Miyakogusa Predicted Gene
- Lj0g3v0273499.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0273499.1 Non Characterized Hit- tr|A5AMC2|A5AMC2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,75.09,0,HELICASE_ATP_BIND_1,Helicase, superfamily 1/2, ATP-binding
domain; SUBFAMILY NOT NAMED,NULL; ATP-DEP,CUFF.18116.1
(326 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g098440.1 | Pre-mRNA-splicing factor ATP-dependent RNA hel... 408 e-114
Medtr3g054400.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 401 e-112
Medtr1g023985.1 | ATP-dependent RNA helicase DHX8 | HC | chr1:77... 176 2e-44
Medtr1g023985.2 | ATP-dependent RNA helicase DHX8 | HC | chr1:77... 176 2e-44
Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 153 2e-37
Medtr6g061840.3 | pre-mRNA-splicing factor ATP-dependent RNA hel... 153 3e-37
Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA hel... 152 3e-37
Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 152 3e-37
Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA hel... 148 7e-36
Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 148 7e-36
Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA hel... 148 7e-36
Medtr1g114490.1 | ATP-dependent RNA helicase DHX8 | HC | chr1:51... 145 6e-35
Medtr2g015320.1 | ATP-dependent RNA helicase DHX35 | HC | chr2:4... 131 8e-31
Medtr7g095080.1 | ATP-dependent RNA helicase DHX35 | HC | chr7:3... 129 3e-30
Medtr1g086640.1 | pre-mRNA splicing factor ATP-dependent RNA hel... 122 4e-28
Medtr8g080240.1 | pre-mRNA splicing factor ATP-dependent RNA hel... 122 6e-28
Medtr8g080240.3 | pre-mRNA splicing factor ATP-dependent RNA hel... 121 7e-28
Medtr8g080240.2 | pre-mRNA splicing factor ATP-dependent RNA hel... 121 7e-28
Medtr4g023590.1 | ATP-dependent RNA helicase DHX37-like protein,... 113 2e-25
Medtr3g052610.1 | Pre-mRNA-splicing factor ATP-dependent RNA hel... 109 4e-24
Medtr8g044260.1 | ATP-dependent RNA helicase DHX36-like protein ... 105 4e-23
Medtr8g041990.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 105 4e-23
Medtr8g106630.1 | ATP-dependent RNA helicase DHX36-like protein ... 100 1e-21
Medtr8g106630.3 | ATP-dependent RNA helicase DHX36-like protein ... 100 1e-21
Medtr8g106630.5 | ATP-dependent RNA helicase DHX36-like protein ... 100 1e-21
Medtr8g106630.2 | ATP-dependent RNA helicase DHX36-like protein ... 100 1e-21
Medtr8g106630.4 | ATP-dependent RNA helicase DHX36-like protein ... 100 1e-21
Medtr1g109170.2 | ATP-dependent RNA helicase DHX36-like protein ... 98 8e-21
Medtr1g109170.1 | ATP-dependent RNA helicase DHX36-like protein ... 98 1e-20
Medtr1g056490.1 | ATP-dependent RNA helicase | HC | chr1:2472920... 97 2e-20
Medtr4g485610.1 | pre-mRNA-splicing factor ATP-dependent RNA hel... 89 5e-18
Medtr5g090430.2 | ATP-dependent RNA helicase, putative | HC | ch... 86 4e-17
Medtr5g090430.1 | ATP-dependent RNA helicase, putative | HC | ch... 86 5e-17
Medtr4g134790.1 | ATP-dependent RNA helicase | HC | chr4:5652988... 82 5e-16
Medtr4g134790.2 | ATP-dependent RNA helicase | HC | chr4:5652988... 82 5e-16
Medtr3g014030.1 | helicase, IBR and zinc finger protein | HC | c... 79 8e-15
Medtr1g088590.1 | zinc finger CCCH domain protein | HC | chr1:39... 78 1e-14
Medtr3g086770.1 | helicase, IBR and zinc finger protein | HC | c... 75 1e-13
Medtr4g120070.1 | RNA helicase, putative | HC | chr4:49772806-49... 71 1e-12
Medtr0267s0070.1 | NB-ARC domain disease resistance protein, put... 62 7e-10
>Medtr2g098440.1 | Pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr2:42091662-42101447 | 20130731
Length = 1269
Score = 408 bits (1049), Expect = e-114, Method: Compositional matrix adjust.
Identities = 213/293 (72%), Positives = 241/293 (82%), Gaps = 18/293 (6%)
Query: 33 RRSSVYDAVVAKKKLSH-------WEDRQLINSGVVRRGIQTCEFDDDEEEHTKVTLLVH 85
RR ++ KKLS WEDRQL+ SG VR EFDD++E KV LLVH
Sbjct: 389 RRDGTKMSLSQSKKLSQLTADNAQWEDRQLLRSGAVRGTEVQTEFDDEDER--KVILLVH 446
Query: 86 DTKPPFLDGRLVFTKQADPIMPIKDPTSDMAIISCKGSNLVRKIHEKQSMDKSRKHFWEL 145
DTKPPFLDGR+V+TKQA+PIMPIKDPTSDMA+IS KGS LVR+IHEKQS +KSR+ FWEL
Sbjct: 447 DTKPPFLDGRVVYTKQAEPIMPIKDPTSDMALISRKGSALVREIHEKQSSNKSRQRFWEL 506
Query: 146 AGSKLGDILGVEKTAEEMDA----VGQDGKIDL---PKFSQHLNKREEAVSEFAKSKSMS 198
AGSKLGDILGVEKTAE++DA VG+DG+ID KFS H+ K+ EAVS+FA SK+++
Sbjct: 507 AGSKLGDILGVEKTAEQIDADTAVVGEDGEIDFKEEAKFSNHM-KKGEAVSDFAMSKTLA 565
Query: 199 EQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGGIVGCTQP 258
EQRQYLPIFSVREELLQVIRENQ GETGSGK+TQL QYL+EDGYT+ GGIVGCTQP
Sbjct: 566 EQRQYLPIFSVREELLQVIRENQVVVVVGETGSGKTTQLTQYLYEDGYTI-GGIVGCTQP 624
Query: 259 RRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRETL 311
RRVAAMSVAKRVSEEM+TELGD+VGYAIRFEDVTGPNT+IKYMTDGVLLRETL
Sbjct: 625 RRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPNTVIKYMTDGVLLRETL 677
>Medtr3g054400.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase PRP16 | HC | chr3:21592985-21589785 | 20130731
Length = 1066
Score = 401 bits (1031), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/293 (72%), Positives = 241/293 (82%), Gaps = 19/293 (6%)
Query: 33 RRSSVYDAVVAKKKLSH------WEDRQLINSGVVRRGIQT-CEFDDDEEEHTKVTLLVH 85
RR ++ KKLS WEDRQL+ SG VR GI+ EFDD++E KV L+VH
Sbjct: 187 RRDGTKMSLSQSKKLSQLTDNARWEDRQLLRSGAVR-GIEVKTEFDDEDE--GKVVLVVH 243
Query: 86 DTKPPFLDGRLVFTKQADPIMPIKDPTSDMAIISCKGSNLVRKIHEKQSMDKSRKHFWEL 145
DTKP FLDGR+VFTKQA+P+MPIKDPTSDMAIIS KGS +VR+IH KQS +K R+ FWEL
Sbjct: 244 DTKPHFLDGRIVFTKQAEPVMPIKDPTSDMAIISRKGSAMVREIHGKQSSNKCRQRFWEL 303
Query: 146 AGSKLGDILGVEKTAEEMDA----VGQDGKIDL---PKFSQHLNKREEAVSEFAKSKSMS 198
AGSKLGDILGVEKTAE +DA VG+DG+ID KFS H+ K+EEAVS+FA SK+++
Sbjct: 304 AGSKLGDILGVEKTAENIDADTCIVGEDGEIDFKEEAKFSNHM-KKEEAVSDFAVSKTLT 362
Query: 199 EQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGGIVGCTQP 258
EQRQYLPIFSVREELLQVIRENQ GETGSGK+TQL QYL+EDGYT+ GGIVGCTQP
Sbjct: 363 EQRQYLPIFSVREELLQVIRENQVVVVVGETGSGKTTQLTQYLYEDGYTI-GGIVGCTQP 421
Query: 259 RRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRETL 311
RRVAAMSVAKRVSEEM+TELGD+VGYAIRFEDVTGPNTIIKYMTDGVLLRETL
Sbjct: 422 RRVAAMSVAKRVSEEMDTELGDKVGYAIRFEDVTGPNTIIKYMTDGVLLRETL 474
>Medtr1g023985.1 | ATP-dependent RNA helicase DHX8 | HC |
chr1:7751166-7755800 | 20130731
Length = 1223
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 163/280 (58%), Gaps = 25/280 (8%)
Query: 49 HWEDRQLINSGVVRRGIQTCEFDDD--------EEEHTKVTLLVHDTKPPFLDGRLVFTK 100
WE +QLI SGV+ + +DD+ E ++ + +++ +P FL G+ ++
Sbjct: 405 RWEAKQLIASGVLSVS-EYPTYDDEGDGVMYQEEGAEEELEIEMNEDEPAFLQGQSRYSM 463
Query: 101 QADPIMPIKDPTSDMAIISCKGSNLV---RKIHEKQ------SMDKSRKHFWELAGSKLG 151
P+ K+P + + S L+ R++ E+Q S+ K WE + G
Sbjct: 464 DMSPVKIFKNPEGSLGRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPESG 523
Query: 152 DILGVEKTAEEMDAVGQDGKIDLPKFSQHLNKREEAVSEFAKSKSMSEQRQYLPIFSVRE 211
+ A+E+ VG D+P++ + + + +K S+ EQRQ LPI+ +++
Sbjct: 524 E----RHLAQELRGVGLSA-YDMPEWKKDAYGKTITFGQRSKL-SIQEQRQSLPIYKLKK 577
Query: 212 ELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGGIVGCTQPRRVAAMSVAKRVS 271
EL+Q + +NQ GETGSGK+TQ+ QYL E GYT G I GCTQPRRVAAMSVAKRV+
Sbjct: 578 ELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKI-GCTQPRRVAAMSVAKRVA 636
Query: 272 EEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRETL 311
EE LG++VGYAIRFED TGP+T+IKYMTDG+LLRE L
Sbjct: 637 EEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 676
>Medtr1g023985.2 | ATP-dependent RNA helicase DHX8 | HC |
chr1:7751166-7755800 | 20130731
Length = 1223
Score = 176 bits (447), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/280 (40%), Positives = 163/280 (58%), Gaps = 25/280 (8%)
Query: 49 HWEDRQLINSGVVRRGIQTCEFDDD--------EEEHTKVTLLVHDTKPPFLDGRLVFTK 100
WE +QLI SGV+ + +DD+ E ++ + +++ +P FL G+ ++
Sbjct: 405 RWEAKQLIASGVLSVS-EYPTYDDEGDGVMYQEEGAEEELEIEMNEDEPAFLQGQSRYSM 463
Query: 101 QADPIMPIKDPTSDMAIISCKGSNLV---RKIHEKQ------SMDKSRKHFWELAGSKLG 151
P+ K+P + + S L+ R++ E+Q S+ K WE + G
Sbjct: 464 DMSPVKIFKNPEGSLGRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPESG 523
Query: 152 DILGVEKTAEEMDAVGQDGKIDLPKFSQHLNKREEAVSEFAKSKSMSEQRQYLPIFSVRE 211
+ A+E+ VG D+P++ + + + +K S+ EQRQ LPI+ +++
Sbjct: 524 E----RHLAQELRGVGLSA-YDMPEWKKDAYGKTITFGQRSKL-SIQEQRQSLPIYKLKK 577
Query: 212 ELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGGIVGCTQPRRVAAMSVAKRVS 271
EL+Q + +NQ GETGSGK+TQ+ QYL E GYT G I GCTQPRRVAAMSVAKRV+
Sbjct: 578 ELIQAVHDNQVLVVIGETGSGKTTQVTQYLAEAGYTTRGKI-GCTQPRRVAAMSVAKRVA 636
Query: 272 EEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRETL 311
EE LG++VGYAIRFED TGP+T+IKYMTDG+LLRE L
Sbjct: 637 EEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 676
>Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr5:31994096-31996650 | 20130731
Length = 808
Score = 153 bits (387), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 98/133 (73%), Gaps = 5/133 (3%)
Query: 184 REEAVSEFAKSK-----SMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLA 238
+EE SE +++K ++ E+R+ LPI+ ++E LQ + ++Q GETGSGK+TQ+
Sbjct: 184 QEEIASEKSRAKRSAYEALKEERKKLPIYPFKDEFLQAVHDHQVLVIVGETGSGKTTQIP 243
Query: 239 QYLHEDGYTVGGGIVGCTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVTGPNTII 298
QYLHE GYT G ++ CTQPRRVAAMSVA RVS+EM +LG +VGY+IRFED T TI+
Sbjct: 244 QYLHEAGYTKDGRMIACTQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSEKTIV 303
Query: 299 KYMTDGVLLRETL 311
KYMTDG+LLRE L
Sbjct: 304 KYMTDGMLLREFL 316
>Medtr6g061840.3 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 587
Score = 153 bits (386), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 91/116 (78%)
Query: 196 SMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGGIVGC 255
++ E+R+ LP+++VR++ LQ + ++Q GETGSGK+TQ+ QYLHE GYT G ++ C
Sbjct: 246 AIREERKKLPVYAVRDKFLQAVHDHQVLVIVGETGSGKTTQIPQYLHEAGYTKHGKMIAC 305
Query: 256 TQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRETL 311
TQPRRVAAMSVA RVS+EM +LG +VGY+IRFED T TI+KYMTDG+LLRE L
Sbjct: 306 TQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSKKTIVKYMTDGMLLREFL 361
>Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 768
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 91/116 (78%)
Query: 196 SMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGGIVGC 255
++ E+R+ LP+++VR++ LQ + ++Q GETGSGK+TQ+ QYLHE GYT G ++ C
Sbjct: 246 AIREERKKLPVYAVRDKFLQAVHDHQVLVIVGETGSGKTTQIPQYLHEAGYTKHGKMIAC 305
Query: 256 TQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRETL 311
TQPRRVAAMSVA RVS+EM +LG +VGY+IRFED T TI+KYMTDG+LLRE L
Sbjct: 306 TQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSKKTIVKYMTDGMLLREFL 361
>Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr6:24007593-24013184 | 20130731
Length = 904
Score = 152 bits (385), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 69/116 (59%), Positives = 91/116 (78%)
Query: 196 SMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGGIVGC 255
++ E+R+ LP+++VR++ LQ + ++Q GETGSGK+TQ+ QYLHE GYT G ++ C
Sbjct: 246 AIREERKKLPVYAVRDKFLQAVHDHQVLVIVGETGSGKTTQIPQYLHEAGYTKHGKMIAC 305
Query: 256 TQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRETL 311
TQPRRVAAMSVA RVS+EM +LG +VGY+IRFED T TI+KYMTDG+LLRE L
Sbjct: 306 TQPRRVAAMSVAARVSQEMGVKLGHEVGYSIRFEDCTSKKTIVKYMTDGMLLREFL 361
>Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 93/120 (77%), Gaps = 1/120 (0%)
Query: 192 AKSKSMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGG 251
+ ++++ E+R+ LPI++ R+ELLQ + ++Q GETGSGK+TQ+ QYLHE GYT G
Sbjct: 400 SAAEALQEERKKLPIYTYRDELLQAVHDHQVLVIVGETGSGKTTQIPQYLHEAGYT-KHG 458
Query: 252 IVGCTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRETL 311
++ CTQPRRVAAMSVA RV+ E+ +LG +VGY+IRFED T TI+KYMTDG+LLRE L
Sbjct: 459 MIACTQPRRVAAMSVAARVAHELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFL 518
>Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 93/120 (77%), Gaps = 1/120 (0%)
Query: 192 AKSKSMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGG 251
+ ++++ E+R+ LPI++ R+ELLQ + ++Q GETGSGK+TQ+ QYLHE GYT G
Sbjct: 400 SAAEALQEERKKLPIYTYRDELLQAVHDHQVLVIVGETGSGKTTQIPQYLHEAGYT-KHG 458
Query: 252 IVGCTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRETL 311
++ CTQPRRVAAMSVA RV+ E+ +LG +VGY+IRFED T TI+KYMTDG+LLRE L
Sbjct: 459 MIACTQPRRVAAMSVAARVAHELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFL 518
>Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:7279343-7291756 | 20130731
Length = 1055
Score = 148 bits (374), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 69/120 (57%), Positives = 93/120 (77%), Gaps = 1/120 (0%)
Query: 192 AKSKSMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGG 251
+ ++++ E+R+ LPI++ R+ELLQ + ++Q GETGSGK+TQ+ QYLHE GYT G
Sbjct: 400 SAAEALQEERKKLPIYTYRDELLQAVHDHQVLVIVGETGSGKTTQIPQYLHEAGYT-KHG 458
Query: 252 IVGCTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRETL 311
++ CTQPRRVAAMSVA RV+ E+ +LG +VGY+IRFED T TI+KYMTDG+LLRE L
Sbjct: 459 MIACTQPRRVAAMSVAARVAHELGVKLGHEVGYSIRFEDCTSDKTILKYMTDGMLLREFL 518
>Medtr1g114490.1 | ATP-dependent RNA helicase DHX8 | HC |
chr1:51667204-51673502 | 20130731
Length = 1154
Score = 145 bits (366), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 144/280 (51%), Gaps = 59/280 (21%)
Query: 49 HWEDRQLINSGVVRRGIQTCEFDDDEE--------EHTKVTLLVHDTKPPFLDGRLVFTK 100
WE +QLI SGV+ + +DD+E+ ++ + +++ +P FL G+ ++
Sbjct: 370 RWEAQQLIASGVLSVS-EYPTYDDEEDGVMYQEEGAEEELEIEMNEDEPAFLQGQSRYSM 428
Query: 101 QADPIMPIKDPTSDMAIISCKGSNLV---RKIHEKQ------SMDKSRKHFWELAGSKLG 151
P+ K+P + + S L+ R++ E+Q S+ K WE + G
Sbjct: 429 DMSPVKIFKNPEGSLGRAAALQSALIKERREVREQQQRTMLDSIPKDLNRPWEDPMPESG 488
Query: 152 DILGVEKTAEEMDAVGQDGKIDLPKFSQHLNKREEAVSEFAKSKSMSEQRQYLPIFSVRE 211
+ A+E+ VG D+P++ +
Sbjct: 489 E----RHLAQELRGVGLSA-YDMPEWKK-------------------------------- 511
Query: 212 ELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGGIVGCTQPRRVAAMSVAKRVS 271
+ + +NQ GETGSGK+TQ+ QYL E GYT G I GCTQPRRVAAMSVAKRV+
Sbjct: 512 ---EAVHDNQVLVVIGETGSGKTTQVTQYLAEVGYTTRGKI-GCTQPRRVAAMSVAKRVA 567
Query: 272 EEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRETL 311
EE LG++VGYAIRFED TGP+T+IKYMTDG+LLRE L
Sbjct: 568 EEFGCRLGEEVGYAIRFEDCTGPDTVIKYMTDGMLLREIL 607
>Medtr2g015320.1 | ATP-dependent RNA helicase DHX35 | HC |
chr2:4513881-4525364 | 20130731
Length = 701
Score = 131 bits (330), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 85/117 (72%), Gaps = 1/117 (0%)
Query: 197 MSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGGIVGCT 256
+ +QRQ LP++ R +L ++ + GETGSGK+TQ+ QYL E G+ GG ++ CT
Sbjct: 46 IDKQRQRLPVYKYRNAILYLVETHSTTIIVGETGSGKTTQIPQYLIEAGWASGGRLIACT 105
Query: 257 QPRRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVTGPN-TIIKYMTDGVLLRETLN 312
QPRR+A +V+ RV++EM +LGDQVGY IRFEDVT + T++K++TDGVLLRE +N
Sbjct: 106 QPRRLAVQAVSSRVAQEMGVKLGDQVGYTIRFEDVTNQDETVLKFVTDGVLLREMMN 162
>Medtr7g095080.1 | ATP-dependent RNA helicase DHX35 | HC |
chr7:38011601-38003021 | 20130731
Length = 725
Score = 129 bits (325), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/130 (50%), Positives = 92/130 (70%), Gaps = 2/130 (1%)
Query: 193 KSKSMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGGI 252
+ + + EQR+ LPI SV + L++ +++N GETGSGK+TQ+ Q+L G+ G +
Sbjct: 37 RRQKIIEQRKSLPIASVEKRLIEEVQKNDILIIVGETGSGKTTQIPQFLFHAGFCHDGKV 96
Query: 253 VGCTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRETL- 311
VG TQPRRVAA++VAKRV+EE ELG +VGY++RF+D T +T IKYMTDG+LLRE L
Sbjct: 97 VGITQPRRVAAITVAKRVAEECGYELGQKVGYSVRFDDSTSNSTRIKYMTDGLLLREALL 156
Query: 312 -NYSSKIQLL 320
Y SK ++
Sbjct: 157 DPYLSKYSVI 166
>Medtr1g086640.1 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr1:38781865-38776805 | 20130731
Length = 721
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 86/118 (72%), Gaps = 5/118 (4%)
Query: 199 EQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGG-----IV 253
E+R+ LP++ +E+ L+V+++NQ GETGSGK+TQ+ Q++ E ++
Sbjct: 52 EKRKTLPVWHQKEDFLKVLKDNQTLILVGETGSGKTTQIPQFVLEAVELEAPDKRKKMMI 111
Query: 254 GCTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRETL 311
CTQPRRVAAMSV++RV+EEM+ +G++VGY+IRFED + T++KY+TDG+LLRE +
Sbjct: 112 ACTQPRRVAAMSVSRRVAEEMDVSIGEEVGYSIRFEDCSSARTVLKYLTDGMLLREAM 169
>Medtr8g080240.1 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34490015-34479594 | 20130731
Length = 697
Score = 122 bits (305), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 79/108 (73%), Gaps = 4/108 (3%)
Query: 204 LPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGGIVGCTQPRRVAA 263
LPI E++++ + N GETGSGKSTQL+Q LH GY+ + TQPRRVAA
Sbjct: 4 LPIVQYEEKIIETVENNSITVIIGETGSGKSTQLSQMLHRRGYSK----IAVTQPRRVAA 59
Query: 264 MSVAKRVSEEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRETL 311
+SV++RV++E+ +LG++VGYAIRFED T NT IKY+TDGVLLRE+L
Sbjct: 60 VSVSRRVAQELGVQLGEEVGYAIRFEDRTSRNTRIKYLTDGVLLRESL 107
>Medtr8g080240.3 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34490000-34479591 | 20130731
Length = 589
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 79/108 (73%), Gaps = 4/108 (3%)
Query: 204 LPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGGIVGCTQPRRVAA 263
LPI E++++ + N GETGSGKSTQL+Q LH GY+ + TQPRRVAA
Sbjct: 4 LPIVQYEEKIIETVENNSITVIIGETGSGKSTQLSQMLHRRGYSK----IAVTQPRRVAA 59
Query: 264 MSVAKRVSEEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRETL 311
+SV++RV++E+ +LG++VGYAIRFED T NT IKY+TDGVLLRE+L
Sbjct: 60 VSVSRRVAQELGVQLGEEVGYAIRFEDRTSRNTRIKYLTDGVLLRESL 107
>Medtr8g080240.2 | pre-mRNA splicing factor ATP-dependent RNA
helicase | HC | chr8:34489993-34479594 | 20130731
Length = 647
Score = 121 bits (304), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 60/108 (55%), Positives = 79/108 (73%), Gaps = 4/108 (3%)
Query: 204 LPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGGIVGCTQPRRVAA 263
LPI E++++ + N GETGSGKSTQL+Q LH GY+ + TQPRRVAA
Sbjct: 4 LPIVQYEEKIIETVENNSITVIIGETGSGKSTQLSQMLHRRGYSK----IAVTQPRRVAA 59
Query: 264 MSVAKRVSEEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRETL 311
+SV++RV++E+ +LG++VGYAIRFED T NT IKY+TDGVLLRE+L
Sbjct: 60 VSVSRRVAQELGVQLGEEVGYAIRFEDRTSRNTRIKYLTDGVLLRESL 107
>Medtr4g023590.1 | ATP-dependent RNA helicase DHX37-like protein,
putative | HC | chr4:7996592-7989993 | 20130731
Length = 1331
Score = 113 bits (283), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/145 (40%), Positives = 84/145 (57%), Gaps = 5/145 (3%)
Query: 173 DLPKFSQHLNKREEAVSEFAKSKSMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSG 232
+LP S V + + E+R+ LPI + +E+++ I N GETG G
Sbjct: 241 NLPHVSTQRPLTTPTVVHVYRPPEVQEKRKDLPIVMMEQEIMEAINYNSSVIVCGETGCG 300
Query: 233 KSTQLAQYLHEDGY-----TVGGGIVGCTQPRRVAAMSVAKRVSEEMETELGDQVGYAIR 287
K+TQ+ Q+L+E GY GI+G TQPRRVA ++ AKRV+ E+ LG +VG+ +R
Sbjct: 301 KTTQVPQFLYEAGYGSSKFHARSGIIGVTQPRRVAVLATAKRVAYELGVRLGKEVGFQVR 360
Query: 288 FEDVTGPNTIIKYMTDGVLLRETLN 312
++ G N IK+MTDG+LLRE N
Sbjct: 361 YDKKIGENCSIKFMTDGILLREVQN 385
>Medtr3g052610.1 | Pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr3:20814127-20817509 | 20130731
Length = 715
Score = 109 bits (272), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 86/144 (59%), Gaps = 31/144 (21%)
Query: 199 EQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQ------------------- 239
E+R+ LP++ +++ LQ ++NQ GETGSGK+TQL+
Sbjct: 49 EKRKTLPVWHQKDDFLQFFKDNQILILVGETGSGKTTQLSFCNLILLTMRRRCHGTEAPD 108
Query: 240 -YLHEDGYTVGG-----------GIVGCTQPRRVAAMSVAKRVSEEMETELGDQVGYAIR 287
++H + + ++ CTQPRRVAAMSV++RV+EEM+ +G++VGY+IR
Sbjct: 109 FFMHIPQFVLEAVDLETPDKHKKMMIACTQPRRVAAMSVSRRVAEEMDVSIGEEVGYSIR 168
Query: 288 FEDVTGPNTIIKYMTDGVLLRETL 311
FED + T++K++TDG+LLRE +
Sbjct: 169 FEDCSSAKTVLKFLTDGMLLREAM 192
>Medtr8g044260.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:16995201-16976389 | 20130731
Length = 1148
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 82/142 (57%), Gaps = 3/142 (2%)
Query: 174 LPKFSQHLNKREEAVSEFAKSKSMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGK 233
L K S + + + E + K M E R+ LP F +E LLQ I NQ GETG GK
Sbjct: 219 LQKRSLRMRNMQRSWQESPEGKKMLEFRKSLPAFREKEGLLQAIARNQVIVISGETGCGK 278
Query: 234 STQLAQYLHEDGYTVGGGI---VGCTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFED 290
+TQL QY+ E G G + CTQPRR++AM+V++RVS E LG+ VG+ +R E
Sbjct: 279 TTQLPQYILESEIESGRGAFCSIICTQPRRISAMAVSERVSAERGESLGETVGFKVRLEG 338
Query: 291 VTGPNTIIKYMTDGVLLRETLN 312
+ G NT + + T G+LLR L+
Sbjct: 339 MRGKNTHLLFCTSGILLRRLLS 360
>Medtr8g041990.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr8:15840782-15843798 | 20130731
Length = 650
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 64/87 (73%)
Query: 195 KSMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGGIVG 254
+++ E+R+ LPI+ R+E LQ + ++Q GETGSGK+TQ+ QYLHE GY G ++
Sbjct: 97 EALQEERKKLPIYPFRDEFLQAVHDHQVLVIVGETGSGKTTQIPQYLHEAGYIKHGRMLA 156
Query: 255 CTQPRRVAAMSVAKRVSEEMETELGDQ 281
CTQPRRVAAMSVA RVSEEM +LG +
Sbjct: 157 CTQPRRVAAMSVAARVSEEMGVKLGHE 183
>Medtr8g106630.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Query: 174 LPKFSQHLNKREEAVSEFAKSKSMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGK 233
L + S L+ +++ E + + M E R+ LP F ++ L+V+ ENQ GETG GK
Sbjct: 243 LQRRSLQLHHQQQDWQESPEGQKMLEFRRSLPAFKEKDAFLKVVSENQVIVVSGETGCGK 302
Query: 234 STQLAQYLHEDGYTVGGGIVG---CTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFED 290
+TQL QY+ E G + CTQPRR++A+SV++RV+ E +LG+ VGY +R E
Sbjct: 303 TTQLPQYILESEIEAARGSLCNIICTQPRRISAISVSERVAAERGEKLGESVGYKVRLEG 362
Query: 291 VTGPNTIIKYMTDGVLLRETL 311
+ G +T + + T GVLLR L
Sbjct: 363 MRGRDTRLLFCTTGVLLRRLL 383
>Medtr8g106630.3 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Query: 174 LPKFSQHLNKREEAVSEFAKSKSMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGK 233
L + S L+ +++ E + + M E R+ LP F ++ L+V+ ENQ GETG GK
Sbjct: 243 LQRRSLQLHHQQQDWQESPEGQKMLEFRRSLPAFKEKDAFLKVVSENQVIVVSGETGCGK 302
Query: 234 STQLAQYLHEDGYTVGGGIVG---CTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFED 290
+TQL QY+ E G + CTQPRR++A+SV++RV+ E +LG+ VGY +R E
Sbjct: 303 TTQLPQYILESEIEAARGSLCNIICTQPRRISAISVSERVAAERGEKLGESVGYKVRLEG 362
Query: 291 VTGPNTIIKYMTDGVLLRETL 311
+ G +T + + T GVLLR L
Sbjct: 363 MRGRDTRLLFCTTGVLLRRLL 383
>Medtr8g106630.5 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Query: 174 LPKFSQHLNKREEAVSEFAKSKSMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGK 233
L + S L+ +++ E + + M E R+ LP F ++ L+V+ ENQ GETG GK
Sbjct: 243 LQRRSLQLHHQQQDWQESPEGQKMLEFRRSLPAFKEKDAFLKVVSENQVIVVSGETGCGK 302
Query: 234 STQLAQYLHEDGYTVGGGIVG---CTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFED 290
+TQL QY+ E G + CTQPRR++A+SV++RV+ E +LG+ VGY +R E
Sbjct: 303 TTQLPQYILESEIEAARGSLCNIICTQPRRISAISVSERVAAERGEKLGESVGYKVRLEG 362
Query: 291 VTGPNTIIKYMTDGVLLRETL 311
+ G +T + + T GVLLR L
Sbjct: 363 MRGRDTRLLFCTTGVLLRRLL 383
>Medtr8g106630.2 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Query: 174 LPKFSQHLNKREEAVSEFAKSKSMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGK 233
L + S L+ +++ E + + M E R+ LP F ++ L+V+ ENQ GETG GK
Sbjct: 243 LQRRSLQLHHQQQDWQESPEGQKMLEFRRSLPAFKEKDAFLKVVSENQVIVVSGETGCGK 302
Query: 234 STQLAQYLHEDGYTVGGGIVG---CTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFED 290
+TQL QY+ E G + CTQPRR++A+SV++RV+ E +LG+ VGY +R E
Sbjct: 303 TTQLPQYILESEIEAARGSLCNIICTQPRRISAISVSERVAAERGEKLGESVGYKVRLEG 362
Query: 291 VTGPNTIIKYMTDGVLLRETL 311
+ G +T + + T GVLLR L
Sbjct: 363 MRGRDTRLLFCTTGVLLRRLL 383
>Medtr8g106630.4 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr8:44998383-45010085 | 20130731
Length = 1172
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 84/141 (59%), Gaps = 3/141 (2%)
Query: 174 LPKFSQHLNKREEAVSEFAKSKSMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGK 233
L + S L+ +++ E + + M E R+ LP F ++ L+V+ ENQ GETG GK
Sbjct: 243 LQRRSLQLHHQQQDWQESPEGQKMLEFRRSLPAFKEKDAFLKVVSENQVIVVSGETGCGK 302
Query: 234 STQLAQYLHEDGYTVGGGIVG---CTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFED 290
+TQL QY+ E G + CTQPRR++A+SV++RV+ E +LG+ VGY +R E
Sbjct: 303 TTQLPQYILESEIEAARGSLCNIICTQPRRISAISVSERVAAERGEKLGESVGYKVRLEG 362
Query: 291 VTGPNTIIKYMTDGVLLRETL 311
+ G +T + + T GVLLR L
Sbjct: 363 MRGRDTRLLFCTTGVLLRRLL 383
>Medtr1g109170.2 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr1:49342716-49360401 | 20130731
Length = 1222
Score = 98.2 bits (243), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 83/139 (59%), Gaps = 3/139 (2%)
Query: 176 KFSQHLNKREEAVSEFAKSKSMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKST 235
+ S + +++A E + + M E R LP + +E +L VI +NQ GETG GK+T
Sbjct: 301 QISFQMRDQQQAWQESPEGRKMLEFRSNLPAYKEKEAILSVISKNQVVIISGETGCGKTT 360
Query: 236 QLAQYLHEDGY-TVGGGIVG--CTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVT 292
Q+ Q++ E +V G CTQPRR++AMSV++RV+ E +LG+ VGY +R E +
Sbjct: 361 QIPQFILESEIESVHGAACNIICTQPRRISAMSVSERVAFERGEKLGESVGYKVRLEGMK 420
Query: 293 GPNTIIKYMTDGVLLRETL 311
G +T + + T G+LLR L
Sbjct: 421 GKDTHLLFCTTGILLRRLL 439
>Medtr1g109170.1 | ATP-dependent RNA helicase DHX36-like protein |
HC | chr1:49342716-49360105 | 20130731
Length = 1248
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 83/139 (59%), Gaps = 3/139 (2%)
Query: 176 KFSQHLNKREEAVSEFAKSKSMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKST 235
+ S + +++A E + + M E R LP + +E +L VI +NQ GETG GK+T
Sbjct: 301 QISFQMRDQQQAWQESPEGRKMLEFRSNLPAYKEKEAILSVISKNQVVIISGETGCGKTT 360
Query: 236 QLAQYLHEDGY-TVGGGIVG--CTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVT 292
Q+ Q++ E +V G CTQPRR++AMSV++RV+ E +LG+ VGY +R E +
Sbjct: 361 QIPQFILESEIESVHGAACNIICTQPRRISAMSVSERVAFERGEKLGESVGYKVRLEGMK 420
Query: 293 GPNTIIKYMTDGVLLRETL 311
G +T + + T G+LLR L
Sbjct: 421 GKDTHLLFCTTGILLRRLL 439
>Medtr1g056490.1 | ATP-dependent RNA helicase | HC |
chr1:24729204-24739293 | 20130731
Length = 999
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/137 (40%), Positives = 76/137 (55%), Gaps = 3/137 (2%)
Query: 176 KFSQHLNKREEAVSEFAKSKSMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKST 235
K S L +R+E K M R+ LP F ++ E L+ ++ NQ GETG GK+T
Sbjct: 203 KLSVALKERQELEQASGSLKEMKSFREKLPAFKMKSEFLKAVQGNQVLVVSGETGCGKTT 262
Query: 236 QLAQYLHEDGYTVGGGI---VGCTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVT 292
QL Q++ E+ + G + CTQPRRV+A+SVA R+S E LG VGY IR E
Sbjct: 263 QLPQFILEEEISCLRGADCNIICTQPRRVSAISVAARISAERGETLGKTVGYHIRLEAKR 322
Query: 293 GPNTIIKYMTDGVLLRE 309
T + + T GVLLR+
Sbjct: 323 SAETRLLFCTTGVLLRQ 339
>Medtr4g485610.1 | pre-mRNA-splicing factor ATP-dependent RNA
helicase | HC | chr4:33389635-33387508 | 20130731
Length = 683
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 36/60 (60%), Positives = 52/60 (86%)
Query: 252 IVGCTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRETL 311
+V CTQPRRVAA+SV++RV+EEM+ +G++VGY+IRFED + T++KY+TDG+LLRE +
Sbjct: 72 MVACTQPRRVAALSVSRRVAEEMDVSIGEEVGYSIRFEDCSSSRTVLKYLTDGMLLREAM 131
>Medtr5g090430.2 | ATP-dependent RNA helicase, putative | HC |
chr5:39384456-39392519 | 20130731
Length = 1077
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 8/141 (5%)
Query: 179 QHLNKREEAVSEFAKSKSMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLA 238
+ + R E VS+ K ++ R LPI S ++ + + +Q GETG GK+TQ+
Sbjct: 52 EAVTSRRETVSDL---KVITVLRSKLPIASYKDAITSAVESHQVVLISGETGCGKTTQVP 108
Query: 239 QYLHEDGYTVGGG---IVGCTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVTGPN 295
QY+ + Y G G + CTQPRR++AMSV++R+S E G+ VGY IR + G
Sbjct: 109 QYILD--YMWGKGETCKILCTQPRRISAMSVSERISRERGEAAGENVGYKIRLDSKGGQQ 166
Query: 296 TIIKYMTDGVLLRETLNYSSK 316
+ I T GVLLR ++ S+
Sbjct: 167 SSIVLCTTGVLLRVLVSKGSR 187
>Medtr5g090430.1 | ATP-dependent RNA helicase, putative | HC |
chr5:39384456-39392519 | 20130731
Length = 1190
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 8/141 (5%)
Query: 179 QHLNKREEAVSEFAKSKSMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLA 238
+ + R E VS+ K ++ R LPI S ++ + + +Q GETG GK+TQ+
Sbjct: 165 EAVTSRRETVSDL---KVITVLRSKLPIASYKDAITSAVESHQVVLISGETGCGKTTQVP 221
Query: 239 QYLHEDGYTVGGG---IVGCTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVTGPN 295
QY+ + Y G G + CTQPRR++AMSV++R+S E G+ VGY IR + G
Sbjct: 222 QYILD--YMWGKGETCKILCTQPRRISAMSVSERISRERGEAAGENVGYKIRLDSKGGQQ 279
Query: 296 TIIKYMTDGVLLRETLNYSSK 316
+ I T GVLLR ++ S+
Sbjct: 280 SSIVLCTTGVLLRVLVSKGSR 300
>Medtr4g134790.1 | ATP-dependent RNA helicase | HC |
chr4:56529889-56495557 | 20130731
Length = 1452
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Query: 193 KSKSMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGG- 251
+ + M R LPI +++ ++LQ+++EN GETGSGK+TQ+ Q++ ++ G G
Sbjct: 594 RYQDMLNFRATLPIATLKGDILQMLKENDVLVVCGETGSGKTTQVPQFILDEMIESGHGG 653
Query: 252 --IVGCTQPRRVAAMSVAKRVSEE-METELGDQ---VGYAIRFEDVTGPNTIIKYMTDGV 305
+ CTQPRR+AA+SVA+RV++E E G +GY +R + T + + T G+
Sbjct: 654 HCNIICTQPRRIAAISVAERVADERCEPSPGSDGSLIGYQVRLDSARNEKTRLLFCTTGI 713
Query: 306 LLRETL 311
LLR+ +
Sbjct: 714 LLRKLM 719
>Medtr4g134790.2 | ATP-dependent RNA helicase | HC |
chr4:56529889-56495557 | 20130731
Length = 1449
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 76/126 (60%), Gaps = 7/126 (5%)
Query: 193 KSKSMSEQRQYLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGG- 251
+ + M R LPI +++ ++LQ+++EN GETGSGK+TQ+ Q++ ++ G G
Sbjct: 594 RYQDMLNFRATLPIATLKGDILQMLKENDVLVVCGETGSGKTTQVPQFILDEMIESGHGG 653
Query: 252 --IVGCTQPRRVAAMSVAKRVSEE-METELGDQ---VGYAIRFEDVTGPNTIIKYMTDGV 305
+ CTQPRR+AA+SVA+RV++E E G +GY +R + T + + T G+
Sbjct: 654 HCNIICTQPRRIAAISVAERVADERCEPSPGSDGSLIGYQVRLDSARNEKTRLLFCTTGI 713
Query: 306 LLRETL 311
LLR+ +
Sbjct: 714 LLRKLM 719
>Medtr3g014030.1 | helicase, IBR and zinc finger protein | HC |
chr3:3875260-3882505 | 20130731
Length = 1731
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 63/110 (57%), Gaps = 2/110 (1%)
Query: 204 LPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGGIVGCTQPRRVAA 263
LPI++ R+E+LQ I Q GETGSGKSTQL Q+L + G IV CTQPRR+AA
Sbjct: 266 LPIYAYRKEILQQIYHQQITVLIGETGSGKSTQLVQFLADSGVGANESIV-CTQPRRIAA 324
Query: 264 MSVAKRVSEEMETELGD-QVGYAIRFEDVTGPNTIIKYMTDGVLLRETLN 312
S+A+RV EE D + F ++ I +MTD LL+ ++
Sbjct: 325 KSLAERVREESGGCYEDSSIKCYSSFSSWNKFDSRIIFMTDHCLLQHYMS 374
>Medtr1g088590.1 | zinc finger CCCH domain protein | HC |
chr1:39615599-39607040 | 20130731
Length = 1022
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 203 YLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGGIVGCTQPRRVA 262
+LP+ S+R++++ I++N+ GETG GKS+Q+ Q+L E+ T + CT PRR A
Sbjct: 29 HLPVMSMRKKIIDKIQQNRVTLIIGETGCGKSSQIPQFLLEENMTP----ILCTLPRRFA 84
Query: 263 AMSVAKRVSEEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRE 309
+SVAK V++ +LG++VGY I ++ I + T GVLL E
Sbjct: 85 VVSVAKMVAKARNCQLGEEVGYHIGHSRHFSASSEIVFKTAGVLLDE 131
>Medtr3g086770.1 | helicase, IBR and zinc finger protein | HC |
chr3:39323283-39316838 | 20130731
Length = 1718
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 65/116 (56%), Gaps = 13/116 (11%)
Query: 204 LPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGGIVGCTQPRRVAA 263
LPI++ R E+LQ I Q GETGSGKSTQ+ Q+L + G IV CTQPR++AA
Sbjct: 266 LPIYAYRREILQQIHHQQITVLIGETGSGKSTQIVQFLADSGIGADETIV-CTQPRKIAA 324
Query: 264 MSVAKRVSEEME-------TELGDQVGYAIRFEDVTGPNTIIKYMTDGVLLRETLN 312
S+A+RV EE + + +F+D + I +MTD LL++ ++
Sbjct: 325 KSLAERVQEESKGCYEENSIQCYSTFSSCQKFDD-----SRIAFMTDHCLLQQYMS 375
>Medtr4g120070.1 | RNA helicase, putative | HC |
chr4:49772806-49778936 | 20130731
Length = 1256
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%)
Query: 246 YTVGGGIVGCTQPRRVAAMSVAKRVSEEMETELGDQVGYAIRFEDVTGPNTIIKYMTDGV 305
+ GI+G TQPRRVA ++ AKRV+ E+ LG +VG+ +R++ G N IK+MTDG+
Sbjct: 215 FHAHSGIIGVTQPRRVAVLATAKRVAYELGVRLGKEVGFQVRYDKKIGENCSIKFMTDGI 274
Query: 306 LL 307
LL
Sbjct: 275 LL 276
>Medtr0267s0070.1 | NB-ARC domain disease resistance protein, putative
| LC | scaffold0267:17737-24509 | 20130731
Length = 1982
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 60/114 (52%), Gaps = 9/114 (7%)
Query: 200 QRQYLPIFSVREELLQVIRENQXXXXXGETGSGKSTQLAQYLHEDGYTVGGGIVGCTQPR 259
Q + P+ S+R+ L + GETGSGKSTQL Q+L + G IV CTQPR
Sbjct: 922 QSIWSPLNSLRQLTLITV-------LIGETGSGKSTQLVQFLADSGVGANESIV-CTQPR 973
Query: 260 RVAAMSVAKRVSEEMETELGD-QVGYAIRFEDVTGPNTIIKYMTDGVLLRETLN 312
R+AA S+A+RV EE D + F ++ I +MTD LL+ ++
Sbjct: 974 RIAAKSLAERVREESGGCYEDSSIKCYSSFSSWNKFDSRIIFMTDHCLLQHYMS 1027