Miyakogusa Predicted Gene

Lj0g3v0274769.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0274769.1 Non Characterized Hit- tr|I1NAJ0|I1NAJ0_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.1205
PE=,84.02,0,seg,NULL; thrS: threonine--tRNA ligase,Threonine-tRNA
ligase, class IIa; Class II aaRS and biotin
sy,NODE_13865_length_1541_cov_62.122646.path2.1
         (520 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g083180.1 | threonyl-tRNA synthetase/threonine-tRNA ligase...   868   0.0  
Medtr5g034820.1 | threonyl-tRNA synthetase/threonine-tRNA ligase...   315   5e-86
Medtr3g077340.1 | threonyl-tRNA synthetase | HC | chr3:34723849-...    94   3e-19

>Medtr3g083180.1 | threonyl-tRNA synthetase/threonine-tRNA ligase,
           putative | HC | chr3:37534906-37529329 | 20130731
          Length = 652

 Score =  868 bits (2244), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 423/505 (83%), Positives = 445/505 (88%), Gaps = 12/505 (2%)

Query: 22  MATFTVAIPTAFHFTTQT---QAHSPSSIPXXXXXXXXXXXXXXXPPTKCHSTLAAVTAD 78
           MA+    +P A   ++     + H+P S P                 T+  STLA  T+ 
Sbjct: 1   MASTLFTVPMATTLSSSIHFLKLHTPFSFPFRSLHSPTPTFF-----TRKFSTLAVATS- 54

Query: 79  SSQPLAQPNP---DPIVLPTNESSGTLLRIRHTCAHVMAMAVQKLYPHAKVTIGPWIENG 135
            SQP    +    D IVLPTNESS TLLRIRHTCAHVMAMAVQKLYP AKVTIGPWIENG
Sbjct: 55  PSQPATVSDSNRQDRIVLPTNESSNTLLRIRHTCAHVMAMAVQKLYPQAKVTIGPWIENG 114

Query: 136 FYYDFDMEPLTDKDLKRIKKEMDRIISKNLPLVREEVSRDEAHRRIFALNEPYKMEILES 195
           FYYDFDMEPLTDKDLKRIKKEMDRIISKNLPLVREEVSRDEAHRRI ALNEPYKMEILE 
Sbjct: 115 FYYDFDMEPLTDKDLKRIKKEMDRIISKNLPLVREEVSRDEAHRRIVALNEPYKMEILEG 174

Query: 196 IKEEPITIYHIGEEWWDLCAGPHVETTGNINKKAVELESIAGAYWRGDERKPMLQRIYGT 255
           IKEEPITIYHIG EWWDLCAGPHVE+TGNI + AVELESIAGAYWRGDE+KPMLQRIYGT
Sbjct: 175 IKEEPITIYHIGGEWWDLCAGPHVESTGNIKRNAVELESIAGAYWRGDEKKPMLQRIYGT 234

Query: 256 AWENEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDDAGGGLVFWHPKGAIVRHIIEDF 315
           AWE EEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQ+DAGGGLVFWHPKGAIVRHIIEDF
Sbjct: 235 AWETEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQEDAGGGLVFWHPKGAIVRHIIEDF 294

Query: 316 WKKIHIERGYDLLYTPHVAKADLWKISGHLDFYKENMYDQMSIEDELYQLRPMNCPYHIL 375
           WKK+HI+RGYDLLYTPHVAKADLWKISGHLDFYKENMYDQMSIEDE YQLRPMNCPYHIL
Sbjct: 295 WKKVHIDRGYDLLYTPHVAKADLWKISGHLDFYKENMYDQMSIEDERYQLRPMNCPYHIL 354

Query: 376 VYKRKLHSYRDFPIRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLDDQIKDEIRG 435
           VYKRK HSYRDFP+RVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCL+DQIKDEIRG
Sbjct: 355 VYKRKRHSYRDFPVRVAELGTVYRYELSGSLHGLFRVRGFTQDDAHIFCLEDQIKDEIRG 414

Query: 436 VLDLTEQILLQFGFDKYEVNLSTRPEKSVGDDDIWEKATSALKNALDDKGWTYQIDDGGG 495
           VLDLTE+ L QFGFDKYE+NLSTRPEKSVG+DDIWEKATSALK+ALDDKGWTYQIDDGGG
Sbjct: 415 VLDLTEETLSQFGFDKYEINLSTRPEKSVGEDDIWEKATSALKDALDDKGWTYQIDDGGG 474

Query: 496 AFYGPKIDIKIEDALGRKWQCSTIQ 520
           AFYGPKID+KIEDALGRKWQCSTIQ
Sbjct: 475 AFYGPKIDVKIEDALGRKWQCSTIQ 499


>Medtr5g034820.1 | threonyl-tRNA synthetase/threonine-tRNA ligase,
           putative | HC | chr5:15119715-15131595 | 20130731
          Length = 711

 Score =  315 bits (808), Expect = 5e-86,   Method: Compositional matrix adjust.
 Identities = 175/419 (41%), Positives = 264/419 (63%), Gaps = 14/419 (3%)

Query: 107 HTCAHVMAMAVQKLYPHAKVTIGPWIENG--FYYD--FDMEPLTDKDLKRIKKEMDRIIS 162
           H+ AH++  +++  Y   K+ IGP    G  FYYD  +    L D   K+I+    + ++
Sbjct: 149 HSSAHILGQSLETEYG-CKLCIGPCTTRGEGFYYDAFYGDLGLNDDHFKQIEAVALKAVA 207

Query: 163 KNLPLVREEVSRDEAHRRIFALNEPYKMEILESI-KEEPITIYHIGEEWWDLCAGPHVET 221
           +  P  R EV+RD+A   IF+ N+ +K+EI+  +  ++ IT+Y  G    DLC GPH+  
Sbjct: 208 EKQPFERIEVTRDQA-LEIFSDNK-FKVEIINDLPADKTITVYRCGP-LVDLCRGPHIPN 264

Query: 222 TGNINKKAVELESIAGAYWRGDERKPMLQRIYGTAWENEEQLKAYLHFKEEAKRRDHRRL 281
           T  +  KA+     + AYWRGD+ +  LQR+YG ++ + + LK YL   EEAK+ DHR +
Sbjct: 265 TSFV--KAIACLKASSAYWRGDKDRESLQRVYGISYPDNKSLKEYLLRLEEAKKYDHRIV 322

Query: 282 GQDLDLFSIQDDAGGGLVFWHPKGAIVRHIIEDFWKKIHIERGYDLLYTPHVAKADLWKI 341
           G   +L    + + G   F+ P GA + + + +F +  + +RGY  + +P+V   DLW  
Sbjct: 323 GVKQELIYHHEWSPGSW-FFLPHGARIYNKLMNFIRDQYRDRGYQEVISPNVFNMDLWVQ 381

Query: 342 SGHLDFYKENMYDQMSIEDELYQLRPMNCPYHILVYKRKLHSYRDFPIRVAELGTVYRYE 401
           SGH   YKE+M+  + I+ + + L+PMNCP H L++K ++ SYR+ P+R A+ G ++R E
Sbjct: 382 SGHAANYKEDMF-VLEIDKQEFGLKPMNCPGHCLMFKHRVRSYRELPLRFADFGVLHRNE 440

Query: 402 LSGSLHGLFRVRGFTQDDAHIFCLDDQIKDEIRGVLDLTEQILLQFGFDKYEVNLSTRPE 461
            SG+L GL RVR F QDDAHIFC + QIKDE+R  L+  + +   FGF  YE+ LSTRPE
Sbjct: 441 ASGALSGLTRVRRFQQDDAHIFCRESQIKDEVRNALNFIDHVYKIFGFS-YELKLSTRPE 499

Query: 462 KSVGDDDIWEKATSALKNALDDKGWTYQIDDGGGAFYGPKIDIKIEDALGRKWQCSTIQ 520
           K +G+ + WEKA ++LK ALD+ G  +Q+++G GAFYGPKIDI + DAL RK+QC+T+Q
Sbjct: 500 KYLGNIETWEKAEASLKEALDEFGKPWQLNEGDGAFYGPKIDISVSDALRRKFQCATLQ 558


>Medtr3g077340.1 | threonyl-tRNA synthetase | HC |
           chr3:34723849-34727052 | 20130731
          Length = 239

 Score = 94.4 bits (233), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 113/207 (54%), Gaps = 27/207 (13%)

Query: 124 AKVTIGPWI--ENGFYYD--FDMEPLTDKDLKRIKKEMDRIISKNLPLVREEVSRDEAHR 179
            K+ IGP    ENGFYYD  +    L D   K I+    +++ +  P+   EV+RD+A  
Sbjct: 50  CKLCIGPCTTTENGFYYDAIYCNLGLKDYQFKIIESGAFKVVVEKQPI---EVTRDQA-L 105

Query: 180 RIFALNEPYKMEILESIK-EEPITIYHIGEEWWDLCAGPHVETTGNINKKAVELESIAGA 238
            IF+ ++ +K+EI+ ++  +E IT+Y           GP V    ++ +  +E  S   A
Sbjct: 106 EIFS-DDKFKVEIINNLAPDETITVYR---------CGPLV----DLYRACLEASS---A 148

Query: 239 YWRGDERKPMLQRIYGTAWENEEQLKAYLHFKEEAKRRDHRRLGQDLDLFSIQDDAGGGL 298
           YWRG + +  LQ +YG ++ +++ LK YLH  EEAK+ DHR LG   +L S+ + + G  
Sbjct: 149 YWRGGKNRKSLQSVYGISYPDQKSLKEYLHQLEEAKKYDHRILGLKQELVSLHEWSPGSW 208

Query: 299 VFWHPKGAIVRHIIEDFWKKIHIERGY 325
            F  P GA++ + + DF +  +  RGY
Sbjct: 209 FFL-PHGALIYNKLMDFIRNQYRHRGY 234