Miyakogusa Predicted Gene

Lj0g3v0275179.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0275179.1 Non Characterized Hit- tr|D8S9W1|D8S9W1_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,62.86,3e-19,DDHD,DDHD; SEC23 INTERACTING PROTEIN
P125-RELATED,NULL; SEC-23 INTERACTING PROTEIN P125,NULL;
seg,NU,CUFF.18239.1
         (138 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g033490.1 | shoot gravitropism 2 (SGR2) protein | HC | chr...   187   2e-48

>Medtr4g033490.1 | shoot gravitropism 2 (SGR2) protein | HC |
           chr4:11966630-11953780 | 20130731
          Length = 929

 Score =  187 bits (476), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 85/118 (72%), Positives = 101/118 (85%)

Query: 21  MLERLTGSKTGRIDHMLQDKTFEHSYLQAVGAHTNYWRDHDTALFILRHLYRDIPEEPNL 80
           M+ERLTGSKTGR+DHMLQDKTFEH YLQA+G+HTNYWRD+DTALFIL+HLYRDIPEE N 
Sbjct: 812 MMERLTGSKTGRVDHMLQDKTFEHPYLQALGSHTNYWRDYDTALFILKHLYRDIPEEHNS 871

Query: 81  SAVHSGGSPKYQSSSAGWYDQRDSVEEDLPLTFSDKAMVRNFSSKTRKILHKKTASNF 138
           S V+S GS  ++++S GWYD RD+VEED PLTF+DK   RNFS+K R+ L K TAS+F
Sbjct: 872 STVYSAGSSHHETTSVGWYDPRDTVEEDAPLTFTDKVKARNFSTKARRFLAKNTASDF 929