Miyakogusa Predicted Gene

Lj0g3v0276339.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0276339.2 Non Characterized Hit- tr|J3NCI5|J3NCI5_ORYBR
Uncharacterized protein OS=Oryza brachyantha
GN=OB12G1,48.42,6e-18,RNase_P_p30,RNase P subunit p30; seg,NULL; PHP
domain-like,Polymerase/histidinol phosphatase-like; n,CUFF.18343.2
         (591 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g096090.1 | polymerase/histidinol phosphatase-like protein...   543   e-154

>Medtr2g096090.1 | polymerase/histidinol phosphatase-like protein,
           putative | HC | chr2:41023372-41018051 | 20130731
          Length = 774

 Score =  543 bits (1399), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 326/607 (53%), Positives = 405/607 (66%), Gaps = 74/607 (12%)

Query: 1   MDWTRGQNLVFSSGAPSVNELRGPCDVANLLSLFGLSKEQAKAAISKNCRILLANSLRKK 60
           +DWTRG+++VFSS APSVNELRGPCDV NLL LFGLSKE+AK+AISKNCR+LLAN+LR+K
Sbjct: 199 IDWTRGRDIVFSSAAPSVNELRGPCDVGNLLLLFGLSKEEAKSAISKNCRVLLANALRRK 258

Query: 61  RFFKEAIRVEALPTNAESHSNEAWHQELLKWDPISSGEGDILLDDMEKPCKASC------ 114
           RF KEAIRVE L ++  SHS     QELLKWDP+SSGEGDILLDDME    ASC      
Sbjct: 259 RFHKEAIRVEVLSSDVASHS-----QELLKWDPLSSGEGDILLDDMENSGSASCKASKAA 313

Query: 115 KAIDFDSLMAGLSSKGFRIQDSLSTNKVSPVFPNNKVNFLPVTNKENQLTPLLNNVTEQP 174
           KAIDF  ++  L S+G+++QD L  N    +F  NKVNF+PV    NQ TP  +N+TEQP
Sbjct: 314 KAIDFVKILDNLPSEGYKVQDFLPGNDAVSIFSINKVNFMPVAENVNQSTPAPDNLTEQP 373

Query: 175 NRLDICPEQHESSLSVDITTRR--VSCDTFSEKNLQCETTEAFNSKEETDTETNATKLE- 231
           NR ++CP+Q ESS S+D  T+   V C  FSEKN+   T EAF+SK E DTETN  KLE 
Sbjct: 374 NRANVCPKQDESS-SLDGITKHHIVRCGNFSEKNVHNGTAEAFHSK-EIDTETNGAKLEL 431

Query: 232 ERLIDSDVPMDDMEKSFSTSCETSKTAEDIDFVSVDNSLPSHDFRTMDFLPANYVYPILP 291
           +  IDSDV MDD+EKSF+ SCE SK A+     +VD                 Y+     
Sbjct: 432 KNSIDSDVRMDDVEKSFTASCEASKIAK----ATVD----------------TYI----- 466

Query: 292 CNKGSLLPVSGKVNQSSPVSDNSTELPNKHDVCPQQDERSLYD---------------KK 336
              G+LLPVS K NQS+P  +N T+  ++  V   +DERSL                 +K
Sbjct: 467 --NGNLLPVSEKANQSTPEPNNLTKQSDRLRVSLAEDERSLLSDTVATDDVVSRDDLFEK 524

Query: 337 DLHSGTIEAFNSKKEIDTQTNATKLEKLNFIDSDV-----NVKALDSQSDLCISSDGVLD 391
           + H+GTI++FNSK EIDTQTNA KL   NFIDSDV     + K+LDSQSDLCISS+ VLD
Sbjct: 525 NTHNGTIQSFNSKVEIDTQTNAPKLGLPNFIDSDVDCTQLDAKSLDSQSDLCISSN-VLD 583

Query: 392 TVKSHENGKLVRSSDDPKLGSASNDHTEEIFTPPTNIKFPALVLDKHNNEKSSDVNLNAK 451
           T+K HEN K ++SS DP     + +   EI +P   + FPA    KH NE +SDVNLNA 
Sbjct: 584 TLKPHENEKPLKSSVDPH----NINEKVEISSPSIGVIFPATEHAKH-NENNSDVNLNAH 638

Query: 452 IVKIQEILPSEDSEVAENMVLEIKTSTHETSVEDALFDKRETDAVELDEMPQQTPFDEMQ 511
              +QE LP ED ++AE+ V+++ +ST  TSV D  F+K ETDAVE+DE+P QTPFDEM 
Sbjct: 639 FSTMQENLPKEDFKIAEHTVVDMNSSTSVTSVGDGQFNKPETDAVEVDELPDQTPFDEMN 698

Query: 512 TEGDDTVPTMHLLPVTMEDNNKLGEMSTDS-QFAAGQALSGRLRVKRRTSRGPLLFPLKR 570
           TE DD+   +H  P  M ++ KL E+STDS Q A+ Q+ SGRLRVKRRT   P+LFPLKR
Sbjct: 699 TE-DDSTAAIHSFPEVMVEDKKLVEVSTDSDQLASVQSDSGRLRVKRRT---PVLFPLKR 754

Query: 571 LLNQMPF 577
           LL+ +PF
Sbjct: 755 LLHMVPF 761