Miyakogusa Predicted Gene
- Lj0g3v0272739.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0272739.1 tr|F2DD43|F2DD43_HORVD Predicted protein
(Fragment) OS=Hordeum vulgare var. distichum PE=2
SV=1,34.42,1e-18,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
seg,NULL,CUFF.18037.1
(261 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr8g075350.1 | senescence/dehydration-associated-like protein... 323 1e-88
Medtr5g022450.1 | senescence/dehydration-associated-like protein... 281 3e-76
Medtr5g022450.2 | senescence/dehydration-associated-like protein... 281 4e-76
Medtr4g073530.1 | senescence/dehydration-associated-like protein... 159 3e-39
Medtr4g073530.2 | senescence/dehydration-associated-like protein... 159 4e-39
Medtr8g102510.2 | senescence/dehydration-associated-like protein... 61 9e-10
Medtr8g102510.1 | senescence/dehydration-associated-like protein... 61 1e-09
Medtr8g102510.3 | senescence/dehydration-associated-like protein... 61 1e-09
Medtr6g088680.2 | senescence/dehydration-associated-like protein... 60 2e-09
Medtr6g088680.1 | senescence/dehydration-associated-like protein... 60 2e-09
Medtr6g088685.1 | senescence/dehydration-associated-like protein... 57 1e-08
>Medtr8g075350.1 | senescence/dehydration-associated-like protein |
HC | chr8:31871181-31867632 | 20130731
Length = 477
Score = 323 bits (827), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 167/269 (62%), Positives = 190/269 (70%), Gaps = 9/269 (3%)
Query: 1 MASENPNQKNSLYPEVITDDP--------NPNNPTSSSLYPSIDVSELVENLFPEDTSPS 52
M S+NPN KNSLYP++I +P NPN TSSSLYPSI+VS+LVE+LF E+T+PS
Sbjct: 10 MDSQNPNNKNSLYPQIIDSNPEASSPFISNPNTTTSSSLYPSIEVSDLVEDLFHENTAPS 69
Query: 53 APPIAAEDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQWPL 112
AP IAAED+LIK+PGAILHLID++YS ELA DLTII LRQG N VA+YARV +EIQWPL
Sbjct: 70 APQIAAEDILIKIPGAILHLIDQQYSFELAISDLTIIRLRQGNNTVAVYARVGNEIQWPL 129
Query: 113 AKDETAVKVDDSHYFFSFRVPKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVMLS 172
AKDE AVKVD+SHYFF FRVPK + +LS
Sbjct: 130 AKDEAAVKVDESHYFFCFRVPK-EKNDSDSDSSDEEKEKSKLSFRRKGRRKEEDNSDLLS 188
Query: 173 YGLTIAAKGQEGLLKELDRVLLECSNFSVHEVSEKAKKKGEALDGSVAMEMTPXXXXXXX 232
YGLTIA+KGQE L+KELD VL ECSNFSV EVSEKAKKKGEALDGS+AME++P
Sbjct: 189 YGLTIASKGQEDLVKELDEVLKECSNFSVQEVSEKAKKKGEALDGSLAMEISPADLDNVK 248
Query: 233 XXXXXXXXRCAAYWTTLAPNVEDYSGLAA 261
RCAAYWTTLAPNVEDYSG AA
Sbjct: 249 EKKELMEERCAAYWTTLAPNVEDYSGTAA 277
>Medtr5g022450.1 | senescence/dehydration-associated-like protein |
HC | chr5:8850707-8856565 | 20130731
Length = 460
Score = 281 bits (720), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 150/271 (55%), Positives = 180/271 (66%), Gaps = 26/271 (9%)
Query: 1 MASENPNQKNSLYPEVITDDPNPNNPTSSSLYPSID--VSELVENLFPEDT--------S 50
MA++NPNQ+NSLYP+VI+ P + S+LYPSID +LVENLFP+ T S
Sbjct: 1 MATQNPNQRNSLYPQVISSIPTAPPSSQSNLYPSIDHDFDDLVENLFPDTTTTAGVNTTS 60
Query: 51 PSAPPIAAEDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQW 110
PSAPP E +LIK+PGAIL+LID++YSVELA GD T++ LRQG+N +A+YAR+ DEIQW
Sbjct: 61 PSAPPETTEQILIKIPGAILNLIDQQYSVELASGDFTVVRLRQGENSIAVYARIADEIQW 120
Query: 111 PLAKDETAVKVDDSHYFFSFRVPKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVM 170
PLAKDETAVKVDDSHYFFSF PK +
Sbjct: 121 PLAKDETAVKVDDSHYFFSFSAPKGYDSDEDEADRSKNSKTESD---------------L 165
Query: 171 LSYGLTIAAKGQEGLLKELDRVLLECSNFSVHEVSEKAKKKGEALDGSVAMEMTPXXXXX 230
LSYGLTIA+KGQE LLKELD +L CSNFSV +VSEKA KKGE LDG++A E++P
Sbjct: 166 LSYGLTIASKGQEHLLKELDVILENCSNFSVQKVSEKA-KKGEVLDGNLAKEVSPKDLES 224
Query: 231 XXXXXXXXXXRCAAYWTTLAPNVEDYSGLAA 261
+CAAYWTTLAPNVE+YSG AA
Sbjct: 225 SKKKKEMMEGQCAAYWTTLAPNVEEYSGTAA 255
>Medtr5g022450.2 | senescence/dehydration-associated-like protein |
HC | chr5:8850707-8856565 | 20130731
Length = 454
Score = 281 bits (719), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 150/271 (55%), Positives = 180/271 (66%), Gaps = 26/271 (9%)
Query: 1 MASENPNQKNSLYPEVITDDPNPNNPTSSSLYPSID--VSELVENLFPEDT--------S 50
MA++NPNQ+NSLYP+VI+ P + S+LYPSID +LVENLFP+ T S
Sbjct: 1 MATQNPNQRNSLYPQVISSIPTAPPSSQSNLYPSIDHDFDDLVENLFPDTTTTAGVNTTS 60
Query: 51 PSAPPIAAEDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQW 110
PSAPP E +LIK+PGAIL+LID++YSVELA GD T++ LRQG+N +A+YAR+ DEIQW
Sbjct: 61 PSAPPETTEQILIKIPGAILNLIDQQYSVELASGDFTVVRLRQGENSIAVYARIADEIQW 120
Query: 111 PLAKDETAVKVDDSHYFFSFRVPKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVM 170
PLAKDETAVKVDDSHYFFSF PK +
Sbjct: 121 PLAKDETAVKVDDSHYFFSFSAPKGYDSDEDEADRSKNSKTESD---------------L 165
Query: 171 LSYGLTIAAKGQEGLLKELDRVLLECSNFSVHEVSEKAKKKGEALDGSVAMEMTPXXXXX 230
LSYGLTIA+KGQE LLKELD +L CSNFSV +VSEKA KKGE LDG++A E++P
Sbjct: 166 LSYGLTIASKGQEHLLKELDVILENCSNFSVQKVSEKA-KKGEVLDGNLAKEVSPKDLES 224
Query: 231 XXXXXXXXXXRCAAYWTTLAPNVEDYSGLAA 261
+CAAYWTTLAPNVE+YSG AA
Sbjct: 225 SKKKKEMMEGQCAAYWTTLAPNVEEYSGTAA 255
>Medtr4g073530.1 | senescence/dehydration-associated-like protein |
HC | chr4:27879029-27877517 | 20130731
Length = 404
Score = 159 bits (401), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 143/257 (55%), Gaps = 59/257 (22%)
Query: 7 NQKNSLYPEVITDDPNPNNPTSS-----SLYPSIDVSELVENLFPEDTSPSAPPIAAEDV 61
+QK S YP+V + +P+ N+P S ++YPSI + L ++T+ + A+E V
Sbjct: 2 SQKTSFYPQVESTNPDANSPFSHSSSSSTMYPSITTNNLSSEY--QNTTQTQ---ASEHV 56
Query: 62 LIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQWPLAKDETAVKV 121
L+ VP ILHLI+K+ SV LA GDLTI+ L++ + VVA+ AR+ D+IQWPLAKD + VK+
Sbjct: 57 LVTVPNVILHLIEKDSSVHLASGDLTIVSLKEEEKVVAVLARIGDQIQWPLAKDVSTVKL 116
Query: 122 DDSHYFFSFRVPKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVMLSYGLTIAAKG 181
D+SHYFF+ ++P+ D +L+YGLT+AAKG
Sbjct: 117 DESHYFFTLKLPQS-------------------------------DDEVLNYGLTVAAKG 145
Query: 182 QEGLLKELDRVLLECSNFSVHEVSEKAKKKGEALDGSVAMEMTPXXXXXXXXXXXXXXXR 241
+ +LK+LD VL + S SV +V K K E L+ +E
Sbjct: 146 SKKVLKKLDEVLEKYSLLSVEKV--KGVKGWEVLEKKEDVE----------------ENS 187
Query: 242 CAAYWTTLAPNVEDYSG 258
AAYWTTLAPNVEDYSG
Sbjct: 188 AAAYWTTLAPNVEDYSG 204
>Medtr4g073530.2 | senescence/dehydration-associated-like protein |
HC | chr4:27879062-27877766 | 20130731
Length = 349
Score = 159 bits (401), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 144/260 (55%), Gaps = 59/260 (22%)
Query: 4 ENPNQKNSLYPEVITDDPNPNNPTSS-----SLYPSIDVSELVENLFPEDTSPSAPPIAA 58
+ +QK S YP+V + +P+ N+P S ++YPSI + L ++T+ + A+
Sbjct: 2 QTMSQKTSFYPQVESTNPDANSPFSHSSSSSTMYPSITTNNLSSEY--QNTTQTQ---AS 56
Query: 59 EDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQWPLAKDETA 118
E VL+ VP ILHLI+K+ SV LA GDLTI+ L++ + VVA+ AR+ D+IQWPLAKD +
Sbjct: 57 EHVLVTVPNVILHLIEKDSSVHLASGDLTIVSLKEEEKVVAVLARIGDQIQWPLAKDVST 116
Query: 119 VKVDDSHYFFSFRVPKEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLVMLSYGLTIA 178
VK+D+SHYFF+ ++P+ D +L+YGLT+A
Sbjct: 117 VKLDESHYFFTLKLPQS-------------------------------DDEVLNYGLTVA 145
Query: 179 AKGQEGLLKELDRVLLECSNFSVHEVSEKAKKKGEALDGSVAMEMTPXXXXXXXXXXXXX 238
AKG + +LK+LD VL + S SV +V K K E L+ +E
Sbjct: 146 AKGSKKVLKKLDEVLEKYSLLSVEKV--KGVKGWEVLEKKEDVE---------------- 187
Query: 239 XXRCAAYWTTLAPNVEDYSG 258
AAYWTTLAPNVEDYSG
Sbjct: 188 ENSAAAYWTTLAPNVEDYSG 207
>Medtr8g102510.2 | senescence/dehydration-associated-like protein |
HC | chr8:43159649-43161393 | 20130731
Length = 321
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 59 EDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQWPLAKDETA 118
++VLI++P +HL+D+ + ELA G +I + +A +V++++QWPL KDE
Sbjct: 35 QEVLIQIPRCKVHLMDEGEAFELAQGHFMVIKTLEENVSLATVIKVEEDLQWPLTKDEPV 94
Query: 119 VKVDDSHYFFSFRV 132
VK+D HY FS V
Sbjct: 95 VKLDALHYLFSLPV 108
>Medtr8g102510.1 | senescence/dehydration-associated-like protein |
HC | chr8:43159649-43161852 | 20130731
Length = 375
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 59 EDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQWPLAKDETA 118
++VLI++P +HL+D+ + ELA G +I + +A +V++++QWPL KDE
Sbjct: 35 QEVLIQIPRCKVHLMDEGEAFELAQGHFMVIKTLEENVSLATVIKVEEDLQWPLTKDEPV 94
Query: 119 VKVDDSHYFFSFRV 132
VK+D HY FS V
Sbjct: 95 VKLDALHYLFSLPV 108
>Medtr8g102510.3 | senescence/dehydration-associated-like protein |
HC | chr8:43159649-43161021 | 20130731
Length = 294
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%)
Query: 59 EDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQWPLAKDETA 118
++VLI++P +HL+D+ + ELA G +I + +A +V++++QWPL KDE
Sbjct: 35 QEVLIQIPRCKVHLMDEGEAFELAQGHFMVIKTLEENVSLATVIKVEEDLQWPLTKDEPV 94
Query: 119 VKVDDSHYFFSFRV 132
VK+D HY FS V
Sbjct: 95 VKLDALHYLFSLPV 108
>Medtr6g088680.2 | senescence/dehydration-associated-like protein |
HC | chr6:33818763-33815362 | 20130731
Length = 295
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 50 SPSAPPIAAEDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQ 109
S + P +++LI++PG ++L+D+ + EL G II + +A ++ + +Q
Sbjct: 23 SSTKPKTLRQEILIQIPGCRVYLMDEGEAHELTQGQFMIIKIVDENVSLATIIKIGNNVQ 82
Query: 110 WPLAKDETAVKVDDSHYFFSFRV 132
+PL KDE VKVD HY FS V
Sbjct: 83 FPLTKDEPVVKVDSLHYLFSLPV 105
>Medtr6g088680.1 | senescence/dehydration-associated-like protein |
HC | chr6:33818763-33815362 | 20130731
Length = 374
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%)
Query: 50 SPSAPPIAAEDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEIQ 109
S + P +++LI++PG ++L+D+ + EL G II + +A ++ + +Q
Sbjct: 23 SSTKPKTLRQEILIQIPGCRVYLMDEGEAHELTQGQFMIIKIVDENVSLATIIKIGNNVQ 82
Query: 110 WPLAKDETAVKVDDSHYFFSFRV 132
+PL KDE VKVD HY FS V
Sbjct: 83 FPLTKDEPVVKVDSLHYLFSLPV 105
>Medtr6g088685.1 | senescence/dehydration-associated-like protein,
putative | LC | chr6:33823960-33822045 | 20130731
Length = 218
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 49 TSPSAPPIAAEDVLIKVPGAILHLIDKEYSVELACGDLTIICLRQGKNVVAIYARVDDEI 108
T P I E++LI++P ++L ++E + EL+ G TII + +A ++ + +
Sbjct: 18 TKPKTTHIQ-EEILIQIPECKVYLKNEEEAHELSQGQFTIIKIVNENVSLATIIKIGNNV 76
Query: 109 QWPLAKDETAVKVDDSHYFFSFRV 132
Q+PL KDE VKVD HY FS V
Sbjct: 77 QFPLTKDEPIVKVDSLHYLFSLPV 100