Miyakogusa Predicted Gene

Lj0g3v0275819.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0275819.1 Non Characterized Hit- tr|I3SST4|I3SST4_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2 SV=1,98.97,0,seg,NULL;
LDL receptor-like module,Low-density lipoprotein (LDL) receptor class
A repeat; N-LINKED O,CUFF.18291.1
         (196 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g079430.2 | glucosidase II beta subunit-like protein | HC ...   250   8e-67
Medtr4g079430.1 | glucosidase II beta subunit-like protein | HC ...   247   4e-66
Medtr4g083360.2 | glucosidase II beta subunit-like protein | HC ...   162   2e-40
Medtr4g083360.1 | glucosidase II beta subunit-like protein | HC ...   162   2e-40

>Medtr4g079430.2 | glucosidase II beta subunit-like protein | HC |
           chr4:30708724-30710878 | 20130731
          Length = 198

 Score =  250 bits (638), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 128/169 (75%), Positives = 138/169 (81%), Gaps = 9/169 (5%)

Query: 1   MDSHSFLCFHSACLLLFASTAGCLS--HPSLLGVHPLDEKYYGSEVIKCKDGSKSFSRDR 58
           MDS   LCFHS  LLL  STA CLS  HPS LGVHPLD +YY SE IKCKDGSKSFSRDR
Sbjct: 1   MDS---LCFHSV-LLLLVSTASCLSFSHPSFLGVHPLDAQYYSSEFIKCKDGSKSFSRDR 56

Query: 59  INDNFCDCPDGTDEPGTSACPKGKFYCKNLGSKPQFIFSSHVNDNFCDCCDGSDEYDGTI 118
           +ND+FCDC DGTDEPGTSAC  GKFYC+NLGSKPQFI SSHVND FCDCCDGSDEYDGTI
Sbjct: 57  LNDDFCDCSDGTDEPGTSACSAGKFYCRNLGSKPQFIVSSHVNDRFCDCCDGSDEYDGTI 116

Query: 119 HCPNTCVMGGNSEYMIGNYNKKV---SGFAEKETKNGVKSGESVRNLTG 164
            CPNTCVMGGN+E M GNYN KV   S F+EKET+NG K+ ES  +L+G
Sbjct: 117 RCPNTCVMGGNAENMYGNYNSKVRDQSVFSEKETENGAKAEESAHSLSG 165


>Medtr4g079430.1 | glucosidase II beta subunit-like protein | HC |
           chr4:30708724-30710906 | 20130731
          Length = 187

 Score =  247 bits (631), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 127/168 (75%), Positives = 137/168 (81%), Gaps = 9/168 (5%)

Query: 1   MDSHSFLCFHSACLLLFASTAGCLS--HPSLLGVHPLDEKYYGSEVIKCKDGSKSFSRDR 58
           MDS   LCFHS  LLL  STA CLS  HPS LGVHPLD +YY SE IKCKDGSKSFSRDR
Sbjct: 1   MDS---LCFHSV-LLLLVSTASCLSFSHPSFLGVHPLDAQYYSSEFIKCKDGSKSFSRDR 56

Query: 59  INDNFCDCPDGTDEPGTSACPKGKFYCKNLGSKPQFIFSSHVNDNFCDCCDGSDEYDGTI 118
           +ND+FCDC DGTDEPGTSAC  GKFYC+NLGSKPQFI SSHVND FCDCCDGSDEYDGTI
Sbjct: 57  LNDDFCDCSDGTDEPGTSACSAGKFYCRNLGSKPQFIVSSHVNDRFCDCCDGSDEYDGTI 116

Query: 119 HCPNTCVMGGNSEYMIGNYNKKV---SGFAEKETKNGVKSGESVRNLT 163
            CPNTCVMGGN+E M GNYN KV   S F+EKET+NG K+ ES  +L+
Sbjct: 117 RCPNTCVMGGNAENMYGNYNSKVRDQSVFSEKETENGAKAEESAHSLS 164


>Medtr4g083360.2 | glucosidase II beta subunit-like protein | HC |
           chr4:32439690-32431871 | 20130731
          Length = 644

 Score =  162 bits (410), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 77/145 (53%), Positives = 96/145 (66%), Gaps = 5/145 (3%)

Query: 5   SFLCFHSACLLLFASTAGCLSHPS--LLGVHPLDEKYY-GSEVIKCKDGSKSFSRDRIND 61
               F    LL+F +     S P    LG+ P DEKYY  S+VI+CKDGS +F++D++ND
Sbjct: 4   QLRIFLIPLLLVFLAPLSSSSKPKDPFLGIAPQDEKYYKSSDVIRCKDGSANFNKDQLND 63

Query: 62  NFCDCPDGTDEPGTSACPKGKFYCKNLGSKPQFIFSSHVNDNFCDCCDGSDEYDGTIHCP 121
           +FCDCPDGTDEPGTSACP+GKFYC+N G  P ++FSS VND  CDCCDGSDEYDG   C 
Sbjct: 64  DFCDCPDGTDEPGTSACPRGKFYCRNAGHSPLYLFSSRVNDGICDCCDGSDEYDGKAKCS 123

Query: 122 NTCVMGGNSEYMIGNYNKKVSGFAE 146
           NTC   G +        KK++ + E
Sbjct: 124 NTCWEAGKA--AREKLRKKIATYQE 146


>Medtr4g083360.1 | glucosidase II beta subunit-like protein | HC |
           chr4:32439690-32431871 | 20130731
          Length = 639

 Score =  162 bits (410), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 77/145 (53%), Positives = 96/145 (66%), Gaps = 5/145 (3%)

Query: 5   SFLCFHSACLLLFASTAGCLSHPS--LLGVHPLDEKYY-GSEVIKCKDGSKSFSRDRIND 61
               F    LL+F +     S P    LG+ P DEKYY  S+VI+CKDGS +F++D++ND
Sbjct: 4   QLRIFLIPLLLVFLAPLSSSSKPKDPFLGIAPQDEKYYKSSDVIRCKDGSANFNKDQLND 63

Query: 62  NFCDCPDGTDEPGTSACPKGKFYCKNLGSKPQFIFSSHVNDNFCDCCDGSDEYDGTIHCP 121
           +FCDCPDGTDEPGTSACP+GKFYC+N G  P ++FSS VND  CDCCDGSDEYDG   C 
Sbjct: 64  DFCDCPDGTDEPGTSACPRGKFYCRNAGHSPLYLFSSRVNDGICDCCDGSDEYDGKAKCS 123

Query: 122 NTCVMGGNSEYMIGNYNKKVSGFAE 146
           NTC   G +        KK++ + E
Sbjct: 124 NTCWEAGKA--AREKLRKKIATYQE 146