Miyakogusa Predicted Gene
- Lj0g3v0274209.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0274209.1 Non Characterized Hit- tr|I1JWM8|I1JWM8_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.42552
PE,40,2e-16,mTERF,Mitochodrial transcription termination
factor-related; seg,NULL; SUBFAMILY NOT NAMED,NULL; CGI,CUFF.18162.1
(433 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g061450.1 | transcription termination factor family protei... 612 e-175
Medtr2g060620.1 | transcription termination factor family protei... 184 1e-46
Medtr5g094610.1 | transcription termination factor family protei... 64 2e-10
Medtr2g437080.1 | mTERF protein | LC | chr2:14501679-14504689 | ... 62 1e-09
Medtr5g084810.1 | transcription termination factor family protei... 60 5e-09
Medtr3g092710.1 | plastid transcriptionally active 15 protein | ... 59 1e-08
Medtr4g084630.1 | transcription termination factor family protei... 58 2e-08
Medtr2g437040.1 | mTERF protein | LC | chr2:14484903-14486054 | ... 57 3e-08
Medtr1g115415.1 | transcription termination factor family protei... 56 6e-08
Medtr2g437240.1 | mTERF protein | LC | chr2:14566854-14568476 | ... 54 4e-07
Medtr2g034600.3 | transcription termination factor family protei... 53 5e-07
Medtr2g034600.2 | transcription termination factor family protei... 53 5e-07
Medtr2g034600.1 | transcription termination factor family protei... 53 5e-07
Medtr5g068860.1 | transcription termination factor family protei... 53 6e-07
Medtr7g080620.1 | transcription termination factor family protei... 52 2e-06
Medtr4g119580.1 | mTERF protein | HC | chr4:49563660-49561008 | ... 51 2e-06
Medtr5g041630.1 | transcription termination factor family protei... 49 7e-06
Medtr8g105560.1 | transcription termination factor family protei... 49 7e-06
Medtr6g003960.1 | transcription termination factor family protei... 49 8e-06
>Medtr2g061450.1 | transcription termination factor family protein |
HC | chr2:26047796-26046155 | 20130731
Length = 432
Score = 612 bits (1577), Expect = e-175, Method: Compositional matrix adjust.
Identities = 292/410 (71%), Positives = 345/410 (84%)
Query: 24 QYRKQISVANLFQRYGFPSTQLHSFLSDNRFLLDSHLPDLQKSLDTLFSFRIPQKTLISL 83
YRKQI++ANLF +GFPS+ L FLS N FL +S L++SL TLFSF+IPQK LISL
Sbjct: 23 HYRKQITLANLFLSFGFPSSSLPHFLSKNHFLFNSDPSHLRQSLTTLFSFKIPQKNLISL 82
Query: 84 LRDCPGVLEHRFLHNWKSAFSELNSLVPNSSPLMLANLLQCCTRFQIDPVEFSHRVEVFK 143
+RD P VLE +FLH+W+ F + S + N SPLM+ANLL+C F ++P+E S ++E+F+
Sbjct: 83 VRDFPSVLEPQFLHSWELGFPKFKSKLFNPSPLMIANLLRCSRTFHLNPLEISRKIEIFR 142
Query: 144 GLGFSDAAVARVLEGFTGVIVMSEREIVCVIEFLVDFGVTRDEVDRIVQLNPRVLGFGVE 203
GLGFSD + RVLE F +VM E +IV VI FL++F V +DE+DR+V+L P+VLGF +E
Sbjct: 143 GLGFSDDVLIRVLEEFPSAVVMGETQIVGVINFLMEFRVPKDEIDRVVRLFPKVLGFSIE 202
Query: 204 DRLKPLIEELRGLGFSRREVRKEIVREPRILGMETGEFSRCLKLLESLKCREAIREKILE 263
DRLKPLI ELRGLGFS REVR E+VR+PRILGME GEFSRCLKLL+SLKCREAI+E+I
Sbjct: 203 DRLKPLIHELRGLGFSSREVRAEVVRDPRILGMEIGEFSRCLKLLQSLKCREAIKERIFG 262
Query: 264 EGMLRACFEVKLRVDCLCGHGLIRRDALKVLWKEPRLITYDLDDIVKKIEFLVHRMKYGV 323
EG++RACFEVKLRVDCLCG GLIRRDALKVLWKEPRLI YDL+DI KKIEFL+ RMKYGV
Sbjct: 263 EGLVRACFEVKLRVDCLCGRGLIRRDALKVLWKEPRLIAYDLEDIEKKIEFLIQRMKYGV 322
Query: 324 DCLPDVPEYLGVNFDKQIVPRYNVVEYLRAKGAIGFEVGLKDLIKPTRLRFYNLYVKPYP 383
DCL +VPEYLGVNF+KQIVPRYNV+EYL+ KGAIGFEVGLKD+IKPTRLRFYNLYVKPYP
Sbjct: 323 DCLHEVPEYLGVNFEKQIVPRYNVIEYLKGKGAIGFEVGLKDIIKPTRLRFYNLYVKPYP 382
Query: 384 ECEKIYGRFSRNLEVKSKHPAGLWKIFQPQKFPSTDEDVKNMKSFMDSMV 433
ECEKIYGRFS +EVK KHPAGLWK+FQP KFP T +DVKNMK+FMDSM+
Sbjct: 383 ECEKIYGRFSEKVEVKRKHPAGLWKMFQPPKFPQTSKDVKNMKAFMDSML 432
>Medtr2g060620.1 | transcription termination factor family protein |
HC | chr2:25710080-25709446 | 20130731
Length = 194
Score = 184 bits (468), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 88/126 (69%), Positives = 101/126 (80%)
Query: 303 YDLDDIVKKIEFLVHRMKYGVDCLPDVPEYLGVNFDKQIVPRYNVVEYLRAKGAIGFEVG 362
YDL+D KKIEFL+ RMKYGVDCL +VPEYLGVNF+KQIVPRYNV+EYL+ KGAIGFEVG
Sbjct: 61 YDLEDTEKKIEFLIQRMKYGVDCLHEVPEYLGVNFEKQIVPRYNVIEYLKGKGAIGFEVG 120
Query: 363 LKDLIKPTRLRFYNLYVKPYPECEKIYGRFSRNLEVKSKHPAGLWKIFQPQKFPSTDEDV 422
LKD+IKPTRLRFYNLYVKPYPE +KIYGRFS +EVKSKHPA + + PS
Sbjct: 121 LKDIIKPTRLRFYNLYVKPYPENQKIYGRFSGKVEVKSKHPAWTLEAVPTTEVPSNRSRC 180
Query: 423 KNMKSF 428
+ + F
Sbjct: 181 EEHEGF 186
>Medtr5g094610.1 | transcription termination factor family protein |
HC | chr5:41344877-41348219 | 20130731
Length = 503
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 117/251 (46%), Gaps = 17/251 (6%)
Query: 125 CTRFQIDPVEFSHRVEVFKGLGFSDAAVARVLEGFTGVIVMS-EREIVCVIEFLVDFGVT 183
+ FQI+ R++ LG + R+L ++ + E + + FL+ GV
Sbjct: 216 MSSFQINVCSAQERIDYLMSLGVKHKDIRRILLRQPQILEYTVENNLKTHVAFLMGLGVP 275
Query: 184 RDEVDRIVQLNPRVLGFGVEDRLKP----LIEELRGLGFSRREVRKEIVREPRILGMETG 239
++ +I+ P + + VE LKP LIEE +G +++ K I P+IL ++
Sbjct: 276 STKIGQIIASTPSLFSYSVEKSLKPTVRYLIEE---VGIKEKDLGKVIQLSPQIL-VQRI 331
Query: 240 EFSRCLKLLESLKCREAIREKILE-----EGMLRACFEVKL--RVDCLCGHGLIRRDALK 292
+ S +L+ K +A +E I++ +L + L R++ L G+ D LK
Sbjct: 332 DISWNTRLMFLNKELDAPKESIVKMVTKHPQLLHYSIDDGLLPRINFLRSIGMKNADILK 391
Query: 293 VLWKEPRLITYDLDDIVK-KIEFLVHRMKYGVDCLPDVPEYLGVNFDKQIVPRYNVVEYL 351
+L ++++ L+ +K K +LV+ + V L P YL ++ D++I PR+ + L
Sbjct: 392 ILTSLTQVLSLSLEANLKPKYLYLVNELHNEVQTLTKYPMYLSLSLDQRIRPRHKFLVSL 451
Query: 352 RAKGAIGFEVG 362
+ F +G
Sbjct: 452 KKAPKGPFPLG 462
>Medtr2g437080.1 | mTERF protein | LC | chr2:14501679-14504689 |
20130731
Length = 382
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/253 (18%), Positives = 107/253 (42%), Gaps = 38/253 (15%)
Query: 139 VEVFKGLGFSDAAVARVLEGFTGVIVMS-EREIVCVIEFLVDFGVTRDEVDRIVQLNPRV 197
++ F+ GFS++ + R++ ++ + ++ +F + G + ++ + NPR+
Sbjct: 79 LKFFRNYGFSNSQLRRIIPKAPWLLSCDPSKRVLPKFQFFLSKGASTSDIVNFMSKNPRI 138
Query: 198 LGFGVEDRLKPLIEELRGLGFSRREVRKEIVREPRILG-----------METG------- 239
L +++R+ P+ E + S ++ ++ P + +E G
Sbjct: 139 LSVSLKNRIVPIYELVYRFLQSHKDTIACVISNPVLFSDHLVAHNIALLLENGLSDSNIS 198
Query: 240 ----EFSRCLKLLESLKCREAIRE-------------KILEEGMLRACFEVKLRVDCLCG 282
E R L + LK + +R+ I + +A + K +VD
Sbjct: 199 RLLREHRRTLHTCDILKVVDELRDLGFNPSKTTFGVALIAKSSTTKALW--KEKVDAFKK 256
Query: 283 HGLIRRDALKVLWKEPRLITYDLDDIVKKIEFLVHRMKYGVDCLPDVPEYLGVNFDKQIV 342
G D L+ K+P + +D I + F V+++ + + P+ L ++ +K+I+
Sbjct: 257 WGWSDEDVLEAFKKQPHCMITSIDKINLVMSFWVNQLGWDAKDIAKTPDILSLSLEKRII 316
Query: 343 PRYNVVEYLRAKG 355
PR VV++L + G
Sbjct: 317 PRATVVQFLLSNG 329
>Medtr5g084810.1 | transcription termination factor family protein |
HC | chr5:36606004-36603602 | 20130731
Length = 592
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 71/131 (54%), Gaps = 2/131 (1%)
Query: 272 EVKLRVDCLCGHGLIRRDALKVLWKEPRLITYDLDDIVKKIEFLVHRMKYGVDCLPDVPE 331
+++ R+DCL GL A++++ + P+++ + I KKI+FL + + Y ++CL P
Sbjct: 459 QLQERLDCLVEAGLDCSTAIRMVKRVPKILVLKRNVIQKKIDFLKNTLGYPIECLVRYPT 518
Query: 332 YLGVNFDKQIVPRYNVVEYLRAKGAIGFEVGLKDLIKPTRLRFYNLYVKPYPECEKIYGR 391
Y + D+ + R ++ E+L+ + A+ + L ++ RF ++V +PE I+ R
Sbjct: 519 YFLQDVDR-MSARVSMYEWLKERNAVSHALSLSTIVSYDEKRFVQVFVNMHPEGPTIWQR 577
Query: 392 FSRNLEVKSKH 402
+ L K K+
Sbjct: 578 I-KTLSNKDKN 587
>Medtr3g092710.1 | plastid transcriptionally active 15 protein | HC
| chr3:42360298-42362077 | 20130731
Length = 506
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 104/240 (43%), Gaps = 12/240 (5%)
Query: 121 LLQCCTRFQIDPVEFSHRVEVFKGL-GFSDAAVARVLEGFTGVIVMSEREIVCVIEFLVD 179
+L C Q+ P R+ V L G + ++ +VL F ++ S + I+FL
Sbjct: 243 ILNCDLHNQLIP-----RIRVLTALSGGDEDSIGKVLNRFPIILNYSVEHLEEHIKFLRC 297
Query: 180 FGVTRDE-VDRIVQLNPRVLGFGVEDRLKPLIEELRGLGFSRREVRKEIVREPRILGMET 238
F D+ + +IV + P + E +L+P I+ L+ G E+ K + + L + +
Sbjct: 298 FADLDDQQIFKIVLVFPAIFTSSRERKLRPRIQFLKECGLDADEIFKLLTKAALFLSI-S 356
Query: 239 GEFSRCLKLLESLKCREAIREKILEEGMLRA----CFEVKLRVDCLCGHGLIRRDALKVL 294
+ KL +K R K L + + C ++ V +G D +
Sbjct: 357 FRSNLAYKLGVLVKIGYKYRTKELAVAIAASTRISCENMQKMVSLFLNYGFSLEDIFAMS 416
Query: 295 WKEPRLITYDLDDIVKKIEFLVHRMKYGVDCLPDVPEYLGVNFDKQIVPRYNVVEYLRAK 354
K P+++ Y + KK+++++ M + L D P YLG D +I RY + + LR +
Sbjct: 417 KKHPQILQYHHASLEKKMDYMIEEMNRDIQELLDFPAYLGYKLDDRIKHRYEIKKDLRGE 476
>Medtr4g084630.1 | transcription termination factor family protein |
HC | chr4:32962573-32960937 | 20130731
Length = 332
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/323 (20%), Positives = 136/323 (42%), Gaps = 44/323 (13%)
Query: 35 FQRYGFPSTQLHSFLSDNRFLLDSHLPDLQKSLDTLFSFRIPQKTLISLLRDCPGVLEHR 94
F+ GF T + + + L +H ++ D L + I ++ L S++ CP +L
Sbjct: 13 FKHRGFDDTIIQKMFTKCKRLETAHRERADENWDYLKTIGIQERKLPSIVSKCPKILVLG 72
Query: 95 FLHNWKSAFSELNSLVPN-----SSPLMLANLLQCCTRFQIDPVEFSHRVEVFKGLGFSD 149
LN+L S+ +L C ++ P+ + F+ LG +
Sbjct: 73 LNEKIVPMVECLNTLATKPHEVASAIAKFPQILSCSVEEKLCPL-----LAFFQTLGVPE 127
Query: 150 AAVARVLEGFTGVIVMS-EREIVCVIEFLVDFGVTRDE-VDRIVQLNPRVLGFGVEDRLK 207
+ ++L +I S E ++ +++FL G+ ++ + +I+ +P ++G+ V+ RL+
Sbjct: 128 KHIGKILLLNPRLISYSIETKMTEIVKFLASVGLDKNGMIGKIMVKDPYIMGYSVDKRLR 187
Query: 208 PLIEELRGLGFSRREVRKEIVREPRILGMETGEFSRCLKLLESLKCREAIREKILEEGML 267
P E L+ +G + +++ + P IL R+ + + L
Sbjct: 188 PTSEFLKSIGLTEHDLQVLALNFPSILS------------------RDVDKVLVHNYDFL 229
Query: 268 RAC-FEVKLRVDCLCGHGLIRRDALKVLWKEPRLITYDLDDIVKKIEFLVHRMKYGVDCL 326
+ C F+ + VD + G+ P LI + + +I+FLV M VD +
Sbjct: 230 KNCGFQGRQIVDLVVGY-------------PPILIKSVRNSLEPRIKFLVDVMGREVDEI 276
Query: 327 PDVPEYLGVNFDKQIVPRYNVVE 349
D P + K++V R+ +++
Sbjct: 277 IDYPCFFRHGLKKKLVSRHKLLK 299
>Medtr2g437040.1 | mTERF protein | LC | chr2:14484903-14486054 |
20130731
Length = 383
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/280 (18%), Positives = 107/280 (38%), Gaps = 34/280 (12%)
Query: 139 VEVFKGLGFSDAAVARVLEGFTGVIVMSE-REIVCVIEFLVDFGVTRDEVDRIVQLNPRV 197
+ F+ GFSD+ + V+ ++ + ++ +F + G + ++ IV NP
Sbjct: 79 LNFFRNHGFSDSQIRTVIAKEPRLLSCDPLKRVLPKFQFFLSKGASNSDIVNIVSKNPMF 138
Query: 198 LGFGVEDRLKPLIEELRGLGFSRREVRKEIVREPRILGMETGEFS--------------- 242
L ++ ++ P E + S + + + P G + E +
Sbjct: 139 LTASLDKKIVPTYELVYKYLQSDKHILALLNCNPTFFGRSSVEHNIRLLIQSGVTDINIA 198
Query: 243 ----RCLKLLESLKCREAIRE----------KILEEGMLRACFEVKLR----VDCLCGHG 284
+K + E ++E I ++ + K R VD G
Sbjct: 199 RLLRNNIKFFMTGNLPELVKELKDLGFHPSQSIFSVALIAKTYLSKSRWNEKVDVFKKWG 258
Query: 285 LIRRDALKVLWKEPRLITYDLDDIVKKIEFLVHRMKYGVDCLPDVPEYLGVNFDKQIVPR 344
D + K+P+ + +D I + F V+++ + + P LG + +++I+PR
Sbjct: 259 WSDEDVREAFKKQPQCMLTSIDKINSVMNFWVNQLGWDALAIAKTPRVLGASLERRIIPR 318
Query: 345 YNVVEYLRAKGAIGFEVGLKDLIKPTRLRFYNLYVKPYPE 384
+VVEYL +G E L FY++Y+ + E
Sbjct: 319 ASVVEYLLKRGLHKKEASLTSPFIVIDKTFYDMYINRFKE 358
>Medtr1g115415.1 | transcription termination factor family protein |
HC | chr1:52109146-52107512 | 20130731
Length = 501
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 91/200 (45%), Gaps = 15/200 (7%)
Query: 112 NSSPLMLANLLQCCTRFQIDPVEFSHRVEVFKGLGFSDAAVARVLEGFTGVIVMSE-REI 170
N PL+L C R + PV + + +G S + + ++ + V+ S E+
Sbjct: 125 NQYPLILG----CSVRKNMIPV-----LGYLEKIGISRSKLGEFIKNYPQVLHASVIVEL 175
Query: 171 VCVIEFLVDFGVTRDEVDRIVQLNPRVLGFGVEDRLKPLIEELRGLGFSRREVRKEIVRE 230
VI+FL V +D++ ++Q P +LGF +E + + L +G + R++ + +
Sbjct: 176 APVIKFLRGLDVEKDDIGFVLQKYPELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVTQY 235
Query: 231 PRILGMETGEFSRCL-KLLESLKCREAIREKILEEGMLRACFE----VKLRVDCLCGHGL 285
P LGM G + L L +L + I ++LE+ ++ VK VDCL GL
Sbjct: 236 PYFLGMRVGTMIKPLVDYLVNLGLPKRILARMLEKRAYLLGYDLEETVKPNVDCLISFGL 295
Query: 286 IRRDALKVLWKEPRLITYDL 305
+ V+ + P +I L
Sbjct: 296 RKEYLPSVIAQYPLIIGLPL 315
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 90/189 (47%), Gaps = 10/189 (5%)
Query: 173 VIEFLVDFGVTRDEVDRIVQLNPRVLGFGVEDRLKPLIEELRGLGFSRREVRKEIVREPR 232
++++LV+ G+ + + R+++ +LG+ +E+ +KP ++ L G + + I + P
Sbjct: 250 LVDYLVNLGLPKRILARMLEKRAYLLGYDLEETVKPNVDCLISFGLRKEYLPSVIAQYPL 309
Query: 233 ILG------METGEFSRCLKLLESLKCREAIREKILEEGMLRACFEVKLRVDCLCGHGLI 286
I+G + + ++ LKL + + EK+ + L +K V+ L G +
Sbjct: 310 IIGLPLKAKLSSQQYFFSLKLKIDPEGFARVVEKMPQVVSLHQNVIMK-PVEFLLGRAIP 368
Query: 287 RRDALKVLWKEPRLITYDLDDIVKKIEFLVHRMKYGVDCLPDVPEYLGVNFDKQIVPRYN 346
+D ++ K P+L+ ++ + F M V L + PEY + + +I PRY
Sbjct: 369 SQDVASMVIKCPQLVALRVELMKNSYYFFKSEMGRPVKELVEFPEYFTYSLESRIKPRY- 427
Query: 347 VVEYLRAKG 355
+ L+ KG
Sbjct: 428 --QRLKTKG 434
>Medtr2g437240.1 | mTERF protein | LC | chr2:14566854-14568476 |
20130731
Length = 417
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 79/339 (23%), Positives = 147/339 (43%), Gaps = 61/339 (17%)
Query: 30 SVANLFQRYGFPSTQLHSFLSDNRFLL--DSH---LPDLQKSL-------DTLFSFRIPQ 77
SV N F+ YGF + +H+ + +LL D+H LP Q L D + +
Sbjct: 67 SVLNFFKNYGFNDSDIHNIIKREPWLLSCDTHKTILPKFQFLLAKGASQSDIVRMVVVNP 126
Query: 78 KTLISLLRDCPGVLEHRFLHNWKSAFSELNSLVPNSSPLMLANLLQCCTRFQIDPVEFSH 137
K + S L++ ++ H FL S+ SE+ SL+ S+P++L L+ +I P+
Sbjct: 127 KFVKSSLKNHE-IMFHFFLSKGASS-SEIVSLL-TSNPIILHISLEK----RIIPL---- 175
Query: 138 RVEVF-KGLGFSDAAVARVLEGFTGVIVMSEREIVCVIEFLVDFGVTRDEVDRIVQLNPR 196
E+ K L + + ++ T + S I+ + + DFGV+ + + ++Q P
Sbjct: 176 -FELLSKFLKTNKDIIICLIRHSTAFSMNSYHLIMDNVNLMSDFGVSDNVIASLLQSRPS 234
Query: 197 VLGFGVEDRLKPLIEELRGLGFSRREVRKEIVREPRILGMETGEFSRCLKLLESLKCREA 256
++G L +EE++ LGF +P T F +L ++
Sbjct: 235 IVG---SKELIKSLEEVKSLGF-----------DP-----STASFGV------ALAAKKC 269
Query: 257 IREKILEEGMLRACFEVKLRVDCLCGHGLIRRDALKVLWKEPRLITYDLDDIVKKIEFLV 316
+R+K +E +VD G ++ +P L+ + I + F V
Sbjct: 270 MRKKRWDE-----------KVDAFKKWGWSDEAVIQAFRLQPNLMLVSIHKIDSLMSFWV 318
Query: 317 HRMKYGVDCLPDVPEYLGVNFDKQIVPRYNVVEYLRAKG 355
+++ + L +P ++ +K+I+PR VV++L KG
Sbjct: 319 NQLGWNSLALTKLPNVFCLSLEKRIIPRALVVQFLLMKG 357
>Medtr2g034600.3 | transcription termination factor family protein |
HC | chr2:13233799-13236843 | 20130731
Length = 496
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 98/240 (40%), Gaps = 43/240 (17%)
Query: 130 IDPVEFSHR--VEVFKGLGFSDAAVARVLEGFTGVIVMS-EREIVCVIEFLVDFGVTRDE 186
IDP E + R + LG + V ++ F S E +I V+EF ++ GV +++
Sbjct: 204 IDPAEGNLRPHIAYLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEK 263
Query: 187 VDRIVQLNPRVLGFGVEDRLKPLIEELRGLGFSRREVRKEIVREPRILGMETGEFSRCLK 246
+ I+ P++ G + LKP ++ LG + + K I R P +L T + + L
Sbjct: 264 IIIILTKRPQLCGISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQKINESL- 322
Query: 247 LLESLKCREAIREKILEEGMLRACFEVKLRVDCLCGHGLIRRDALKVLWKEPRLITYDLD 306
D L G+ + K+L + P +++Y ++
Sbjct: 323 -------------------------------DFLREFGVSEENIGKILTRCPTIVSYSVE 351
Query: 307 DIVKKIEFLVHRMKYGVDC---LPDVPEYLGVNFDKQIVPRYNVVEYLRAKGAIGFEVGL 363
D ++ + GVD L + P+ G++ + I P V ++ +G E+G+
Sbjct: 352 DNLRPTAMYFRSL--GVDVGLLLFNCPQNFGLSIEANIKP---VTQFFLERGYTMEEIGI 406
>Medtr2g034600.2 | transcription termination factor family protein |
HC | chr2:13233091-13236856 | 20130731
Length = 561
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 98/240 (40%), Gaps = 43/240 (17%)
Query: 130 IDPVEFSHR--VEVFKGLGFSDAAVARVLEGFTGVIVMS-EREIVCVIEFLVDFGVTRDE 186
IDP E + R + LG + V ++ F S E +I V+EF ++ GV +++
Sbjct: 269 IDPAEGNLRPHIAYLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEK 328
Query: 187 VDRIVQLNPRVLGFGVEDRLKPLIEELRGLGFSRREVRKEIVREPRILGMETGEFSRCLK 246
+ I+ P++ G + LKP ++ LG + + K I R P +L T + + L
Sbjct: 329 IIIILTKRPQLCGISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQKINESL- 387
Query: 247 LLESLKCREAIREKILEEGMLRACFEVKLRVDCLCGHGLIRRDALKVLWKEPRLITYDLD 306
D L G+ + K+L + P +++Y ++
Sbjct: 388 -------------------------------DFLREFGVSEENIGKILTRCPTIVSYSVE 416
Query: 307 DIVKKIEFLVHRMKYGVDC---LPDVPEYLGVNFDKQIVPRYNVVEYLRAKGAIGFEVGL 363
D ++ + GVD L + P+ G++ + I P V ++ +G E+G+
Sbjct: 417 DNLRPTAMYFRSL--GVDVGLLLFNCPQNFGLSIEANIKP---VTQFFLERGYTMEEIGI 471
>Medtr2g034600.1 | transcription termination factor family protein |
HC | chr2:13233091-13236843 | 20130731
Length = 557
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/240 (21%), Positives = 98/240 (40%), Gaps = 43/240 (17%)
Query: 130 IDPVEFSHR--VEVFKGLGFSDAAVARVLEGFTGVIVMS-EREIVCVIEFLVDFGVTRDE 186
IDP E + R + LG + V ++ F S E +I V+EF ++ GV +++
Sbjct: 265 IDPAEGNLRPHIAYLMELGMNTDQVRSIMRRFPAFAYYSLEGKIKPVVEFFLELGVPKEK 324
Query: 187 VDRIVQLNPRVLGFGVEDRLKPLIEELRGLGFSRREVRKEIVREPRILGMETGEFSRCLK 246
+ I+ P++ G + LKP ++ LG + + K I R P +L T + + L
Sbjct: 325 IIIILTKRPQLCGISLSKNLKPTMKFFESLGVDKEQWAKVIYRFPALLTYSTQKINESL- 383
Query: 247 LLESLKCREAIREKILEEGMLRACFEVKLRVDCLCGHGLIRRDALKVLWKEPRLITYDLD 306
D L G+ + K+L + P +++Y ++
Sbjct: 384 -------------------------------DFLREFGVSEENIGKILTRCPTIVSYSVE 412
Query: 307 DIVKKIEFLVHRMKYGVDC---LPDVPEYLGVNFDKQIVPRYNVVEYLRAKGAIGFEVGL 363
D ++ + GVD L + P+ G++ + I P V ++ +G E+G+
Sbjct: 413 DNLRPTAMYFRSL--GVDVGLLLFNCPQNFGLSIEANIKP---VTQFFLERGYTMEEIGI 467
>Medtr5g068860.1 | transcription termination factor family protein |
HC | chr5:29165945-29163659 | 20130731
Length = 530
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 65/308 (21%), Positives = 131/308 (42%), Gaps = 12/308 (3%)
Query: 67 LDTLFSFRIPQKTLISLLRDCPGVLEHRFLHNWKSAFSELNSL--VPNSSPLMLANLLQC 124
LD L + + T+ LR P VL + + L + P+ P +L +
Sbjct: 175 LDYLGKLGVRKSTITQFLRTYPQVLHASVVVDLVPVVKYLQGMDIKPDDIPRVLERYPEV 234
Query: 125 CTRFQIDPVEFSHRVEVFKGLGFSDAAVARVLEGFTGVIVMS-EREIVCVIEFLVDFGVT 183
F+++ S V G+G + +L F ++ M R I +E+L G+
Sbjct: 235 LG-FKLEGT-MSTSVAYLIGIGVGRRELGGILTRFPEILGMRVGRVIKPFVEYLESLGIP 292
Query: 184 RDEVDRIVQLNPRVLGFGVEDRLKPLIEELRGLGFSRREVRKEIVREPRILGME-TGEFS 242
R + R+++ P +LGF +++++KP ++ L + I + P I+G + + +
Sbjct: 293 RLAIARLIETQPYILGFDLDEKVKPNVKSLEEFNVRETSLASIIAQYPDIIGTDLEPKLA 352
Query: 243 RCLKLLESLKCREA-----IREKILEEGMLRACFEVKLRVDCLCGHGLIRRDALKVLWKE 297
+L S+ +A I EK+ + L + +K VD L G K++
Sbjct: 353 DKRSVLNSVLDLDAEDFGLIIEKMPQVVSLSSTPMLK-HVDFLKDCGFSVDQMRKMIVGC 411
Query: 298 PRLITYDLDDIVKKIEFLVHRMKYGVDCLPDVPEYLGVNFDKQIVPRYNVVEYLRAKGAI 357
P+L+ ++D + ++ M+ ++ L + P + + I PR+N+V K ++
Sbjct: 412 PQLLALNIDIMKLSFDYFQSEMERPLEDLVEFPAFFTYGLESTIKPRHNMVTKKGLKCSL 471
Query: 358 GFEVGLKD 365
+ + D
Sbjct: 472 AWMLNCSD 479
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/259 (20%), Positives = 105/259 (40%), Gaps = 50/259 (19%)
Query: 95 FLHNWKSAFSELNSLVPNSSPLMLANLLQCCTRFQIDPVEFSHRVEVFKGLGFSDAAVAR 154
FLH+ ++N+ PL+L C + + PV ++ LG + + +
Sbjct: 145 FLHSLGLTIEDINNY-----PLVLG----CSVKKNMVPV-----LDYLGKLGVRKSTITQ 190
Query: 155 VLEGFTGVIVMSEREIVCVI-EFLVDFGVTRDEVDRIVQLNPRVLGFGVEDRLKPLIEEL 213
L + V+ S + + ++L + D++ R+++ P VLGF +E + + L
Sbjct: 191 FLRTYPQVLHASVVVDLVPVVKYLQGMDIKPDDIPRVLERYPEVLGFKLEGTMSTSVAYL 250
Query: 214 RGLGFSRREVRKEIVREPRILGMETGEFSRCLKLLESLKCREAIREKILEEGMLRACFEV 273
G+G RRE+ + R P ILGM G +
Sbjct: 251 IGIGVGRRELGGILTRFPEILGMRVGRV-------------------------------I 279
Query: 274 KLRVDCLCGHGLIRRDALKVLWKEPRLITYDLDDI----VKKIEFLVHRMKYGVDCLPDV 329
K V+ L G+ R +++ +P ++ +DLD+ VK +E R +
Sbjct: 280 KPFVEYLESLGIPRLAIARLIETQPYILGFDLDEKVKPNVKSLEEFNVRETSLASIIAQY 339
Query: 330 PEYLGVNFDKQIVPRYNVV 348
P+ +G + + ++ + +V+
Sbjct: 340 PDIIGTDLEPKLADKRSVL 358
>Medtr7g080620.1 | transcription termination factor family protein |
HC | chr7:30698662-30694614 | 20130731
Length = 737
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/283 (21%), Positives = 116/283 (40%), Gaps = 31/283 (10%)
Query: 134 EFSHRVEVFKGLGFSDAAVARVLEGFTGVIVMS-EREIVCVIEFLVDFGVTRDEVDRIVQ 192
E HRVE G VA ++ V+ + E+ ++ V+E L FG++ +++ +++
Sbjct: 294 EIVHRVEYLCRFGGKKEEVALLILQCPEVLKLDLEKTVINVLELLKHFGMSSKDLEDVIE 353
Query: 193 LNPRVLG-------------FGVE----DRLKPLIEELRG--LGFSRREVRKEIVREPRI 233
VLG G++ D+LK +L + R E R ++ ++
Sbjct: 354 NFGHVLGTIRMVNLPNVMRAMGLQEWFCDKLKGGHHQLLADYIASDRNEDRDKVYQD--- 410
Query: 234 LGMETGEFSRC-------LKLLESLKCREAIREKILEEGMLRACFEVKLRVDCLCGHGLI 286
G+ SR L L L E L + + E++ R DCL +
Sbjct: 411 -GLRRIHISRARVHSINKLNFLHRLGFGENALTMNLLDCLHGTSSELQERFDCLLRSRIE 469
Query: 287 RRDALKVLWKEPRLITYDLDDIVKKIEFLVHRMKYGVDCLPDVPEYLGVNFDKQIVPRYN 346
++ K PR++ + + I +K+ F +M +D L P L + D +I+PRY
Sbjct: 470 FSKLCMMVRKTPRILNQNYEIIEQKVIFFNQKMGTTLDYLETFPAMLHYHLDDRIIPRYR 529
Query: 347 VVEYLRAKGAIGFEVGLKDLIKPTRLRFYNLYVKPYPECEKIY 389
+L +G + ++ +I + +F K +P K +
Sbjct: 530 FHTWLTERGLSYRKYSVQSMITDSEKKFVARVFKIHPAAPKHW 572
>Medtr4g119580.1 | mTERF protein | HC | chr4:49563660-49561008 |
20130731
Length = 377
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 88/211 (41%), Gaps = 36/211 (17%)
Query: 174 IEFLVDFGVTRDEVDRIVQLNPRVLGFGVEDRLKPLIEELRGLGFSRREVRKEIVREPRI 233
++FL+D GVTR + R++ P V+ V L+ +EE++ LGF
Sbjct: 186 LKFLLDTGVTRSSIYRLLTSRPSVIFSSV---LRTAVEEIKELGF--------------- 227
Query: 234 LGMETGEFSRCLKLLESLKCREAIREKILEEGMLRACFEVKLRVDCLCGHGLIRRDALKV 293
++ C+ LL ++AI + + +VD L G L
Sbjct: 228 ---HPSSYNFCVALL----AKKAITKSQWDS-----------KVDALKSWGYSEDAILTA 269
Query: 294 LWKEPRLITYDLDDIVKKIEFLVHRMKYGVDCLPDVPEYLGVNFDKQIVPRYNVVEYLRA 353
+ P L+ LD + + F + ++ + L PE G++ +K++ PR +V+ YL +
Sbjct: 270 FKRGPNLMLRSLDKLNAVMRFWIQQLGWDPLLLLAAPELFGLSIEKRLSPRASVIRYLLS 329
Query: 354 KGAIGFEVGLKDLIKPTRLRFYNLYVKPYPE 384
KG + + L T F YV + E
Sbjct: 330 KGLMKKDASLTAPFYLTDEVFLQRYVNRFEE 360
>Medtr5g041630.1 | transcription termination factor family protein |
HC | chr5:18278077-18276642 | 20130731
Length = 308
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 100/227 (44%), Gaps = 23/227 (10%)
Query: 168 REIVCVIEFLVDFGVTRDEVDRIVQLNPRVLGFGVEDRLKPLIE-ELRGLGFSRREVRKE 226
R + V + L G+ R ++ RI+ + P +L + PL++ L + +V K
Sbjct: 87 RTLKSVEQCLSSIGIHRSQMGRILDMLPELLTCEPYSDIYPLLDFLLNEVEIPYHDVHKS 146
Query: 227 IVREPRILGMETGE-------FSRCLKLL--ESLKCREAIREKILEEGMLRACFEVKL-- 275
I+R PR+L F R L + SL C+ + +L + E L
Sbjct: 147 ILRCPRLLVSSVENRLRPALCFLRELGFVGPHSLTCQTTL--------LLVSSVEDTLLP 198
Query: 276 RVDCLCGHGLIRRDALKVLWKEPRLITYDLD-DIVKKIEFLVHRMKYGVDCLPDVPEYLG 334
+V+ L G G R + ++ + P L+T+ +D ++ K EF + M V L P+Y
Sbjct: 199 KVEFLMGLGFTRVEVSNMVVRSPGLLTFSVDKNLAPKFEFFLKEMNGDVAELKRFPQYFS 258
Query: 335 VNFDKQIVPRYNVVEYLRAKGAIG--FEVGLKDLIKPTRLRFYNLYV 379
+ + +I PR+ ++ L ++ ++ DLI+ LR L V
Sbjct: 259 FSLEGRIKPRHAMLVRLGLSLSLQEMLQISDGDLIRLLELRLKGLEV 305
>Medtr8g105560.1 | transcription termination factor family protein |
HC | chr8:44520352-44517998 | 20130731
Length = 560
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 82/172 (47%), Gaps = 7/172 (4%)
Query: 137 HRVEVFKGLGFS--DAAVARVLEGFTGVIVMSEREIVCVIEFLVDFGVTRDEVDRIVQLN 194
RVE + LG + D ++ G + + E+ VI+FL V +D++ ++Q
Sbjct: 87 ERVEFIQKLGLTIDDINQYPLILGCSVLHASVIVELAPVIKFLRGLDVEKDDIGFVLQKY 146
Query: 195 PRVLGFGVEDRLKPLIEELRGLGFSRREVRKEIVREPRILGMETGEFSR-CLKLLESLKC 253
P +LGF +E + + L +G + R++ + + P LGM G + + L +L
Sbjct: 147 PELLGFKLEGTMSTSVAYLVSIGVNPRDIGPMVAQYPYFLGMRVGTMIKPFVDYLVNLGL 206
Query: 254 REAIREKILEE--GMLRACFE--VKLRVDCLCGHGLIRRDALKVLWKEPRLI 301
+ I ++LE+ +L E +K VDCL GL + V+ + P++I
Sbjct: 207 PKKILARMLEKRAYLLGYVLEETMKPNVDCLISFGLRKECLPSVIAQYPQII 258
>Medtr6g003960.1 | transcription termination factor family protein |
HC | chr6:35948-29152 | 20130731
Length = 609
Score = 49.3 bits (116), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 73/326 (22%), Positives = 148/326 (45%), Gaps = 24/326 (7%)
Query: 53 RFLLDSHLPDLQKSLDTLFSFRIPQKTLISLLRDCPGVL--EHRFLHNWKSAFSELNSLV 110
R LL S + +LD L + IP + +++ P +L L A ++++ +
Sbjct: 268 RILLLSLNNHISPTLDILQNIGIPADRIPNIILAFPPILLWNVELLQTRVLALNQIDGVD 327
Query: 111 PNSSPLMLANLLQCCTRFQIDPVE---FSHRVEVFKGLGFSDAAVARVLEGFTGVIVMSE 167
+ + LML T Q + E F H V+V K ++D A+ R + ++ S
Sbjct: 328 KDYAKLMLKYPWVLSTSIQENYKEVLAFLHSVKVPKT--WTDRAIKRQPQ----LLGCST 381
Query: 168 REIVCVIEFLVDFGVTRDEVDRIVQLNPRVLGFGVEDRLKPLIEELRGLGFSRREVRKEI 227
++ +++ + GV R ++ +++ +P++L ED L+ ++ +GF + + + +
Sbjct: 382 SKLKLMVDQFAELGVQRKKLYQVITRSPQLLLQKPEDFLQ-VVMFFENMGFDKENIGRIL 440
Query: 228 VREPRILGMETGE-FSRCLKLLESLKCREAIREKILEE--GMLRACFEVKL--RVDCLCG 282
R P I + ++ L ++ +A ++ + +L + L R+
Sbjct: 441 ARCPEIFATSISKTLQSKIEFLSRIEVSKAYIPLVIRKYPELLVSDINKTLPQRIVYFMK 500
Query: 283 HGLIRRDALKVLWKEPRLITYDLDDI-VKKIEFLVHRMKYGVDCLPDVPEYLGVNFDKQI 341
GL ++ ++ K L+ Y + ++ + K+EFLV+ MK V + P Y + +K+I
Sbjct: 501 VGLSEKEIALMVRKFSPLLGYSIKEVLMPKLEFLVNSMKRPVRDVVRYPRYFSYSLEKKI 560
Query: 342 VPRYNVVEYLRAKGAIGFEVGLKDLI 367
PRY V+ KG E LKD++
Sbjct: 561 KPRYRVL-----KGR-NIECSLKDML 580