Miyakogusa Predicted Gene

Lj0g3v0275659.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0275659.3 Non Characterized Hit- tr|Q69KN1|Q69KN1_ORYSJ
Putative SMA-9 class B OS=Oryza sativa subsp.
japonica,28.83,0.0002,seg,NULL,CUFF.18278.3
         (443 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g085130.1 | hypothetical protein | LC | chr6:32102407-3209...   153   3e-37
Medtr6g085080.1 | mediator complex subunit 25 von willebrand fac...   153   4e-37
Medtr6g085100.1 | mediator complex subunit 25 von willebrand fac...   147   1e-35

>Medtr6g085130.1 | hypothetical protein | LC |
           chr6:32102407-32098176 | 20130731
          Length = 624

 Score =  153 bits (387), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 219/476 (46%), Gaps = 82/476 (17%)

Query: 2   GDQITEDP--NALRNESPLVFPNATNYMHASSPSFEYPMNHFDDIVPDLGAENDFLRASK 59
           G+ IT +P   +  N   LV   AT+  +         MN ++DI+ +L  ++D    +K
Sbjct: 176 GNTITPEPVSTSQHNSQELVLSKATDQENVVQ------MNLYEDIMSELDRDDDLFTPNK 229

Query: 60  KPKTFTALEDGIP-ENLFHQDE--------------LNSTVINNSVREEQRMHTEKNVPV 104
           + KTF  LED    ++ F  DE                       +  E+ +  ++ +P 
Sbjct: 230 RSKTFAPLEDDADLKDFFKFDENTFFDGFDQFLEQQDQQVSNQQQIPTEEAVFNQQQIPT 289

Query: 105 E-AIETVETELEPTLRVVSQNISNNQTSNMDLTANS--EVNMSGQVVANAEPTFTTEQGS 161
           E A      EL+  L   S+N S  QT+N++ T +S  EVN   + VA   P     +GS
Sbjct: 290 EEAGVDFANELQEILNGASRNTSTAQTANVECTTSSFQEVN---KYVA---PASNAGEGS 343

Query: 162 STRLLQTLTPRRDKN----TKNHVISSKNYSTSAFSVPQYXXXXXXXWTDQGPMQQACHP 217
           ST LL     +   N    T    + S+++ T+AF+                        
Sbjct: 344 STGLLHESNLQSWYNPHAMTSTSKLDSQSFPTNAFNG----------------------- 380

Query: 218 QLGMTSISSRLGIVDQDDPRQFHYDASFGSSMIPSAVENSPMQ-FQPNSAPVVPVLHDAT 276
              MTS S+        D + F  +A  G+    +A+ NS MQ  QP S+         +
Sbjct: 381 --NMTSKSTF-------DSQSFPTNAFNGNFTFSNAMGNSQMQQLQPGSSQNQ---FSMS 428

Query: 277 SQYVRGPMGNFSGKP--------TEHVTMTSYGPLNTPPMGPTTSVPPMPGMAPTIYXXX 328
             + RG +GNFSG+P         + +   +    N P  G  T + PMP ++P+ Y   
Sbjct: 429 PGFARGQIGNFSGQPMGQHFQAYNQFLRNNNTAAYNLPAFGANTWLRPMPSLSPS-YPSA 487

Query: 329 XXXXXXXXXXXXYVQTWEGSLAAKFQPNHVSLIKAQAFSKATPPFSLTLQWSSRLEISNF 388
                       YVQTWEG+LA K   + +++++A+AF K+  P +LTL W  RLEIS++
Sbjct: 488 SMYFPTLEEIQDYVQTWEGTLAGKITSSRMTILRAKAFRKSNTPLTLTLGWPGRLEISHY 547

Query: 389 LPEKAVNYTKCLSRPVYYVFLNTLSKSN-KLYEHLLSKKLCAKIDFSHQSLILSPT 443
             ++ +N+T+  ++P++Y+F +    +N  LY+HL +  LCAK+D   QS+ILSPT
Sbjct: 548 FHQRTLNHTRRFTQPIHYLFFHVAKYNNVDLYKHLKTSYLCAKVDLQFQSIILSPT 603


>Medtr6g085080.1 | mediator complex subunit 25 von willebrand factor
           type A protein | LC | chr6:32077390-32069017 | 20130731
          Length = 713

 Score =  153 bits (386), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 210/436 (48%), Gaps = 73/436 (16%)

Query: 38  MNHFDDIVPDLGAENDFLRASKKPKTFTALEDGIP-ENLFHQDELNSTVINNSVREEQRM 96
           MN ++DI+ +L  ++D    +K+ KTF  LED    ++ F  D+      +  ++++Q++
Sbjct: 303 MNLYEDIMSELD-DDDLFTPNKRSKTFAPLEDDPDLQDFFKFDQNPFEGFDQFIKQDQQV 361

Query: 97  HTEKNVPVEA-------IETVET------ELEPTLRVVSQNISNNQTSNMDLTANS--EV 141
             ++ +P E        I T E       EL+  L   S+N S  QT+N++ T +S  EV
Sbjct: 362 FNQQEIPTEEAVFNQQQIPTEEAGVDFANELQEILNGASRNTSTAQTANVECTTSSFQEV 421

Query: 142 NMSGQVVANAEPTFTTEQGSSTRLLQTLTPRRDKN----TKNHVISSKNYSTSAFSVPQY 197
           N   + VA   P     +GSST LL     +   N    T    + S+++ T+AF+    
Sbjct: 422 N---KYVA---PASNVGEGSSTGLLHESNLQSWYNPHAMTSTSKLDSQSFPTNAFNG--- 472

Query: 198 XXXXXXXWTDQGPMQQACHPQLGMTSISSRLGIVDQDDPRQFHYDASFGSSMIPSAVENS 257
                                  MTS S+        D R F  +   G+  + + + NS
Sbjct: 473 ----------------------NMTSTSTL-------DSRSFSTNNFNGNFTLSNVMGNS 503

Query: 258 PMQ-FQPNSAPVVPVLHDATSQYVRGPMGNFSGKP--------TEHVTMTSYGPLNTPPM 308
            MQ  QP S+         +  + RG +GNFS +P         + +   +    N P  
Sbjct: 504 QMQQLQPGSSQNQ---FSMSPGFARGQVGNFSVQPMGQHFQACNQFLRNNNTASYNLPAF 560

Query: 309 GPTTSVPPMPGMAPTIYXXXXXXXXXXXXXXXYVQTWEGSLAAKFQPNHVSLIKAQAFSK 368
           G  T + PMP ++P+ Y               YVQTWEG+LA K   + +++++A+AF K
Sbjct: 561 GANTWLRPMPSLSPS-YPSASMCFPTLKEIQDYVQTWEGTLAGKITSSRITILRAKAFRK 619

Query: 369 ATPPFSLTLQWSSRLEISNFLPEKAVNYTKCLSRPVYYVFLNTLSKSN-KLYEHLLSKKL 427
           ++ P +LTL W  RLEISN+LP+KA+ +T+  S+P++Y+F +    SN  LY H  ++  
Sbjct: 620 SSTPPTLTLDWPGRLEISNYLPQKALLHTRRFSQPIHYLFFHVAKYSNVDLYNHCKTRNN 679

Query: 428 CAKIDFSHQSLILSPT 443
           CAK+D   Q++ILSPT
Sbjct: 680 CAKVDLQFQTIILSPT 695


>Medtr6g085100.1 | mediator complex subunit 25 von willebrand factor
           type A protein | LC | chr6:32089756-32081059 | 20130731
          Length = 752

 Score =  147 bits (372), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 141/483 (29%), Positives = 219/483 (45%), Gaps = 64/483 (13%)

Query: 1   MGDQITEDPNAL---------RNESPLVFPNATNYMHASSPSFEYPMNHFDDIVPDLGAE 51
           +GD+I E  NA+          N   LV   AT+  +         MN ++DI+ +L ++
Sbjct: 273 IGDRIHETGNAITPEPVSTSQHNSQELVVSKATDQENIVQ------MNLYEDIMSELDSD 326

Query: 52  NDFLRASKKPKTFTALEDGIPENLFHQDELNSTVIN-NSVREEQRMHTEKNVPV---EAI 107
           +D  + +K+ KTF  LED      F + + N+     +   E+Q         +   EA 
Sbjct: 327 DDLFKPNKRSKTFAPLEDDADLQDFFKFDQNTFFDGFDQFLEQQDQQVMNQQQIPTEEAG 386

Query: 108 ETVETELEPTLRVVSQNISNNQTSNMDLTANS--EVNMSGQVVANAEPTFTTEQGSSTRL 165
                EL+  L   S+N S  QT+N++ T +S  EVN+  + +    P     +GSST L
Sbjct: 387 VDFAKELQEILNGASRNTSTAQTANVECTTSSFQEVNVQPEELRAPAPN--AGEGSSTGL 444

Query: 166 LQTLTPRRDKN----TKNHVISSKNYSTSAFSVPQYXXXXXXXWTDQGPMQQACHPQLGM 221
           L     +   N    T    + S+++ T+AF+            T      Q  +    M
Sbjct: 445 LHESNLQLWYNPHAMTSTSTLDSQSFPTNAFN-----GNMTSISTLDSQSSQTNNFNRNM 499

Query: 222 TSISSRLGIVDQDDPRQFHYDASFGSSMIPSAVENSPMQFQPNSAPVVPV-LHDATSQYV 280
           TS S+        D + F  +A  G+    + + NS MQ QP   PV           + 
Sbjct: 500 TSTSTL-------DSQSFPTNAFNGNFTFSNVMANSQMQ-QPQ--PVSSQNQFSGFPGFA 549

Query: 281 RGPMGNFSGKPTEHVTMTSYGPL-------------------NTPPMGPTTSVPPMPGMA 321
           RG +GNFSG+P       S  P+                   N P  G  T + PM  ++
Sbjct: 550 RGQIGNFSGQPVGQTGNFSGQPVGQHFQAYNHFLRNNNTAAYNLPAFGANTWLRPMQSLS 609

Query: 322 PTIYXXXXXXXXXXXXXXXYVQTWEGSLAAKFQPNHVSLIKAQAFSKATPPFSLTLQWSS 381
           P+ Y               YVQTWEG+LA K   +  ++++A+AF K++ P +LTL W  
Sbjct: 610 PS-YPSARMHFPTLEEIQDYVQTWEGTLAGKITSSRTTILRAKAFKKSSTPPTLTLGWPG 668

Query: 382 RLEISNFLPEKAVNYTKCLSRPVYYVFLNTLSKSN-KLYEHLLSKKLCAKIDFSHQSLIL 440
           RLEISN+LP+KA+ +T+  S+P++Y+F +     N  LY H  ++  CAK+D   Q++IL
Sbjct: 669 RLEISNYLPQKALLHTRRFSQPIHYLFFHVAKYGNVDLYNHCKTRNNCAKVDLQFQTIIL 728

Query: 441 SPT 443
           SPT
Sbjct: 729 SPT 731