Miyakogusa Predicted Gene

Lj0g3v0275389.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0275389.1 tr|G7IMM8|G7IMM8_MEDTR Wall-associated receptor
kinase-like protein OS=Medicago truncatula
GN=MTR_2g,44.19,0.0000000001, ,CUFF.18252.1
         (90 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g031520.1 | wall associated kinase-like protein | HC | chr...    70   3e-13
Medtr2g031530.1 | wall associated kinase-like protein | HC | chr...    65   2e-11

>Medtr2g031520.1 | wall associated kinase-like protein | HC |
           chr2:11843100-11845944 | 20130731
          Length = 712

 Score = 70.5 bits (171), Expect = 3e-13,   Method: Composition-based stats.
 Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 17/86 (19%)

Query: 7   CHGKYCCETSLPTHFAEYNATMENLISMNHAMRSSNQCSYAVIASLQSYYEYWNDGYAYQ 66
           C+G+YCCETSLPTH +EYNAT + L     + +S +QCSYA+I S     + W       
Sbjct: 176 CNGRYCCETSLPTHLSEYNATFQGL-----SEQSIDQCSYALILS-----DNW-----IS 220

Query: 67  YDDS--SIVREMKHLHHVPAVLEWEI 90
           +D S  S   E+ ++ + PA+LEWEI
Sbjct: 221 FDGSYLSTFNELGNMEYAPAMLEWEI 246


>Medtr2g031530.1 | wall associated kinase-like protein | HC |
           chr2:11847746-11850844 | 20130731
          Length = 726

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 6/84 (7%)

Query: 7   CHGKYCCETSLPTHFAEYNATMENLISMNHAMRSSNQCSYAVIASLQSYYEYWNDGYAYQ 66
           C+G+YCCETSLP H +EYNAT++ L   N      ++CSYA+I S +  Y      Y   
Sbjct: 177 CNGRYCCETSLPMHLSEYNATLQGLRGPN-----ISECSYALILSRRWVYFDGLSSYLST 231

Query: 67  YDDSSIVREMKHLHHVPAVLEWEI 90
           Y   +   +++ + + PA+LEWEI
Sbjct: 232 YYLENF-NKLEDMEYAPAMLEWEI 254