Miyakogusa Predicted Gene

Lj0g3v0275219.2

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0275219.2 Non Characterized Hit- tr|F6H856|F6H856_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,32.96,2e-18,seg,NULL,CUFF.18238.2
         (163 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g028290.1 | receptor-like kinase | HC | chr1:9493222-94961...   163   5e-41
Medtr1g031580.1 | receptor-like kinase | HC | chr1:11039443-1104...    61   6e-10
Medtr1g031320.1 | receptor-like kinase | HC | chr1:10928831-1093...    49   2e-06
Medtr1g027040.1 | receptor-like kinase | LC | chr1:8925788-89278...    48   3e-06
Medtr1g027150.1 | receptor-like kinase | LC | chr1:8961183-89632...    47   5e-06

>Medtr1g028290.1 | receptor-like kinase | HC | chr1:9493222-9496168
           | 20130731
          Length = 595

 Score =  163 bits (413), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 89/167 (53%), Positives = 109/167 (65%), Gaps = 6/167 (3%)

Query: 1   MSATPFHFLENPFYHANYTLFNCSSMNTALNXXXXXXX-XXXXXXKVYALNSSLRIKDVT 59
           +++TPFHF++N   ++NYTLFNCSSMNTAL               +VYALNS+L++KDVT
Sbjct: 114 VTSTPFHFIDNS--NSNYTLFNCSSMNTALQSYYSSITCLSSNGYEVYALNSTLQLKDVT 171

Query: 60  LSYCTKLYDLPSVPS-YVFHQQNDLILSWDESCDNQ--TNHECYKILHKSKGPWKKVEXX 116
           L+YCTKLYD+  VP   VF   +DLIL WD SC N+  T HECY  ++KSKG  KKVE  
Sbjct: 172 LTYCTKLYDMSFVPEDVVFSHGDDLILGWDTSCGNESETEHECYNNVNKSKGAGKKVEIL 231

Query: 117 XXXXXXXXXXXXXXXXYRVRYTSQKDKENQARIENFLENYRALKPTR 163
                           Y  RY +QKDKEN+ARIE FLE+YRALKPTR
Sbjct: 232 VPILSCLGILLLVTVLYHFRYRTQKDKENEARIEKFLEDYRALKPTR 278


>Medtr1g031580.1 | receptor-like kinase | HC |
           chr1:11039443-11041808 | 20130731
          Length = 616

 Score = 60.8 bits (146), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 74/175 (42%), Gaps = 12/175 (6%)

Query: 1   MSATPFHFLENPFYH-ANYTLFNCSSMNTALNXXXXXXXXXXXXXKVYALNSSLRIKDVT 59
           +S + F++L++ +    ++  FNCS +N                 ++YA+ SS  I+D+ 
Sbjct: 116 LSESHFNYLKHDYDDFVDHHFFNCSLLNRDWMDSYSVSCLRTSTSQIYAIPSSTNIEDLP 175

Query: 60  LSYCTKLYDLPSVPSYVFH-----------QQNDLILSWDESCDNQTNHECYKILHKSKG 108
           LS+CTK++++   PS               +    I  W  +  N  N E   +    KG
Sbjct: 176 LSFCTKMFNVSFKPSDSLRLTWSEPNCKHCESKGKICGWKNTTSNSDNKEVDCVPKNKKG 235

Query: 109 PWKKVEXXXXXXXXXXXXXXXXXXYRVRYTSQKDKENQARIENFLENYRALKPTR 163
             K +                   + +  +    KE QA IE FLE+YRALKPTR
Sbjct: 236 SSKALVNTGSILGSLFFILLIGGVFHIYDSYILRKEKQAIIEKFLEDYRALKPTR 290


>Medtr1g031320.1 | receptor-like kinase | HC |
           chr1:10928831-10931369 | 20130731
          Length = 620

 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 44/140 (31%), Positives = 62/140 (44%), Gaps = 21/140 (15%)

Query: 45  KVYALNSSLRIKDVTLSYCTKLYDLPSV-PSY--VFHQQNDLILSWDES----------- 90
           + YA+ +   IK   L++CTK+Y++  + PSY     ++N L L W E            
Sbjct: 155 QTYAIPAYEPIKFFPLTFCTKMYNVSVMGPSYSGTIPKKNFLRLKWSEPNCKHCESEGKR 214

Query: 91  CD------NQTNHECYKIL-HKSKGPWKKVEXXXXXXXXXXXXXXXXXXYRVRYTSQKDK 143
           CD      N TN E Y    + +KG    +                   Y +  +  + K
Sbjct: 215 CDWKNTTSNSTNKEVYCFAKNNNKGSSTTLVNTGSILGSLFFVLLTGAIYHIYDSYIQKK 274

Query: 144 ENQARIENFLENYRALKPTR 163
           E QA IE FLE+YRALKPTR
Sbjct: 275 EKQAIIEKFLEDYRALKPTR 294


>Medtr1g027040.1 | receptor-like kinase | LC | chr1:8925788-8927830
           | 20130731
          Length = 575

 Score = 48.1 bits (113), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 73/165 (44%), Gaps = 8/165 (4%)

Query: 6   FHFLENPFYHANYTLFNCSSMNT---ALNXXXXXXXXXXXXXKVYALNSSLRIKDVTLSY 62
           F+  ++ F + N T FNCSS+                      +YA +S+  + ++ L  
Sbjct: 87  FYPFQSDFSYNNITFFNCSSVGVHHLKSWDQRNPDVQDMLSCPIYATDSTESVVELDLLS 146

Query: 63  CTKLYD--LPSVPSYVFHQQNDLILSWDESCDNQTNHECYKILHKSKGPWKKVEXXXXXX 120
           CT++++  LP   SY + + N L LSW E+       E  +I +KSK     +       
Sbjct: 147 CTRMFNKVLPVTASY-YIRYNALSLSWSETAFPSQCLEYDQIHNKSKKNLTSIILVTTGA 205

Query: 121 XXXXXXXXXXXXYRVR-YTSQKDK-ENQARIENFLENYRALKPTR 163
                         +R Y   + K E+Q R+ENFL++Y A KPTR
Sbjct: 206 IVGSTMLVVLIGVFIRVYVHFRTKGEDQMRLENFLKDYEASKPTR 250


>Medtr1g027150.1 | receptor-like kinase | LC | chr1:8961183-8963268
           | 20130731
          Length = 572

 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 63/150 (42%), Gaps = 8/150 (5%)

Query: 17  NYTLFNCSSMNTALNXXXXXXXXXXXXXK--VYALNSSLRIKDVTLSYCTKLYDLPSVPS 74
           N T FNCSS+   L                 +Y  + S  + ++ L  CT+++D   +P 
Sbjct: 104 NVTFFNCSSVGQHLRSWEQTKPGAQDMLSCPIYVADLSESVIELDLLRCTRMFD-KVLPI 162

Query: 75  YVFHQQNDLILSWDESCDNQTNH-ECYKILHKSKGPWKKVEXXXXXXXXXXXXXXXXXXY 133
            +  + N L L+W E    QT H +C +   KSK                         +
Sbjct: 163 DLSFRNNYLKLNWSE----QTFHSQCLQPQIKSKHTSIIAATTGAIVGSTILVVLFGVFF 218

Query: 134 RVRYTSQKDKENQARIENFLENYRALKPTR 163
           RV    +   E+Q R+ENFL++Y A KPTR
Sbjct: 219 RVYLYYRMKGEDQTRLENFLKDYEASKPTR 248