 ITGLLDGSGE---YTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLK 251


>Medtr2g100780.3 | auxin-responsive AUX/IAA family protein | HC |
           chr2:43340462-43336605 | 20130731
          Length = 268

 Score = 70.9 bits (172), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 23/107 (21%)

Query: 85  FFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMF--------DTTILWGTE-------- 128
            FVK+ M+G+PIGRK++L  ++ Y  L   ++ +F        D++   G          
Sbjct: 148 LFVKINMDGVPIGRKVDLNAYHSYDNLSSAVDDLFRGLLKAQRDSSACGGNNKKEEEEKV 207

Query: 129 ----MDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
               +DG      + L YED EGD ++VGDVPW +F+S VKRL++ +
Sbjct: 208 ITGLLDGSGE---YTLVYEDNEGDRMLVGDVPWHMFVSTVKRLRVLK 251


>Medtr1g109510.1 | auxin-responsive AUX/IAA family protein | HC |
           chr1:49537832-49539058 | 20130731
          Length = 178

 Score = 69.3 bits (168), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/151 (32%), Positives = 77/151 (50%), Gaps = 14/151 (9%)

Query: 30  QHTEGLQTDLRLGLGISTTQHVGSSTSRGHSWQPMQ--PDLSSSQAAEVND-------CS 80
           +H +G+   + LGL + T QH    +S       +   P++ +S++   N         S
Sbjct: 23  KHDDGI---IDLGLSLGTVQHDAYHSSANLYDDDLMDWPNMKNSRSVHENFDEEIEGVQS 79

Query: 81  DHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVL 140
           +    +VKV M+G+ IGRK+ +L H GY  L   LE MF +  + G  +   +S   + L
Sbjct: 80  NERWAYVKVNMDGVSIGRKICILDHGGYSSLAIQLEDMFGSQSVSGIRL--FESGSEYSL 137

Query: 141 TYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
            Y+D E +   VGDV W+ F+  VKRL+I R
Sbjct: 138 FYKDSEDNWRTVGDVLWKEFVECVKRLRIAR 168


>Medtr4g011880.1 | auxin-responsive AUX/IAA family protein | HC |
           chr4:3041610-3037433 | 20130731
          Length = 178

 Score = 67.8 bits (164), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 8/113 (7%)

Query: 66  PDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILW 125
           P + S +   +N+ S     ++KV M+G P  RK++L +H GY EL   LE +F      
Sbjct: 59  PPVCSYRKKNMNEGS---KMYMKVSMDGAPYLRKIDLGLHKGYLELALALEKLFGCC--- 112

Query: 126 GTEMDGVQSERC-HVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKI-TRVDTFG 176
           G E     ++ C HV  YED +GD ++VGDVPWE+F+ + KRL+I  R D  G
Sbjct: 113 GIEEALKDADNCEHVPIYEDKDGDWMLVGDVPWEMFIESCKRLRIMKRSDAKG 165


>Medtr2g102490.1 | auxin-responsive AUX/IAA family protein | HC |
           chr2:44155116-44156253 | 20130731
          Length = 198

 Score = 64.3 bits (155), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 31/92 (33%), Positives = 53/92 (57%), Gaps = 8/92 (8%)

Query: 86  FVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTE--------MDGVQSERC 137
           +VKV ++G P  RK++L V+  Y  L+  L  MF T               MD  ++   
Sbjct: 88  YVKVAVDGAPYLRKVDLEVYECYDNLLTALNTMFSTNCFTIRNDLMNEKKFMDSRKNTNE 147

Query: 138 HVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKI 169
           ++ TYED +GD +++GDVPW++F+ + KR+++
Sbjct: 148 YLATYEDKDGDWMLLGDVPWKMFVESCKRIRL 179


>Medtr2g005240.1 | auxin response factor 2 | HC | chr2:92911-103331
           | 20130731
          Length = 671

 Score = 63.5 bits (153), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 58/99 (58%), Gaps = 13/99 (13%)

Query: 71  SQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMD 130
           SQ+ ++  C+       KV+M+G+ +GR ++L   +GY++L++ LE MFD       E +
Sbjct: 541 SQSRQIRSCT-------KVHMQGMAVGRAVDLTRFDGYEDLLRKLEEMFD------IEGE 587

Query: 131 GVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKI 169
              + +  ++ Y D E D++MVGD PW  F S V+++ I
Sbjct: 588 LCGATKKWLVVYTDNEDDMMMVGDDPWLEFCSVVRKMFI 626


>Medtr7g062540.1 | auxin response factor 2 | HC |
           chr7:22756278-22761697 | 20130731
          Length = 680

 Score = 63.5 bits (153), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 34/117 (29%), Positives = 58/117 (49%), Gaps = 14/117 (11%)

Query: 53  SSTSRGHSWQPMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELV 112
           +S  R     P+ P+ + S+      C+       KV M+G+ +GR ++L   +GY +L+
Sbjct: 546 ASKERKQEQLPISPNETQSKQTNSRSCT-------KVQMQGVAVGRAVDLTALDGYDQLI 598

Query: 113 KTLEHMFDTTILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKI 169
             LE +FD           +Q      + + D EGD+++VGD PW  F + V+R+ I
Sbjct: 599 DELEKLFDIK-------GQIQPRNKWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFI 648


>Medtr1g093240.3 | auxin-responsive AUX/IAA family protein | HC |
           chr1:33903407-33900363 | 20130731
          Length = 204

 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 22/119 (18%)

Query: 61  WQPMQPDLSSSQAAEVNDCSDHN--------SFFVKVYMEGIPIGRKLNLLVHNGYQELV 112
           W P++    +  A +VN+  D          + FVKV M+G P  RK++L ++  Y++L 
Sbjct: 87  WPPVRSYRKNMMAQKVNNTEDTEKTTSNTTAAAFVKVSMDGAPYLRKVDLTMYKTYKDLS 146

Query: 113 KTLEHMFD--TTILWGTE-----------MDGVQSERCHVLTYEDGEGDLIMVGDVPWE 158
             L  MF   TT  +G +           MD + S   +V TYED +GD ++VGDVPWE
Sbjct: 147 DALAKMFSSFTTGNYGAQGMIDFMNESKLMDLLNSSE-YVPTYEDKDGDWMLVGDVPWE 204


>Medtr4g115075.1 | auxin-responsive AUX/IAA family protein | HC |
           chr4:47460828-47458972 | 20130731
          Length = 208

 Score = 61.6 bits (148), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 19/120 (15%)

Query: 61  WQPMQPDLSSSQAAEVNDCSDH---------NSFFVKVYMEGIPIGRKLNLLVHNGYQEL 111
           W P+       +  E ND  DH         +  +VKV MEG+ I RK+NL +H+ +  L
Sbjct: 96  WPPVNCRRKKLRCNE-NDVEDHVVPIDGSHNHRNYVKVKMEGVGIARKVNLGMHHSFHTL 154

Query: 112 VKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
            +TL  MF+       + D  Q E    L Y+D EGD ++  D+ W  F+   +RLK+ +
Sbjct: 155 NQTLMDMFEK-----CDHDQQQYE----LVYQDKEGDWLLAQDISWRSFIECAQRLKLLK 205


>Medtr4g021580.1 | auxin response factor 2 | HC |
           chr4:7078271-7072794 | 20130731
          Length = 667

 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 57/108 (52%), Gaps = 12/108 (11%)

Query: 62  QPMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDT 121
           +P Q     +Q+ ++  CS   +   KV M+G+ +GR ++L   NGY +L+  LE +FD 
Sbjct: 538 EPQQVSPKETQSKQI--CSRSRT---KVQMQGVAVGRAVDLATLNGYDQLIGELEELFDI 592

Query: 122 TILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKI 169
                     +Q      + + D EGD+++VGD PW  F + V+R+ I
Sbjct: 593 K-------GQLQHRNTWEIVFTDDEGDMMLVGDDPWPEFCNMVRRIFI 633


>Medtr8g027440.1 | auxin response factor 2 | HC |
           chr8:9733998-9728759 | 20130731
          Length = 677

 Score = 60.5 bits (145), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 30/82 (36%), Positives = 49/82 (59%), Gaps = 7/82 (8%)

Query: 88  KVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDGEG 147
           KV MEG+ +GR L+L + +GY EL+  +E +FD           ++S+    +T+ D E 
Sbjct: 562 KVQMEGVAVGRALDLTMLSGYDELIDEVEKLFDIK-------GELRSQNKWRVTFTDNEN 614

Query: 148 DLIMVGDVPWEIFLSAVKRLKI 169
           D+++VGD PW  F + VK++ I
Sbjct: 615 DMMLVGDDPWPEFCNMVKKIFI 636


>Medtr5g076270.1 | auxin response factor 2 | HC |
           chr5:32499847-32489763 | 20130731
          Length = 841

 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 64/124 (51%), Gaps = 6/124 (4%)

Query: 46  STTQHVGSSTSRGHSWQPMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVH 105
           ++T  +G S+ +G  +  MQ      Q+A   D  +    FVKVY  G  +GR L++   
Sbjct: 677 ASTMPLGESSFQGSPYPCMQDSSELLQSAGQVDAQNQTPIFVKVYKSGS-VGRSLDISRF 735

Query: 106 NGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVK 165
           N Y EL + L  MF    + G   D ++S     L + D E D++++GD PWE F++ V 
Sbjct: 736 NSYHELREELAQMFG---IEGKFEDPLRS--GWQLVFVDRENDVLLLGDDPWESFVNNVW 790

Query: 166 RLKI 169
            +KI
Sbjct: 791 YIKI 794


>Medtr4g128070.1 | auxin-responsive AUX/IAA family protein | HC |
           chr4:53308708-53310353 | 20130731
          Length = 173

 Score = 57.8 bits (138), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 4/87 (4%)

Query: 87  VKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMF----DTTILWGTEMDGVQSERCHVLTY 142
           V V +EG  I ++++L  H  YQ L K L  MF    D        +D   +   HV+ Y
Sbjct: 70  VTVVLEGRSICQRISLHNHGSYQSLAKALRQMFVDCTDDCDAGDHHLDLSNAIPGHVIAY 129

Query: 143 EDGEGDLIMVGDVPWEIFLSAVKRLKI 169
           ED E DL++ GD+ W+ F+   KR++I
Sbjct: 130 EDMENDLLLAGDLTWKDFVRVAKRIRI 156


>Medtr3g064050.1 | auxin response factor 2 | HC |
           chr3:28806780-28798989 | 20130731
          Length = 849

 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 9/126 (7%)

Query: 44  GISTTQHVGSSTSRGHSWQPMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLL 103
           G ST   +G S  +G  +  MQ D S  Q AE  D  + N  FVKVY  G  +GR L++ 
Sbjct: 686 GAST--QLGESGFQGSLYACMQ-DSSFLQNAEQIDTQNQNPTFVKVYKSGS-VGRSLDIS 741

Query: 104 VHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSA 163
             + Y+EL + L  MF    + G   D ++S     L + D E D++++GD PWE F++ 
Sbjct: 742 RFSCYRELREELGQMFG---IEGKLEDPLRS--GWQLVFVDRENDVLLLGDDPWESFVNN 796

Query: 164 VKRLKI 169
           V  +KI
Sbjct: 797 VWYIKI 802


>Medtr3g064050.2 | auxin response factor 2 | HC |
           chr3:28803320-28798989 | 20130731
          Length = 612

 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/126 (36%), Positives = 67/126 (53%), Gaps = 9/126 (7%)

Query: 44  GISTTQHVGSSTSRGHSWQPMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLL 103
           G ST   +G S  +G  +  MQ D S  Q AE  D  + N  FVKVY  G  +GR L++ 
Sbjct: 449 GAST--QLGESGFQGSLYACMQ-DSSFLQNAEQIDTQNQNPTFVKVYKSGS-VGRSLDIS 504

Query: 104 VHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVPWEIFLSA 163
             + Y+EL + L  MF    + G   D ++S     L + D E D++++GD PWE F++ 
Sbjct: 505 RFSCYRELREELGQMFG---IEGKLEDPLRS--GWQLVFVDRENDVLLLGDDPWESFVNN 559

Query: 164 VKRLKI 169
           V  +KI
Sbjct: 560 VWYIKI 565


>Medtr3g106850.1 | auxin-responsive AUX/IAA family protein | HC |
           chr3:49381656-49382979 | 20130731
          Length = 213

 Score = 55.1 bits (131), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 6/100 (6%)

Query: 72  QAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDG 131
           + A  N        +VKV MEG+ +GR++NL ++N YQ L  +L  MF        E  G
Sbjct: 113 RKANENQNRRSKPLYVKVNMEGVGMGRQINLRLYNSYQTLKDSLISMF--VKCQNFEETG 170

Query: 132 VQSERCHVLTYEDGEGDLIMVGDVPWEIFLSAVKRLKITR 171
                 + LT+++ +G+  +   + W+ F+  V+RL I R
Sbjct: 171 AN----YTLTFQNKQGEWKLTSHITWQSFIGTVRRLAILR 206


>Medtr4g021580.2 | auxin response factor 2 | HC |
           chr4:7078271-7072794 | 20130731
          Length = 622

 Score = 54.3 bits (129), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/96 (31%), Positives = 50/96 (52%), Gaps = 12/96 (12%)

Query: 62  QPMQPDLSSSQAAEVNDCSDHNSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDT 121
           +P Q     +Q+ ++  CS   +   KV M+G+ +GR ++L   NGY +L+  LE +FD 
Sbjct: 538 EPQQVSPKETQSKQI--CSRSRT---KVQMQGVAVGRAVDLATLNGYDQLIGELEELFDI 592

Query: 122 TILWGTEMDGVQSERCHVLTYEDGEGDLIMVGDVPW 157
                     +Q      + + D EGD+++VGD PW
Sbjct: 593 K-------GQLQHRNTWEIVFTDDEGDMMLVGDDPW 621


>Medtr8g100050.1 | auxin response factor 2 | HC |
           chr8:40230869-40235830 | 20130731
          Length = 833

 Score = 53.5 bits (127), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/83 (31%), Positives = 50/83 (60%), Gaps = 6/83 (7%)

Query: 87  VKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTYEDGE 146
            KV+ +GI +GR ++L   + Y EL   L+ +F+    +  E+  +  ++  ++ + D E
Sbjct: 713 TKVHKKGIALGRSVDLTKFSDYDELTAELDQLFE----FRGEL--ISPQKDWLVVFTDNE 766

Query: 147 GDLIMVGDVPWEIFLSAVKRLKI 169
           GD+++VGD PW+ F S V+++ I
Sbjct: 767 GDMMLVGDDPWQEFCSMVRKIYI 789


>Medtr8g101360.1 | auxin response factor 2 | HC |
            chr8:42569517-42563540 | 20130731
          Length = 1096

 Score = 51.6 bits (122), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 12/87 (13%)

Query: 86   FVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHV---LTY 142
            + KVY  G  +GR +++  ++GY EL   L   F         ++G   +R  V   L Y
Sbjct: 986  YTKVYKRGA-VGRSIDITRYSGYDELKHDLARRFG--------IEGQLEDRQRVGWKLVY 1036

Query: 143  EDGEGDLIMVGDVPWEIFLSAVKRLKI 169
             D E D+++VGD PWE F++ V+ +KI
Sbjct: 1037 VDHENDVLLVGDDPWEEFVNCVRCIKI 1063


>Medtr2g018690.1 | auxin response factor 2 | HC |
           chr2:5912688-5906356 | 20130731
          Length = 908

 Score = 48.5 bits (114), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 6/87 (6%)

Query: 83  NSFFVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGVQSERCHVLTY 142
           N  FVKVY  G   GR L++   + Y EL   L  MF    L G   D V+S     L +
Sbjct: 774 NKTFVKVYKSGS-FGRSLDITKFSSYNELRSELARMFG---LEGELEDPVRS--GWQLVF 827

Query: 143 EDGEGDLIMVGDVPWEIFLSAVKRLKI 169
            D E D++++GD PW  F+++V  +KI
Sbjct: 828 VDRENDVLLLGDGPWPEFVNSVWCIKI 854


>Medtr1g024025.1 | auxin response factor 2 | LC |
           chr1:7778460-7771119 | 20130731
          Length = 1265

 Score = 48.1 bits (113), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 8/85 (9%)

Query: 86  FVKVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTT-ILWGTEMDGVQSERCHVLTYED 144
           + KV   G  +GR +++     Y+EL++ +E MF    +L  T+  G +      L Y D
Sbjct: 756 YTKVQKAG-SVGRSIDVTTFKNYEELIRAIECMFGLDGLLNDTKGSGWK------LVYVD 808

Query: 145 GEGDLIMVGDVPWEIFLSAVKRLKI 169
            E D+++VGD PWE F+  V+ ++I
Sbjct: 809 YESDVLLVGDDPWEEFVGCVRCIRI 833


>Medtr4g060460.2 | auxin response factor-like protein | HC |
           chr4:22234433-22239989 | 20130731
          Length = 787

 Score = 47.4 bits (111), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 10/84 (11%)

Query: 88  KVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGV--QSERCHVLTYEDG 145
           KV+ +G  +GR ++L   +GY +L+  LE +F         M+G+   S++   + Y D 
Sbjct: 662 KVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFG--------MEGLLRDSDKGWRILYTDS 713

Query: 146 EGDLIMVGDVPWEIFLSAVKRLKI 169
           E D+++VGD PW  F   V ++ I
Sbjct: 714 ENDIMVVGDDPWHEFCDVVSKIHI 737


>Medtr4g060460.1 | auxin response factor-like protein | HC |
           chr4:22234433-22239989 | 20130731
          Length = 792

 Score = 47.4 bits (111), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 10/84 (11%)

Query: 88  KVYMEGIPIGRKLNLLVHNGYQELVKTLEHMFDTTILWGTEMDGV--QSERCHVLTYEDG 145
           KV+ +G  +GR ++L   +GY +L+  LE +F         M+G+   S++   + Y D 
Sbjct: 667 KVHKQGSLVGRAIDLSRLSGYNDLLSELEKLFG--------MEGLLRDSDKGWRILYTDS 718

Query: 146 EGDLIMVGDVPWEIFLSAVKRLKI 169
           E D+++VGD PW  F   V ++ I
Sbjct: 719 ENDIMVVGDDPWHEFCDVVSKIHI 742