Miyakogusa Predicted Gene
- Lj0g3v0271889.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0271889.1 tr|A9SGP8|A9SGP8_PHYPA Predicted protein
OS=Physcomitrella patens subsp. patens
GN=PHYPADRAFT_164794,37.65,0.000000000000003,seg,NULL,CUFF.17978.1
(137 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr3g091770.1 | transmembrane protein, putative | HC | chr3:41... 118 2e-27
Medtr3g091770.2 | transmembrane protein, putative | HC | chr3:41... 118 2e-27
Medtr3g091770.3 | transmembrane protein, putative | HC | chr3:41... 118 2e-27
Medtr1g007840.1 | transmembrane protein, putative | HC | chr1:58... 86 1e-17
Medtr1g007840.2 | transmembrane protein, putative | HC | chr1:58... 86 1e-17
Medtr7g117715.1 | transmembrane protein, putative | HC | chr7:48... 68 2e-12
Medtr8g027430.1 | transmembrane protein, putative | HC | chr8:97... 58 3e-09
>Medtr3g091770.1 | transmembrane protein, putative | HC |
chr3:41778284-41773956 | 20130731
Length = 416
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
Query: 1 MAELLEALCHSQTXXXXXXXXXXXXYNEKEHILSLFFRQASQLFAYKQWFHXXXXXXXXX 60
+ ELLEALCHSQT YNEKEHILSLFF+QASQLFAYKQW++
Sbjct: 287 ITELLEALCHSQTRAREAEKAAQEAYNEKEHILSLFFKQASQLFAYKQWYYMLQLENLCL 346
Query: 61 XXRNKNQPLLSLFPSALHRVPSRGTLHKKSPGKGGKRKNCNRRCGIQNCIVAFAVXXXXX 120
RNKNQPLL+LFP HR R L KK+ K KRK NR+CGI C+VAFAV
Sbjct: 347 QLRNKNQPLLNLFP---HR---RMQL-KKNRNKAEKRKINNRKCGIGKCVVAFAVGLSLA 399
Query: 121 XXXXXXXXXXXXMFPTL 137
MFP++
Sbjct: 400 GAGLLLGWTMGWMFPSM 416
>Medtr3g091770.2 | transmembrane protein, putative | HC |
chr3:41778296-41773956 | 20130731
Length = 416
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
Query: 1 MAELLEALCHSQTXXXXXXXXXXXXYNEKEHILSLFFRQASQLFAYKQWFHXXXXXXXXX 60
+ ELLEALCHSQT YNEKEHILSLFF+QASQLFAYKQW++
Sbjct: 287 ITELLEALCHSQTRAREAEKAAQEAYNEKEHILSLFFKQASQLFAYKQWYYMLQLENLCL 346
Query: 61 XXRNKNQPLLSLFPSALHRVPSRGTLHKKSPGKGGKRKNCNRRCGIQNCIVAFAVXXXXX 120
RNKNQPLL+LFP HR R L KK+ K KRK NR+CGI C+VAFAV
Sbjct: 347 QLRNKNQPLLNLFP---HR---RMQL-KKNRNKAEKRKINNRKCGIGKCVVAFAVGLSLA 399
Query: 121 XXXXXXXXXXXXMFPTL 137
MFP++
Sbjct: 400 GAGLLLGWTMGWMFPSM 416
>Medtr3g091770.3 | transmembrane protein, putative | HC |
chr3:41778274-41773956 | 20130731
Length = 416
Score = 118 bits (296), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 69/137 (50%), Positives = 79/137 (57%), Gaps = 7/137 (5%)
Query: 1 MAELLEALCHSQTXXXXXXXXXXXXYNEKEHILSLFFRQASQLFAYKQWFHXXXXXXXXX 60
+ ELLEALCHSQT YNEKEHILSLFF+QASQLFAYKQW++
Sbjct: 287 ITELLEALCHSQTRAREAEKAAQEAYNEKEHILSLFFKQASQLFAYKQWYYMLQLENLCL 346
Query: 61 XXRNKNQPLLSLFPSALHRVPSRGTLHKKSPGKGGKRKNCNRRCGIQNCIVAFAVXXXXX 120
RNKNQPLL+LFP HR R L KK+ K KRK NR+CGI C+VAFAV
Sbjct: 347 QLRNKNQPLLNLFP---HR---RMQL-KKNRNKAEKRKINNRKCGIGKCVVAFAVGLSLA 399
Query: 121 XXXXXXXXXXXXMFPTL 137
MFP++
Sbjct: 400 GAGLLLGWTMGWMFPSM 416
>Medtr1g007840.1 | transmembrane protein, putative | HC |
chr1:589317-592263 | 20130731
Length = 421
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 68/137 (49%), Gaps = 13/137 (9%)
Query: 2 AELLEALCHSQTXXXXXXXXXXXXYNEKEHILSLFFRQASQLFAYKQWFHXXXXXXXXXX 61
AELL+ALC SQT +EKEHILSLFF+QASQLFAYKQW H
Sbjct: 297 AELLKALCRSQTRAREAEKAAQEACDEKEHILSLFFKQASQLFAYKQWLHVLQLENLCLQ 356
Query: 62 XRNKNQPLL-SLFPSALHRVPSRGTLHKKSPGKGGKRKNCNRRCGIQNCIVAFAVXXXXX 120
++KNQPLL +LF P G H+K +RK N R GI CI AFAV
Sbjct: 357 YKSKNQPLLNNLF-------PYEGKKHRK-----NRRKVKNSRRGIGKCIFAFAVGLALA 404
Query: 121 XXXXXXXXXXXXMFPTL 137
MFP+
Sbjct: 405 GAGLLLGWTIGCMFPSF 421
>Medtr1g007840.2 | transmembrane protein, putative | HC |
chr1:589371-592263 | 20130731
Length = 421
Score = 85.5 bits (210), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 68/137 (49%), Gaps = 13/137 (9%)
Query: 2 AELLEALCHSQTXXXXXXXXXXXXYNEKEHILSLFFRQASQLFAYKQWFHXXXXXXXXXX 61
AELL+ALC SQT +EKEHILSLFF+QASQLFAYKQW H
Sbjct: 297 AELLKALCRSQTRAREAEKAAQEACDEKEHILSLFFKQASQLFAYKQWLHVLQLENLCLQ 356
Query: 62 XRNKNQPLL-SLFPSALHRVPSRGTLHKKSPGKGGKRKNCNRRCGIQNCIVAFAVXXXXX 120
++KNQPLL +LF P G H+K +RK N R GI CI AFAV
Sbjct: 357 YKSKNQPLLNNLF-------PYEGKKHRK-----NRRKVKNSRRGIGKCIFAFAVGLALA 404
Query: 121 XXXXXXXXXXXXMFPTL 137
MFP+
Sbjct: 405 GAGLLLGWTIGCMFPSF 421
>Medtr7g117715.1 | transmembrane protein, putative | HC |
chr7:48879055-48876354 | 20130731
Length = 426
Score = 68.2 bits (165), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 56/119 (47%), Gaps = 7/119 (5%)
Query: 2 AELLEALCHSQTXXXXXXXXXXXXYNEKEHILSLFFRQASQLFAYKQWFHXXXXXXXXXX 61
A+LLEALCHSQT Y E+EHIL+L F+QASQLFAYKQ
Sbjct: 288 AQLLEALCHSQTRAREAEEAAKQAYAEREHILTLIFKQASQLFAYKQLIKLLQLETLCNQ 347
Query: 62 XRNKNQPLLSLFPSAL-----HRVPSRGTLHKKSPGKGGKRKNCNRRCGIQNCIVAFAV 115
+N + +LFP L R SR K++ G + + C I VA A+
Sbjct: 348 IKNNDLSTSTLFPVDLPWMSYERRKSRK--RKQTYSNGRREREGKSNCDITTYAVAIAL 404
>Medtr8g027430.1 | transmembrane protein, putative | HC |
chr8:9713276-9715847 | 20130731
Length = 372
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 32/47 (68%)
Query: 3 ELLEALCHSQTXXXXXXXXXXXXYNEKEHILSLFFRQASQLFAYKQW 49
+L+EALCHSQT Y +KE I++LFF QASQL+AYKQW
Sbjct: 240 QLMEALCHSQTRAREAEELAKQAYADKERIIALFFIQASQLYAYKQW 286