Miyakogusa Predicted Gene

Lj0g3v0271849.3
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0271849.3 CUFF.18097.3
         (407 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g076340.1 | uroporphyrinogen decarboxylase | HC | chr2:319...   706   0.0  
Medtr3g072330.1 | uroporphyrinogen decarboxylase | HC | chr3:324...   394   e-109

>Medtr2g076340.1 | uroporphyrinogen decarboxylase | HC |
           chr2:31981646-31987745 | 20130731
          Length = 407

 Score =  706 bits (1821), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 351/405 (86%), Positives = 367/405 (90%), Gaps = 7/405 (1%)

Query: 1   MATSINSCGLGWKSSSLFAHSTSTGFNLISPSFKPKP---KFSLTCXXXXXXX-DPLLVK 56
           + TSINS GLGWKSS LF  S    FNL+S  FKPKP   KF+LTC        DPLLVK
Sbjct: 4   IPTSINS-GLGWKSSPLFQQSNC--FNLLSSPFKPKPSLTKFTLTCSAASSSSSDPLLVK 60

Query: 57  AARGDPVSRPPAWMMRQAGRYMAVYRKLAEKHPSFRERSETTDLIVEISLQPWKAFRPDG 116
           AARGDPVSRPPAWMMRQAGRYMA+YRKLAEKHPSFRERSETTDLIVEISLQPWKAFRPDG
Sbjct: 61  AARGDPVSRPPAWMMRQAGRYMAIYRKLAEKHPSFRERSETTDLIVEISLQPWKAFRPDG 120

Query: 117 VIIFSDILTPLPAFGIEFDIEDVRGPVIQSPIRSEEGLKALHSIDLDRLRFVGDSLKLLR 176
           VIIFSDILTPLPAFGI+FDIEDVRGPVIQSPIRSEEGLK LH ID D+LRFVG+SLK+L+
Sbjct: 121 VIIFSDILTPLPAFGIDFDIEDVRGPVIQSPIRSEEGLKVLHPIDFDKLRFVGESLKILQ 180

Query: 177 QEAGGHAAVLGFVGAPWTLATYIVEGGTTRTYTTIKSMCHTAPDILRTLLSHLSQAIADY 236
           QE GG AAVLGFVGAPWTLATYIVEGGTTRTYT IKSMCHTAP ILRTLLSHLS+AIADY
Sbjct: 181 QEVGGDAAVLGFVGAPWTLATYIVEGGTTRTYTNIKSMCHTAPHILRTLLSHLSKAIADY 240

Query: 237 IVFQVESGAHCIQIFDSWGGQLPPSMWESWSKPYITEIVKVVKKKCPETPIVLYINGNGG 296
           IVFQVESGAHCIQIFDSWGGQLPP MWE WSKPYI EIV +VKKKCP+TP+VLYINGNGG
Sbjct: 241 IVFQVESGAHCIQIFDSWGGQLPPHMWELWSKPYIKEIVNLVKKKCPDTPLVLYINGNGG 300

Query: 297 LLERMVDTGVDVIGLDWTVDMADGRRRLGSGIGVQGNVDPASLFSPLSSLTEEIQRVVKC 356
           LLERMVDTGVDVIGLDWTVDMADGRRRLGSGIGVQGNVDPASLFSPL+SLTEEIQRVV+ 
Sbjct: 301 LLERMVDTGVDVIGLDWTVDMADGRRRLGSGIGVQGNVDPASLFSPLTSLTEEIQRVVRS 360

Query: 357 AGPRGHILNLGHGVLVGTPEEAVAHFFEVARSLKFDTHFQNTTAN 401
           AGPR HILNLGHGVLVGTPEEAVAHFF+VARSLKFDT  QN TAN
Sbjct: 361 AGPRQHILNLGHGVLVGTPEEAVAHFFDVARSLKFDTVSQNNTAN 405


>Medtr3g072330.1 | uroporphyrinogen decarboxylase | HC |
           chr3:32489055-32484665 | 20130731
          Length = 389

 Score =  394 bits (1011), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 186/342 (54%), Positives = 247/342 (72%), Gaps = 1/342 (0%)

Query: 51  DPLLVKAARGDPVSRPPAWMMRQAGRYMAVYRKLAEKHPSFRERSETTDLIVEISLQPWK 110
           +PLL+ A RG  V RPP W+MRQAGRYM  Y+ + EK+PSFRERSE  DL+VEISLQPWK
Sbjct: 48  EPLLLNAVRGLDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWK 107

Query: 111 AFRPDGVIIFSDILTPLPAFGIEFDIEDVRGPVIQSPIRSEEGLKALHS-IDLDRLRFVG 169
            F+PDGVI+FSDILTPL    I FDI   +GPVI  P+ S   +  +   I  + + +VG
Sbjct: 108 VFQPDGVILFSDILTPLSGMNIPFDIVKGKGPVIFDPVHSAGQVDQVREFIPEESVPYVG 167

Query: 170 DSLKLLRQEAGGHAAVLGFVGAPWTLATYIVEGGTTRTYTTIKSMCHTAPDILRTLLSHL 229
           ++L +LR+E    +AVLGFVGAP+TLA+Y+VEGG+++ ++ IK +  + P IL +LL   
Sbjct: 168 EALSILRKEVDNKSAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSEPKILHSLLQKF 227

Query: 230 SQAIADYIVFQVESGAHCIQIFDSWGGQLPPSMWESWSKPYITEIVKVVKKKCPETPIVL 289
           + ++A YI +Q ++GA  +QIFDSW  +L P  +E +S PY+ +I+  VKK  PE P++L
Sbjct: 228 TTSMARYIQYQADNGAQAVQIFDSWATELSPVDFERFSLPYLKQIIDTVKKSHPELPLIL 287

Query: 290 YINGNGGLLERMVDTGVDVIGLDWTVDMADGRRRLGSGIGVQGNVDPASLFSPLSSLTEE 349
           Y +G+GGLLER+  TGVDV+ LDWTVDMADGRRRLG  + +QGNVDP  LF     +T+ 
Sbjct: 288 YASGSGGLLERIALTGVDVVSLDWTVDMADGRRRLGPNVAIQGNVDPGVLFGSKELITDR 347

Query: 350 IQRVVKCAGPRGHILNLGHGVLVGTPEEAVAHFFEVARSLKF 391
           I   V+ AG   HILNLGHG++VGTPEE VAHFFEVA+ +K+
Sbjct: 348 IHDTVRKAGRGKHILNLGHGIVVGTPEENVAHFFEVAKGIKY 389