Miyakogusa Predicted Gene

Lj0g3v0273669.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0273669.1 Non Characterized Hit- tr|F0Y7C7|F0Y7C7_AURAN
Putative uncharacterized protein (Fragment)
OS=Aureoco,46.3,4e-18,PH_DOMAIN,Pleckstrin homology domain; Pleckstrin
homology domain.,Pleckstrin homology domain; PH,Ple,CUFF.18121.1
         (148 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g463520.1 | pleckstrin-like (PH) domain protein | HC | chr...   245   9e-66
Medtr5g082470.1 | pleckstrin-like (PH) domain protein | HC | chr...   216   6e-57

>Medtr3g463520.1 | pleckstrin-like (PH) domain protein | HC |
           chr3:25445194-25445933 | 20130731
          Length = 148

 Score =  245 bits (626), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 114/146 (78%), Positives = 126/146 (86%)

Query: 1   MENLWRVATGQDPNPEDYTGIEFWSNPERAGWLTKQGDYIKTWRRRWFVLKQGKLFWFKD 60
           MENLWR ATGQ+PNP DYTGI+FWSNPER+GWLTKQGDYIKTWRRRWFVLKQGKLFWFK+
Sbjct: 1   MENLWRSATGQEPNPSDYTGIQFWSNPERSGWLTKQGDYIKTWRRRWFVLKQGKLFWFKE 60

Query: 61  XXXXXXXXXVPRGVISAATSLTVKGAEDVLHKPFSFELSTPHSTMFFVADCDKDKEDWIN 120
                    VPRGVIS +T LTVKGAEDVLHK  +FELSTP +TMFF+AD DKDKEDWIN
Sbjct: 61  PSAATSPSSVPRGVISVSTCLTVKGAEDVLHKASAFELSTPQTTMFFIADNDKDKEDWIN 120

Query: 121 SIGRAIVLHSRSHAHSEVLDYENKAT 146
           SIGRAIVL SRSHA SEV+DY N+++
Sbjct: 121 SIGRAIVLGSRSHAASEVIDYNNQSS 146


>Medtr5g082470.1 | pleckstrin-like (PH) domain protein | HC |
           chr5:35440368-35439530 | 20130731
          Length = 144

 Score =  216 bits (550), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 100/141 (70%), Positives = 116/141 (82%), Gaps = 2/141 (1%)

Query: 3   NLWRVATGQDPNPEDYTGIEFWSNPERAGWLTKQGDYIKTWRRRWFVLKQGKLFWFKDXX 62
           +LWR ATG   NP DY+G+EFWSNPER GWLTKQG+YIKTWRRRWFVLKQGKLFWFK+  
Sbjct: 4   SLWRYATGSTTNPVDYSGVEFWSNPERTGWLTKQGEYIKTWRRRWFVLKQGKLFWFKEST 63

Query: 63  XXXXXXXVPRGVISAATSLTVKGAEDVLHKPFSFELSTPHSTMFFVADCDKDKEDWINSI 122
                  +PRGVI  AT LTVKGAED+LHKP++FELST   TM+F+AD DK+KEDWINSI
Sbjct: 64  ITRAS--IPRGVIPVATCLTVKGAEDILHKPYAFELSTRADTMYFIADSDKEKEDWINSI 121

Query: 123 GRAIVLHSRSHAHSEVLDYEN 143
           GR+IVLHSRS   SE++DY+N
Sbjct: 122 GRSIVLHSRSVTDSEIIDYDN 142