Miyakogusa Predicted Gene

Lj0g3v0271799.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0271799.1 Non Characterized Hit- tr|I3SNY5|I3SNY5_MEDTR
Uncharacterized protein OS=Medicago truncatula PE=4
SV,64.86,2e-16,seg,NULL; DnaJ/Hsp40 cysteine-rich domain,Heat shock
protein DnaJ, cysteine-rich domain,CUFF.17966.1
         (150 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g105830.1 | Tsi1-interacting protein TSIP1 | HC | chr3:488...   182   1e-46
Medtr3g105830.2 | Tsi1-interacting protein TSIP1 | HC | chr3:488...   133   6e-32
Medtr1g024840.1 | protein disulfide-isomerase LQY1 | HC | chr1:7...    47   9e-06

>Medtr3g105830.1 | Tsi1-interacting protein TSIP1 | HC |
           chr3:48817527-48815451 | 20130731
          Length = 144

 Score =  182 bits (461), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 91/121 (75%), Positives = 103/121 (85%), Gaps = 3/121 (2%)

Query: 32  IALNVDGTASSSFSRNSRLRIRVSMVDSSS---NFAKRIERAWLISQQPTPIVCSSCNSK 88
           IA+   G  S   +R SRL +RVSM DSSS   +F KR+E+AWLISQQP P+VCSSC+SK
Sbjct: 24  IAVVFCGNRSFVTNRISRLCVRVSMFDSSSSSSDFTKRMEQAWLISQQPRPVVCSSCSSK 83

Query: 89  GHIECKWCAGTGFFIIGDNMLCEVPSRNTSCIICTGKGSTCCSNCQGTGFRAKWLEEPPT 148
           GHIECKWC GTGFF++GDNMLCEVPSRNTSCIIC+G+GSTCCSNCQGTGFRAKWLEEPP 
Sbjct: 84  GHIECKWCGGTGFFVLGDNMLCEVPSRNTSCIICSGQGSTCCSNCQGTGFRAKWLEEPPA 143

Query: 149 S 149
           S
Sbjct: 144 S 144


>Medtr3g105830.2 | Tsi1-interacting protein TSIP1 | HC |
           chr3:48817527-48815451 | 20130731
          Length = 123

 Score =  133 bits (335), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 68/97 (70%), Positives = 80/97 (82%), Gaps = 3/97 (3%)

Query: 32  IALNVDGTASSSFSRNSRLRIRVSMVDSSS---NFAKRIERAWLISQQPTPIVCSSCNSK 88
           IA+   G  S   +R SRL +RVSM DSSS   +F KR+E+AWLISQQP P+VCSSC+SK
Sbjct: 24  IAVVFCGNRSFVTNRISRLCVRVSMFDSSSSSSDFTKRMEQAWLISQQPRPVVCSSCSSK 83

Query: 89  GHIECKWCAGTGFFIIGDNMLCEVPSRNTSCIICTGK 125
           GHIECKWC GTGFF++GDNMLCEVPSRNTSCIIC+G+
Sbjct: 84  GHIECKWCGGTGFFVLGDNMLCEVPSRNTSCIICSGQ 120


>Medtr1g024840.1 | protein disulfide-isomerase LQY1 | HC |
           chr1:7926622-7924436 | 20130731
          Length = 157

 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 9/66 (13%)

Query: 82  CSSCNSKGHIECKWCAGTGFFIIGDNMLCEVPSRNTS---CIICTGKGSTCCSNCQGTGF 138
           C  CN  G  +C++C GTG      N+  E+    T    CI C G GS  C+ CQG+G 
Sbjct: 90  CFPCNGSGAQKCRFCLGTG------NVTVELGGAETEVSRCINCDGAGSLTCTTCQGSGI 143

Query: 139 RAKWLE 144
           + ++L+
Sbjct: 144 QPRYLD 149