Miyakogusa Predicted Gene
- Lj0g3v0274039.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0274039.1 Non Characterized Hit- tr|A5BYQ2|A5BYQ2_VITVI
Putative uncharacterized protein OS=Vitis vinifera GN=,65.79,8e-18,ARM
repeat,Armadillo-type fold; ARM_REPEAT,Armadillo; Arm,Armadillo;
Proteasom_PSMB,26S proteasome n,CUFF.18149.1
(542 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g031750.1 | armadillo/beta-catenin-like repeat protein, pu... 683 0.0
Medtr1g031750.2 | armadillo/beta-catenin-like repeat protein, pu... 681 0.0
Medtr1g031750.3 | armadillo/beta-catenin-like repeat protein, pu... 678 0.0
Medtr3g466220.2 | ARM repeat RING/U-box protein | HC | chr3:2722... 60 4e-09
Medtr3g466220.3 | ARM repeat RING/U-box protein | HC | chr3:2722... 60 4e-09
Medtr3g466220.1 | ARM repeat RING/U-box protein | HC | chr3:2722... 60 4e-09
Medtr3g466220.4 | ARM repeat RING/U-box protein | HC | chr3:2722... 60 5e-09
Medtr2g018010.1 | plant U-box protein | HC | chr2:5283903-528693... 51 3e-06
Medtr6g004790.1 | armadillo/beta-catenin-like repeat protein | H... 50 5e-06
>Medtr1g031750.1 | armadillo/beta-catenin-like repeat protein,
putative | HC | chr1:11138276-11131990 | 20130731
Length = 826
Score = 683 bits (1762), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/473 (73%), Positives = 402/473 (84%), Gaps = 6/473 (1%)
Query: 55 NGRGDGGAVDANSLPGIDAVESESSGR-SDGYVALFVRMLGLDHDFLDREQAIVALWKYS 113
NG D A+ P ID VESESS D YVALFVRMLGLDHD LDREQAI+ LW+YS
Sbjct: 64 NGHSDHSTAPAS--PEIDEVESESSSDFGDSYVALFVRMLGLDHDPLDREQAIITLWQYS 121
Query: 114 LGGKKCVDSIMQFPGCINLVVNLLRXXXXXXXXXXXGLLRSLSSVNLYRNSVADSGAIEE 173
LGGKK +D+IMQFPGCINLVVNLLR GLL+SLSS++ YRNSVADSGAIEE
Sbjct: 122 LGGKKYIDNIMQFPGCINLVVNLLRAESSSACEAAAGLLQSLSSIDQYRNSVADSGAIEE 181
Query: 174 ISRLLRQSSLAPEVKEQSLSTLWNLSVDEKLCIKIAESDILLLAIKYLDDEDIKVKEAAG 233
I+RLL QSSLA EVK QSL+ LWNLSVDEKL +KIA+SD+LLLA+KYLDDED+KVKEAAG
Sbjct: 182 INRLLTQSSLASEVKVQSLNMLWNLSVDEKLRVKIAKSDLLLLAMKYLDDEDMKVKEAAG 241
Query: 234 GILANLALSRANHNIMVEAGVIPKLAKFLMPNSEGSKVIRKEARNALLELVKDEYYKILV 293
GILANLALS NH++MVEAGVIPKLAKFL SE S+VIRKEARNALLELVKD+YY+ILV
Sbjct: 242 GILANLALSHVNHDMMVEAGVIPKLAKFLPYESEVSRVIRKEARNALLELVKDDYYRILV 301
Query: 294 IEEGLVPVPLVGAAAYKSFTPGLHLWPTLPDGSEIERTSRQPSRFGASDLLLGLNIDDKD 353
IEEGLVPVPL+GAAAYKS+ P + P PDG+EIERT +PSRFGA++LL+GLN+D+ +
Sbjct: 302 IEEGLVPVPLIGAAAYKSYNPRSYEAPAFPDGTEIERTYDKPSRFGAAELLIGLNVDN-N 360
Query: 354 PNIEEAKINAIVGRTQQRFLARIGAIEMEEKTIPQTECSNDQ-RVTLLPWVDGVARLVLI 412
N++EAK+NAI+G+TQQ+FL R+GAIEMEE T ++ECS+DQ R+TLL W+DGVARLVLI
Sbjct: 361 ANVDEAKVNAIIGQTQQQFLVRVGAIEMEE-TSTRSECSDDQPRLTLLHWIDGVARLVLI 419
Query: 413 LELEDKSAILRAAESIANACINEHMRIAFKEAGAIKHLIRLLTCDDNTVQLAATQALEKL 472
LELEDKSAI+RAAESIA+ACINEHMRIAFKEAGA++HL+RLL+ +DN VQLAATQALEKL
Sbjct: 420 LELEDKSAIVRAAESIASACINEHMRIAFKEAGAVRHLVRLLSWNDNAVQLAATQALEKL 479
Query: 473 SASQGVCRVIEAEGVLGPLVSILKSSGIAGTIVEKSLDILARIFDPSKEMQLK 525
SAS VCRVIE EG L PLVSILK S +AG I EKSL++LA+I DP+KEMQLK
Sbjct: 480 SASNVVCRVIETEGGLAPLVSILKCSDVAGAIAEKSLNVLAQILDPNKEMQLK 532
>Medtr1g031750.2 | armadillo/beta-catenin-like repeat protein,
putative | HC | chr1:11138398-11131640 | 20130731
Length = 633
Score = 681 bits (1756), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/473 (73%), Positives = 402/473 (84%), Gaps = 6/473 (1%)
Query: 55 NGRGDGGAVDANSLPGIDAVESESSGR-SDGYVALFVRMLGLDHDFLDREQAIVALWKYS 113
NG D A+ P ID VESESS D YVALFVRMLGLDHD LDREQAI+ LW+YS
Sbjct: 64 NGHSDHSTAPAS--PEIDEVESESSSDFGDSYVALFVRMLGLDHDPLDREQAIITLWQYS 121
Query: 114 LGGKKCVDSIMQFPGCINLVVNLLRXXXXXXXXXXXGLLRSLSSVNLYRNSVADSGAIEE 173
LGGKK +D+IMQFPGCINLVVNLLR GLL+SLSS++ YRNSVADSGAIEE
Sbjct: 122 LGGKKYIDNIMQFPGCINLVVNLLRAESSSACEAAAGLLQSLSSIDQYRNSVADSGAIEE 181
Query: 174 ISRLLRQSSLAPEVKEQSLSTLWNLSVDEKLCIKIAESDILLLAIKYLDDEDIKVKEAAG 233
I+RLL QSSLA EVK QSL+ LWNLSVDEKL +KIA+SD+LLLA+KYLDDED+KVKEAAG
Sbjct: 182 INRLLTQSSLASEVKVQSLNMLWNLSVDEKLRVKIAKSDLLLLAMKYLDDEDMKVKEAAG 241
Query: 234 GILANLALSRANHNIMVEAGVIPKLAKFLMPNSEGSKVIRKEARNALLELVKDEYYKILV 293
GILANLALS NH++MVEAGVIPKLAKFL SE S+VIRKEARNALLELVKD+YY+ILV
Sbjct: 242 GILANLALSHVNHDMMVEAGVIPKLAKFLPYESEVSRVIRKEARNALLELVKDDYYRILV 301
Query: 294 IEEGLVPVPLVGAAAYKSFTPGLHLWPTLPDGSEIERTSRQPSRFGASDLLLGLNIDDKD 353
IEEGLVPVPL+GAAAYKS+ P + P PDG+EIERT +PSRFGA++LL+GLN+D+ +
Sbjct: 302 IEEGLVPVPLIGAAAYKSYNPRSYEAPAFPDGTEIERTYDKPSRFGAAELLIGLNVDN-N 360
Query: 354 PNIEEAKINAIVGRTQQRFLARIGAIEMEEKTIPQTECSNDQ-RVTLLPWVDGVARLVLI 412
N++EAK+NAI+G+TQQ+FL R+GAIEMEE T ++ECS+DQ R+TLL W+DGVARLVLI
Sbjct: 361 ANVDEAKVNAIIGQTQQQFLVRVGAIEMEE-TSTRSECSDDQPRLTLLHWIDGVARLVLI 419
Query: 413 LELEDKSAILRAAESIANACINEHMRIAFKEAGAIKHLIRLLTCDDNTVQLAATQALEKL 472
LELEDKSAI+RAAESIA+ACINEHMRIAFKEAGA++HL+RLL+ +DN VQLAATQALEKL
Sbjct: 420 LELEDKSAIVRAAESIASACINEHMRIAFKEAGAVRHLVRLLSWNDNAVQLAATQALEKL 479
Query: 473 SASQGVCRVIEAEGVLGPLVSILKSSGIAGTIVEKSLDILARIFDPSKEMQLK 525
SAS VCRVIE EG L PLVSILK S +AG I EKSL++LA+I DP+KEMQLK
Sbjct: 480 SASNVVCRVIETEGGLAPLVSILKCSDVAGAIAEKSLNVLAQILDPNKEMQLK 532
>Medtr1g031750.3 | armadillo/beta-catenin-like repeat protein,
putative | HC | chr1:11138398-11131640 | 20130731
Length = 538
Score = 678 bits (1749), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 347/473 (73%), Positives = 402/473 (84%), Gaps = 6/473 (1%)
Query: 55 NGRGDGGAVDANSLPGIDAVESESSGR-SDGYVALFVRMLGLDHDFLDREQAIVALWKYS 113
NG D A+ P ID VESESS D YVALFVRMLGLDHD LDREQAI+ LW+YS
Sbjct: 64 NGHSDHSTAPAS--PEIDEVESESSSDFGDSYVALFVRMLGLDHDPLDREQAIITLWQYS 121
Query: 114 LGGKKCVDSIMQFPGCINLVVNLLRXXXXXXXXXXXGLLRSLSSVNLYRNSVADSGAIEE 173
LGGKK +D+IMQFPGCINLVVNLLR GLL+SLSS++ YRNSVADSGAIEE
Sbjct: 122 LGGKKYIDNIMQFPGCINLVVNLLRAESSSACEAAAGLLQSLSSIDQYRNSVADSGAIEE 181
Query: 174 ISRLLRQSSLAPEVKEQSLSTLWNLSVDEKLCIKIAESDILLLAIKYLDDEDIKVKEAAG 233
I+RLL QSSLA EVK QSL+ LWNLSVDEKL +KIA+SD+LLLA+KYLDDED+KVKEAAG
Sbjct: 182 INRLLTQSSLASEVKVQSLNMLWNLSVDEKLRVKIAKSDLLLLAMKYLDDEDMKVKEAAG 241
Query: 234 GILANLALSRANHNIMVEAGVIPKLAKFLMPNSEGSKVIRKEARNALLELVKDEYYKILV 293
GILANLALS NH++MVEAGVIPKLAKFL SE S+VIRKEARNALLELVKD+YY+ILV
Sbjct: 242 GILANLALSHVNHDMMVEAGVIPKLAKFLPYESEVSRVIRKEARNALLELVKDDYYRILV 301
Query: 294 IEEGLVPVPLVGAAAYKSFTPGLHLWPTLPDGSEIERTSRQPSRFGASDLLLGLNIDDKD 353
IEEGLVPVPL+GAAAYKS+ P + P PDG+EIERT +PSRFGA++LL+GLN+D+ +
Sbjct: 302 IEEGLVPVPLIGAAAYKSYNPRSYEAPAFPDGTEIERTYDKPSRFGAAELLIGLNVDN-N 360
Query: 354 PNIEEAKINAIVGRTQQRFLARIGAIEMEEKTIPQTECSNDQ-RVTLLPWVDGVARLVLI 412
N++EAK+NAI+G+TQQ+FL R+GAIEMEE T ++ECS+DQ R+TLL W+DGVARLVLI
Sbjct: 361 ANVDEAKVNAIIGQTQQQFLVRVGAIEMEE-TSTRSECSDDQPRLTLLHWIDGVARLVLI 419
Query: 413 LELEDKSAILRAAESIANACINEHMRIAFKEAGAIKHLIRLLTCDDNTVQLAATQALEKL 472
LELEDKSAI+RAAESIA+ACINEHMRIAFKEAGA++HL+RLL+ +DN VQLAATQALEKL
Sbjct: 420 LELEDKSAIVRAAESIASACINEHMRIAFKEAGAVRHLVRLLSWNDNAVQLAATQALEKL 479
Query: 473 SASQGVCRVIEAEGVLGPLVSILKSSGIAGTIVEKSLDILARIFDPSKEMQLK 525
SAS VCRVIE EG L PLVSILK S +AG I EKSL++LA+I DP+KEMQLK
Sbjct: 480 SASNVVCRVIETEGGLAPLVSILKCSDVAGAIAEKSLNVLAQILDPNKEMQLK 532
>Medtr3g466220.2 | ARM repeat RING/U-box protein | HC |
chr3:27221042-27216195 | 20130731
Length = 836
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 6/174 (3%)
Query: 128 GCINLVVNLLRXXXXXXXXXXXGLLRSLSSVNLYRNSVADSGAIEEISRLLRQSSLAPEV 187
G IN++V+LL+ L +LS + + ++A++GAIE + +L S PE
Sbjct: 593 GAINILVDLLQSADSRVQENAVTALLNLSINDNNKTAIANAGAIEPLIHVLEHGS--PEA 650
Query: 188 KEQSLSTLWNLSVDEKLCIKIAESDILLLAIKYLDDEDIKVKEAAGGILANLALSRANHN 247
KE S +TL++LSV E+ + I S + + L + + K+ A L NL++ N N
Sbjct: 651 KENSAATLFSLSVIEENKVNIGRSGAIRPLVDLLGNGTPRGKKDAATALFNLSIFHENKN 710
Query: 248 IMVEAGVIPKLAKFLMPNSEGSKVIRKEARNALLELVKDEYYKILVIEEGLVPV 301
+V+AG + L + + P + ++ K A L L +I + +EG +PV
Sbjct: 711 RIVQAGAVKHLVELMDP---AAGMVDK-AVAVLANLATIPEGRIAIGQEGGIPV 760
>Medtr3g466220.3 | ARM repeat RING/U-box protein | HC |
chr3:27221042-27216195 | 20130731
Length = 836
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 6/174 (3%)
Query: 128 GCINLVVNLLRXXXXXXXXXXXGLLRSLSSVNLYRNSVADSGAIEEISRLLRQSSLAPEV 187
G IN++V+LL+ L +LS + + ++A++GAIE + +L S PE
Sbjct: 593 GAINILVDLLQSADSRVQENAVTALLNLSINDNNKTAIANAGAIEPLIHVLEHGS--PEA 650
Query: 188 KEQSLSTLWNLSVDEKLCIKIAESDILLLAIKYLDDEDIKVKEAAGGILANLALSRANHN 247
KE S +TL++LSV E+ + I S + + L + + K+ A L NL++ N N
Sbjct: 651 KENSAATLFSLSVIEENKVNIGRSGAIRPLVDLLGNGTPRGKKDAATALFNLSIFHENKN 710
Query: 248 IMVEAGVIPKLAKFLMPNSEGSKVIRKEARNALLELVKDEYYKILVIEEGLVPV 301
+V+AG + L + + P + ++ K A L L +I + +EG +PV
Sbjct: 711 RIVQAGAVKHLVELMDP---AAGMVDK-AVAVLANLATIPEGRIAIGQEGGIPV 760
>Medtr3g466220.1 | ARM repeat RING/U-box protein | HC |
chr3:27221042-27216195 | 20130731
Length = 836
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 6/174 (3%)
Query: 128 GCINLVVNLLRXXXXXXXXXXXGLLRSLSSVNLYRNSVADSGAIEEISRLLRQSSLAPEV 187
G IN++V+LL+ L +LS + + ++A++GAIE + +L S PE
Sbjct: 593 GAINILVDLLQSADSRVQENAVTALLNLSINDNNKTAIANAGAIEPLIHVLEHGS--PEA 650
Query: 188 KEQSLSTLWNLSVDEKLCIKIAESDILLLAIKYLDDEDIKVKEAAGGILANLALSRANHN 247
KE S +TL++LSV E+ + I S + + L + + K+ A L NL++ N N
Sbjct: 651 KENSAATLFSLSVIEENKVNIGRSGAIRPLVDLLGNGTPRGKKDAATALFNLSIFHENKN 710
Query: 248 IMVEAGVIPKLAKFLMPNSEGSKVIRKEARNALLELVKDEYYKILVIEEGLVPV 301
+V+AG + L + + P + ++ K A L L +I + +EG +PV
Sbjct: 711 RIVQAGAVKHLVELMDP---AAGMVDK-AVAVLANLATIPEGRIAIGQEGGIPV 760
>Medtr3g466220.4 | ARM repeat RING/U-box protein | HC |
chr3:27220979-27216195 | 20130731
Length = 815
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 88/174 (50%), Gaps = 6/174 (3%)
Query: 128 GCINLVVNLLRXXXXXXXXXXXGLLRSLSSVNLYRNSVADSGAIEEISRLLRQSSLAPEV 187
G IN++V+LL+ L +LS + + ++A++GAIE + +L S PE
Sbjct: 572 GAINILVDLLQSADSRVQENAVTALLNLSINDNNKTAIANAGAIEPLIHVLEHGS--PEA 629
Query: 188 KEQSLSTLWNLSVDEKLCIKIAESDILLLAIKYLDDEDIKVKEAAGGILANLALSRANHN 247
KE S +TL++LSV E+ + I S + + L + + K+ A L NL++ N N
Sbjct: 630 KENSAATLFSLSVIEENKVNIGRSGAIRPLVDLLGNGTPRGKKDAATALFNLSIFHENKN 689
Query: 248 IMVEAGVIPKLAKFLMPNSEGSKVIRKEARNALLELVKDEYYKILVIEEGLVPV 301
+V+AG + L + + P + ++ K A L L +I + +EG +PV
Sbjct: 690 RIVQAGAVKHLVELMDP---AAGMVDK-AVAVLANLATIPEGRIAIGQEGGIPV 739
>Medtr2g018010.1 | plant U-box protein | HC | chr2:5283903-5286935 |
20130731
Length = 720
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 72/136 (52%), Gaps = 6/136 (4%)
Query: 102 REQAIVALWKYSLGGKKCVDSIMQFPGCINLVVNLLRX-XXXXXXXXXXGLLRSLSSVNL 160
+E ++ AL S+ K IM C+ +VN+LR L SLS+V+
Sbjct: 453 QENSVTALLNLSIYDKN-KSRIMDEASCLVSIVNVLRFGHTTEARENAAATLFSLSAVHD 511
Query: 161 YRNSVAD-SGAIEEISRLLRQSSLAPEVKEQSLSTLWNLSVDEKLCIKIAESDILLLAIK 219
Y+ +AD +GA+E ++ LL+ + P K+ +++ L+NLS C+++ E+ + ++
Sbjct: 512 YKKIIADETGAVEALAGLLQDGT--PRGKKDAVTALFNLSTHTDNCVRMIEAGAVTALVE 569
Query: 220 YLDDEDIKVKEAAGGI 235
L +E + +EAAG I
Sbjct: 570 ALGNEGV-AEEAAGAI 584
>Medtr6g004790.1 | armadillo/beta-catenin-like repeat protein | HC |
chr6:421032-419353 | 20130731
Length = 329
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 124/260 (47%), Gaps = 13/260 (5%)
Query: 83 DGYVALFVRMLGLDHDFLDREQAIVALWKYSLGGKKCVDSIMQFPGCINLVVNLLRXXXX 142
G + V ML +F E ++ A S G ++ I+++ G + +++NLL
Sbjct: 38 SGVMVPLVSMLH-SQNFEAIEASLCAFLSLSFGSERNKIRIVRY-GVLPILLNLLHCESQ 95
Query: 143 XXXXXXXGLLRSLSSVNLYRNSVADSGAIEEISRLLRQSSLAPEVKEQSLSTLWNLSVDE 202
+ +LSS + ++A SGA++ + L+ S++ + + +++TL NL+ +
Sbjct: 96 TVIQLSVAAMLTLSSCKRNKVAIASSGAVQILVELINNSNIETQSQLDTIATLHNLTSCQ 155
Query: 203 KLCIKIAESDILLLAIKYLDDEDIK---VKEAAGGILANLALSRANHNIMVEAGVIPKLA 259
++ IA S ++ ++ + D +K + E A G+L N+ S + + + EA I
Sbjct: 156 EIIPLIASSGVIFSLLELIHD-SVKSSLLVEKAIGLLENIVSS--SESALCEAASIGGAI 212
Query: 260 KFLMPNSE-GSKVIRKEARNALLELVKD--EYYKILVIEEGLVP--VPLVGAAAYKSFTP 314
+ L+ E GS + ++ A LL + + E Y++L++ +G++P + L +++ +
Sbjct: 213 RILVETIEDGSSLGKEHAVGILLLICQSCREKYRVLILTDGVMPGLLQLTVDGTWRAKST 272
Query: 315 GLHLWPTLPDGSEIERTSRQ 334
L L D S S Q
Sbjct: 273 ARELLLLLRDCSSYSSRSTQ 292