Miyakogusa Predicted Gene

Lj0g3v0273379.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0273379.1 Non Characterized Hit- tr|I1L3L8|I1L3L8_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,75.15,0,no
description,NULL; AAA_2,ATPase, AAA-2; ClpB_D2-small,Clp ATPase,
C-terminal; clpX: ATP-dependent ,CUFF.18118.1
         (786 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr6g059910.1 | ATP-dependent Clp protease regulatory subunit ...   877   0.0  
Medtr3g091550.1 | ATP-dependent Clp protease regulatory subunit ...   579   e-165
Medtr4g134610.1 | AAA domain, Cdc48 subfamily protein | HC | chr...   141   2e-33

>Medtr6g059910.1 | ATP-dependent Clp protease regulatory subunit
           ClpX | HC | chr6:20566263-20573202 | 20130731
          Length = 662

 Score =  877 bits (2267), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 469/652 (71%), Positives = 502/652 (76%), Gaps = 21/652 (3%)

Query: 141 KWDRGGSDDGSTHNTTRKIRAEANCPRCTKDMNLIFSNRHFPATSDSDCXXXXXXXXXXX 200
           KW RGGSD G   N TRKIRAEANCPRC+KDMNL FSNRH  +                 
Sbjct: 14  KWGRGGSD-GDMQNPTRKIRAEANCPRCSKDMNLFFSNRHMQSNGGD---SGGGNGENLG 69

Query: 201 XXXXXXYQAVNLCPSCNTAYYFRPNNTTPLQGTFVEIGRVSTNNGSYNSVIGNPNXXXXX 260
                 YQAVNLCP+C TAY+FRP NT+PLQGTFVEIGRVS NNG  +            
Sbjct: 70  SNGDGGYQAVNLCPNCKTAYHFRPYNTSPLQGTFVEIGRVSNNNGGSSKT-------QLS 122

Query: 261 XXXXXXXXXXXXXXXXXXHVGEDAGLRGLASNWLEVSFWDTLKNGGANGNHXXXXXXXXX 320
                             H  ED GL G ASNWLEVS W+TL+N      +         
Sbjct: 123 RRFKNGIGKDSNSIKSGHHGSEDLGLNGSASNWLEVSMWETLRNYNGGSGNAAGGGNNGE 182

Query: 321 XXXX------XKNGNGLAVHTPPGPPFAPDINVIRAXXXXXXXXXXXXXXXXXXXXXXXS 374
                       NGNGLAVHTPPGPPFAP +NVIRA                       S
Sbjct: 183 PPETWPLPVGGGNGNGLAVHTPPGPPFAPGLNVIRARGPQEGGPGGGGNGEKNTWGG--S 240

Query: 375 NLGKDLPSPKEICKGLDKFVIGQDRAKKVLSVAVYNHYKRIYHATLPKGSVADAGTSQAL 434
           NLGKDLPSPKEICKGLDKFVIGQ RAKKVLSVAVYNHYKRIYHATLPKGS AD+G S  L
Sbjct: 241 NLGKDLPSPKEICKGLDKFVIGQGRAKKVLSVAVYNHYKRIYHATLPKGSGADSGISGIL 300

Query: 435 DDDENVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESIL 494
           DDDENVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESIL
Sbjct: 301 DDDENVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESIL 360

Query: 495 HKLLXXXXXXXXXXQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV 554
           +KLL          QQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV
Sbjct: 361 YKLLAAADYNVAAAQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNV 420

Query: 555 PEKGARKHPRGENIQMDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRTGRI 614
           PEKGARK+PRG+NIQ+DTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRAN+R+GRI
Sbjct: 421 PEKGARKNPRGDNIQIDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANIRSGRI 480

Query: 615 VDSAVTSSLLETVESADLIAYGLIPEFIGRFPILVSLSALTEDQLMQVLTEPKNALGKQY 674
           +DSAV SSLLE+VES+DLIAYGLIPEFIGRFPILVSLSALTE+QLMQVLTEPK+ALGKQY
Sbjct: 481 IDSAVASSLLESVESSDLIAYGLIPEFIGRFPILVSLSALTEEQLMQVLTEPKHALGKQY 540

Query: 675 KKLFSMNNVKLHFTEKALRLIAEKAMAKNTGARGLRALIESILTESMFEIPDIKTGSDRV 734
           KKL  MN VKLHFT+KALR+IA+KAMAKNTGARGLRALIE+ILT++M+EIPDIKTGSDR+
Sbjct: 541 KKLVGMNEVKLHFTDKALRMIAKKAMAKNTGARGLRALIENILTDAMYEIPDIKTGSDRI 600

Query: 735 DAVVVDEESVGSLNAPGCGGKILRGDGALEQYLAKMKDSVVNVDVAESDSQE 786
           DAVVVDEESVGSL APGCGGKILRGDGALEQYLAK+KDS     VAES+ Q+
Sbjct: 601 DAVVVDEESVGSLTAPGCGGKILRGDGALEQYLAKIKDS--EDVVAESELQD 650


>Medtr3g091550.1 | ATP-dependent Clp protease regulatory subunit
           ClpX | HC | chr3:41648807-41642783 | 20130731
          Length = 581

 Score =  579 bits (1492), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 308/414 (74%), Positives = 348/414 (84%), Gaps = 3/414 (0%)

Query: 374 SNLGKDLPSPKEICKGLDKFVIGQDRAKKVLSVAVYNHYKRIYHATLPKG--SVADAGTS 431
           SN+G   P+PKEICKGLDK VIGQ+RAKKVLSVAVYNHYKRIYH  L     S  D    
Sbjct: 157 SNMGGTFPTPKEICKGLDKHVIGQERAKKVLSVAVYNHYKRIYHEKLWHAGDSNIDGKAD 216

Query: 432 QALDDDENVELEKSNVLLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVE 491
             +DDD++VELEKSN+LLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVE
Sbjct: 217 VVVDDDDDVELEKSNILLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVE 276

Query: 492 SILHKLLXXXXXXXXXXQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 551
           SIL+KLL          QQGI+YIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI
Sbjct: 277 SILYKLLAAADYNVAAAQQGIVYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTI 336

Query: 552 VNVPEKGARKHPRGENIQMDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRANMRT 611
           VNVPEKGARKHPRG+NIQ+DTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRA M+ 
Sbjct: 337 VNVPEKGARKHPRGDNIQIDTKNILFICGGAFIDLEKTISERRQDSSIGFGAPVRAKMKA 396

Query: 612 GRIVDSAVTSSLLETVESADLIAYGLIPEFIGRFPILVSLSALTEDQLMQVLTEPKNALG 671
           G + ++++ SSLL TVES+DLIAYGLIPEF+GRFPILVSLSALTE+QL+QVLTEPK+AL 
Sbjct: 397 GSVTEASIASSLLGTVESSDLIAYGLIPEFVGRFPILVSLSALTENQLIQVLTEPKSALE 456

Query: 672 KQYKKLFSMNNVKLHFTEKALRLIAEKAMAKNTGARGLRALIESILTESMFEIPDIKTGS 731
           KQYKK F +N VKLHFTE A + IA +AM+KNTGARGLRA+IESIL ++M+EIPDI+TG 
Sbjct: 457 KQYKKTFQINGVKLHFTESARKSIARQAMSKNTGARGLRAIIESILVDAMYEIPDIRTGD 516

Query: 732 DRVDAVVVDEESVGSLNAPGCGGKILRGDGALEQYLAKMKDSVVNVDVAESDSQ 785
           D +DAVVVDE+SVG       G KIL G GA ++YL+K K+     +V+  D +
Sbjct: 517 DVIDAVVVDEDSVGG-EGSVRGAKILYGRGAFDRYLSKEKNDSETTEVSGGDQE 569


>Medtr4g134610.1 | AAA domain, Cdc48 subfamily protein | HC |
           chr4:56399353-56401236 | 20130731
          Length = 225

 Score =  141 bits (356), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 73/110 (66%), Positives = 84/110 (76%), Gaps = 3/110 (2%)

Query: 448 LLMGPTGSGKTLLAKTLARFVNVPFVIADATTLTQAGYVGEDVESILHKLLXXXXXXXXX 507
           LL+GPT SGKTLL KTLAR VNVPF +AD+TT TQAGYVG+DV SIL+ LL         
Sbjct: 74  LLIGPTDSGKTLLPKTLARIVNVPFTMADSTTFTQAGYVGQDVHSILYNLLQEADFDVEL 133

Query: 508 XQQGIIYIDEVDKITKKAESLNISRDVSGEGVQQALLKMLEGTIVNVPEK 557
            Q GI+YIDE+DKIT K+ES++  RDVSGEGVQ ALLKMLE TI   P+K
Sbjct: 134 AQPGIVYIDEIDKITNKSESISGGRDVSGEGVQHALLKMLESTI---PDK 180