Miyakogusa Predicted Gene

Lj0g3v0273249.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0273249.1 Non Characterized Hit- tr|I1MMQ7|I1MMQ7_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.9693
PE=,90.48,1e-16,ACTIN-RELATED PROTEIN,NULL;
ACTIN,Actin-like,gene.Ljchr0_pseudomol_20120828.path1.gene28025.1
         (61 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g070520.3 | macronuclear actin | HC | chr8:29967945-299622...    82   1e-16
Medtr8g070520.4 | macronuclear actin | HC | chr8:29967945-299622...    82   1e-16
Medtr8g070520.2 | macronuclear actin | HC | chr8:29967945-299622...    82   1e-16
Medtr8g070520.1 | macronuclear actin | HC | chr8:29967945-299622...    82   1e-16
Medtr3g010170.1 | macronuclear actin | HC | chr3:2312481-2319318...    76   9e-15

>Medtr8g070520.3 | macronuclear actin | HC | chr8:29967945-29962242
           | 20130731
          Length = 459

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/42 (85%), Positives = 40/42 (95%)

Query: 1   MSLHQAIALCMDHCYSAELAGNNDWFKTIVLSGGTACLPGLA 42
           MSLH AIALCMDHC+SAELAG +DWFKT+VLSGG+ACLPGLA
Sbjct: 371 MSLHHAIALCMDHCHSAELAGGSDWFKTVVLSGGSACLPGLA 412


>Medtr8g070520.4 | macronuclear actin | HC | chr8:29967945-29962242
           | 20130731
          Length = 459

 Score = 82.0 bits (201), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/42 (85%), Positives = 40/42 (95%)

Query: 1   MSLHQAIALCMDHCYSAELAGNNDWFKTIVLSGGTACLPGLA 42
           MSLH AIALCMDHC+SAELAG +DWFKT+VLSGG+ACLPGLA
Sbjct: 371 MSLHHAIALCMDHCHSAELAGGSDWFKTVVLSGGSACLPGLA 412


>Medtr8g070520.2 | macronuclear actin | HC | chr8:29967945-29962242
           | 20130731
          Length = 477

 Score = 81.6 bits (200), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/42 (85%), Positives = 40/42 (95%)

Query: 1   MSLHQAIALCMDHCYSAELAGNNDWFKTIVLSGGTACLPGLA 42
           MSLH AIALCMDHC+SAELAG +DWFKT+VLSGG+ACLPGLA
Sbjct: 371 MSLHHAIALCMDHCHSAELAGGSDWFKTVVLSGGSACLPGLA 412


>Medtr8g070520.1 | macronuclear actin | HC | chr8:29967945-29962242
           | 20130731
          Length = 477

 Score = 81.6 bits (200), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 36/42 (85%), Positives = 40/42 (95%)

Query: 1   MSLHQAIALCMDHCYSAELAGNNDWFKTIVLSGGTACLPGLA 42
           MSLH AIALCMDHC+SAELAG +DWFKT+VLSGG+ACLPGLA
Sbjct: 371 MSLHHAIALCMDHCHSAELAGGSDWFKTVVLSGGSACLPGLA 412


>Medtr3g010170.1 | macronuclear actin | HC | chr3:2312481-2319318 |
           20130731
          Length = 471

 Score = 75.9 bits (185), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 31/42 (73%), Positives = 37/42 (88%)

Query: 1   MSLHQAIALCMDHCYSAELAGNNDWFKTIVLSGGTACLPGLA 42
           M LH AIA CM++C+SA L G+NDW+KT+VLSGGTACLPGLA
Sbjct: 365 MGLHHAIARCMENCHSAGLPGDNDWYKTVVLSGGTACLPGLA 406