Miyakogusa Predicted Gene

Lj0g3v0273799.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0273799.1 tr|C1FGE2|C1FGE2_MICSR Cwf15/Cwc15 cell cycle
control family protein OS=Micromonas sp. (strain
RCC29,63.51,8e-18,Cwf_Cwc_15,Cwf15/Cwc15 cell cycle control protein;
SUBFAMILY NOT NAMED,NULL; CELL CYCLE CONTROL PROT,CUFF.18136.1
         (144 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g100970.1 | Cwf15/cwc15 cell cycle control protein | HC | ...   166   9e-42

>Medtr4g100970.1 | Cwf15/cwc15 cell cycle control protein | HC |
           chr4:41689276-41685378 | 20130731
          Length = 227

 Score =  166 bits (419), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 80/108 (74%), Positives = 85/108 (78%)

Query: 1   MTTAAQPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRGDRQDTHDXXXXXXXX 60
           MTTAA+PTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPR D QDT D        
Sbjct: 1   MTTAARPTWAPAKGGNEQGGTRIFGPSQKYSSRDIASHTTLKPRKDGQDTQDELKRRNLR 60

Query: 61  XXXXXXXXXHFSSKNKSYSDDRDHGKSNRLFLEGTKRDVEDNIVARSV 108
                    HFSSKNKSY+DDRDHG+S  LFLEGTKRD+EDNI+ RSV
Sbjct: 61  DELDERERRHFSSKNKSYNDDRDHGRSGHLFLEGTKRDIEDNIIPRSV 108