Miyakogusa Predicted Gene

Lj0g3v0271449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0271449.1 Non Characterized Hit- tr|G1KYF7|G1KYF7_ANOCA
Uncharacterized protein (Fragment) OS=Anolis
carolinen,34.53,1e-18,coiled-coil,NULL; seg,NULL,CUFF.17948.1
         (319 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA hel...   431   e-121
Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA hel...   431   e-121
Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA hel...   431   e-121
Medtr1g010030.1 | pre-mRNA-splicing factor ATP-dependent RNA hel...   396   e-110
Medtr1g010030.2 | pre-mRNA-splicing factor ATP-dependent RNA hel...   396   e-110
Medtr6g061840.3 | pre-mRNA-splicing factor ATP-dependent RNA hel...   209   3e-54
Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA hel...   209   3e-54
Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA hel...   209   3e-54
Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA hel...   165   7e-41
Medtr8g041990.1 | pre-mRNA-splicing factor ATP-dependent RNA hel...   101   9e-22

>Medtr3g023880.2 | pre-mRNA-splicing factor ATP-dependent RNA
           helicase | HC | chr3:7279343-7291756 | 20130731
          Length = 1055

 Score =  431 bits (1107), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/320 (73%), Positives = 262/320 (81%), Gaps = 3/320 (0%)

Query: 1   MLARRQKTYTILKDDENSDDDN-VGGEDKSSITTASSSRKLD--KKRFRKKTEVQDDQDD 57
           MLAR+Q TYTILKDD++ DDD+ VGG+DKSSITTAS+SRK D  KKRFRKKTEVQDDQ+D
Sbjct: 87  MLARKQATYTILKDDDDIDDDHTVGGDDKSSITTASTSRKPDNHKKRFRKKTEVQDDQED 146

Query: 58  EVISRKERERQVKRRISPDEDNXXXXXXXRLKDQREKEELEQHLRERDAAGTRKLTESKL 117
           EVISRKERERQVKRR SPDE++       RLKDQREK+EL QH+RERDAA TRKLTE KL
Sbjct: 147 EVISRKERERQVKRRTSPDEESGSESEEERLKDQREKDELVQHMRERDAAATRKLTEQKL 206

Query: 118 TRKEEEEATRRSQAAEQDGIQSLRKVSXXXXXXXXXXXXXXXXXXXXXXXQYLFEGVKLT 177
           TRKEEEEA RRS AAEQD ++SLRK S                       QYLF+GVKL+
Sbjct: 207 TRKEEEEAIRRSNAAEQDDLRSLRKYSRQEYLKKREEKKLEELRDDIEDEQYLFDGVKLS 266

Query: 178 EAEQSELRYKKEIYELVKKRYEEADNVNEYRMPEAYDQDGVIDQEKRFSVAMQRYRDPNP 237
           E EQ ELR+KKE+YEL+KKR EEADNVNEYRMP+AYDQ+G ++QEKRFSVAMQRYRD N 
Sbjct: 267 EVEQRELRHKKELYELIKKRSEEADNVNEYRMPDAYDQEGGVNQEKRFSVAMQRYRDTNA 326

Query: 238 EDKMNPFAEQEAWEDHQIGKGTLKYGSKNKRQVSDDYQFVFEDQIDFIKESVMDGDKFDY 297
           E+KMNPFAEQEAWE+HQIGK TLKYGSKNK+  SDDYQFVFEDQIDFIK SVMDGDKFD 
Sbjct: 327 EEKMNPFAEQEAWEEHQIGKATLKYGSKNKKLASDDYQFVFEDQIDFIKASVMDGDKFDN 386

Query: 298 EETEDSLEKSRAKSALEALQ 317
           +E  DS+EKS+AKSA EALQ
Sbjct: 387 DEMADSIEKSKAKSAAEALQ 406


>Medtr3g023880.1 | pre-mRNA-splicing factor ATP-dependent RNA
           helicase | HC | chr3:7279343-7291756 | 20130731
          Length = 1055

 Score =  431 bits (1107), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/320 (73%), Positives = 262/320 (81%), Gaps = 3/320 (0%)

Query: 1   MLARRQKTYTILKDDENSDDDN-VGGEDKSSITTASSSRKLD--KKRFRKKTEVQDDQDD 57
           MLAR+Q TYTILKDD++ DDD+ VGG+DKSSITTAS+SRK D  KKRFRKKTEVQDDQ+D
Sbjct: 87  MLARKQATYTILKDDDDIDDDHTVGGDDKSSITTASTSRKPDNHKKRFRKKTEVQDDQED 146

Query: 58  EVISRKERERQVKRRISPDEDNXXXXXXXRLKDQREKEELEQHLRERDAAGTRKLTESKL 117
           EVISRKERERQVKRR SPDE++       RLKDQREK+EL QH+RERDAA TRKLTE KL
Sbjct: 147 EVISRKERERQVKRRTSPDEESGSESEEERLKDQREKDELVQHMRERDAAATRKLTEQKL 206

Query: 118 TRKEEEEATRRSQAAEQDGIQSLRKVSXXXXXXXXXXXXXXXXXXXXXXXQYLFEGVKLT 177
           TRKEEEEA RRS AAEQD ++SLRK S                       QYLF+GVKL+
Sbjct: 207 TRKEEEEAIRRSNAAEQDDLRSLRKYSRQEYLKKREEKKLEELRDDIEDEQYLFDGVKLS 266

Query: 178 EAEQSELRYKKEIYELVKKRYEEADNVNEYRMPEAYDQDGVIDQEKRFSVAMQRYRDPNP 237
           E EQ ELR+KKE+YEL+KKR EEADNVNEYRMP+AYDQ+G ++QEKRFSVAMQRYRD N 
Sbjct: 267 EVEQRELRHKKELYELIKKRSEEADNVNEYRMPDAYDQEGGVNQEKRFSVAMQRYRDTNA 326

Query: 238 EDKMNPFAEQEAWEDHQIGKGTLKYGSKNKRQVSDDYQFVFEDQIDFIKESVMDGDKFDY 297
           E+KMNPFAEQEAWE+HQIGK TLKYGSKNK+  SDDYQFVFEDQIDFIK SVMDGDKFD 
Sbjct: 327 EEKMNPFAEQEAWEEHQIGKATLKYGSKNKKLASDDYQFVFEDQIDFIKASVMDGDKFDN 386

Query: 298 EETEDSLEKSRAKSALEALQ 317
           +E  DS+EKS+AKSA EALQ
Sbjct: 387 DEMADSIEKSKAKSAAEALQ 406


>Medtr3g023880.3 | pre-mRNA-splicing factor ATP-dependent RNA
           helicase | HC | chr3:7279343-7291756 | 20130731
          Length = 1055

 Score =  431 bits (1107), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/320 (73%), Positives = 262/320 (81%), Gaps = 3/320 (0%)

Query: 1   MLARRQKTYTILKDDENSDDDN-VGGEDKSSITTASSSRKLD--KKRFRKKTEVQDDQDD 57
           MLAR+Q TYTILKDD++ DDD+ VGG+DKSSITTAS+SRK D  KKRFRKKTEVQDDQ+D
Sbjct: 87  MLARKQATYTILKDDDDIDDDHTVGGDDKSSITTASTSRKPDNHKKRFRKKTEVQDDQED 146

Query: 58  EVISRKERERQVKRRISPDEDNXXXXXXXRLKDQREKEELEQHLRERDAAGTRKLTESKL 117
           EVISRKERERQVKRR SPDE++       RLKDQREK+EL QH+RERDAA TRKLTE KL
Sbjct: 147 EVISRKERERQVKRRTSPDEESGSESEEERLKDQREKDELVQHMRERDAAATRKLTEQKL 206

Query: 118 TRKEEEEATRRSQAAEQDGIQSLRKVSXXXXXXXXXXXXXXXXXXXXXXXQYLFEGVKLT 177
           TRKEEEEA RRS AAEQD ++SLRK S                       QYLF+GVKL+
Sbjct: 207 TRKEEEEAIRRSNAAEQDDLRSLRKYSRQEYLKKREEKKLEELRDDIEDEQYLFDGVKLS 266

Query: 178 EAEQSELRYKKEIYELVKKRYEEADNVNEYRMPEAYDQDGVIDQEKRFSVAMQRYRDPNP 237
           E EQ ELR+KKE+YEL+KKR EEADNVNEYRMP+AYDQ+G ++QEKRFSVAMQRYRD N 
Sbjct: 267 EVEQRELRHKKELYELIKKRSEEADNVNEYRMPDAYDQEGGVNQEKRFSVAMQRYRDTNA 326

Query: 238 EDKMNPFAEQEAWEDHQIGKGTLKYGSKNKRQVSDDYQFVFEDQIDFIKESVMDGDKFDY 297
           E+KMNPFAEQEAWE+HQIGK TLKYGSKNK+  SDDYQFVFEDQIDFIK SVMDGDKFD 
Sbjct: 327 EEKMNPFAEQEAWEEHQIGKATLKYGSKNKKLASDDYQFVFEDQIDFIKASVMDGDKFDN 386

Query: 298 EETEDSLEKSRAKSALEALQ 317
           +E  DS+EKS+AKSA EALQ
Sbjct: 387 DEMADSIEKSKAKSAAEALQ 406


>Medtr1g010030.1 | pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16, putative | HC | chr1:1700852-1690934 |
           20130731
          Length = 516

 Score =  396 bits (1017), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 218/321 (67%), Positives = 247/321 (76%), Gaps = 11/321 (3%)

Query: 1   MLARRQKTYTILKDDENSDDDN-VGGEDKSSITTASSSRKLD--KKRFRKKTEVQDDQDD 57
           MLAR+Q TYTILKDD+  DDD+ V G+DKSSITTAS+SRK D  KKRFRKKTEV      
Sbjct: 81  MLARKQGTYTILKDDDCIDDDHIVSGDDKSSITTASTSRKPDSHKKRFRKKTEVS----- 135

Query: 58  EVISRKERERQVKRRISPDEDNXXXXXXXRLKDQREKEELEQHLRERDAAGTRKLTESKL 117
              SRKERERQVKRRI+ +ED+       RLKDQREK+EL QH+RERDAA TRKLTE KL
Sbjct: 136 ---SRKERERQVKRRITVNEDSGSESEEERLKDQREKDELVQHMRERDAAATRKLTEQKL 192

Query: 118 TRKEEEEATRRSQAAEQDGIQSLRKVSXXXXXXXXXXXXXXXXXXXXXXXQYLFEGVKLT 177
            R EE+EA RRS AAE D ++ LRK S                       QYLFEGVKL+
Sbjct: 193 ARMEEDEAIRRSNAAEHDDMRCLRKYSRQEYLKKREEKKLEELRDDIEDEQYLFEGVKLS 252

Query: 178 EAEQSELRYKKEIYELVKKRYEEADNVNEYRMPEAYDQDGVIDQEKRFSVAMQRYRDPNP 237
           E EQ EL++KKE+YEL+KKR E ADNVNEYRMP+AYDQ+G +DQEKRFSVAMQRYRD N 
Sbjct: 253 EVEQRELKHKKELYELIKKRSEHADNVNEYRMPDAYDQEGDVDQEKRFSVAMQRYRDSNA 312

Query: 238 EDKMNPFAEQEAWEDHQIGKGTLKYGSKNKRQVSDDYQFVFEDQIDFIKESVMDGDKFDY 297
           E+KMNPF+EQEAWE+HQIGK T+KYGSKNK+Q SDDYQFVFEDQIDFIK SVMDGDKFDY
Sbjct: 313 EEKMNPFSEQEAWEEHQIGKATMKYGSKNKKQASDDYQFVFEDQIDFIKASVMDGDKFDY 372

Query: 298 EETEDSLEKSRAKSALEALQV 318
            E  DS+EKS+AKSA EAL +
Sbjct: 373 HEMADSIEKSKAKSASEALAI 393


>Medtr1g010030.2 | pre-mRNA-splicing factor ATP-dependent RNA
           helicase DHX16, putative | HC | chr1:1699852-1693353 |
           20130731
          Length = 396

 Score =  396 bits (1017), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 218/321 (67%), Positives = 247/321 (76%), Gaps = 11/321 (3%)

Query: 1   MLARRQKTYTILKDDENSDDDN-VGGEDKSSITTASSSRKLD--KKRFRKKTEVQDDQDD 57
           MLAR+Q TYTILKDD+  DDD+ V G+DKSSITTAS+SRK D  KKRFRKKTEV      
Sbjct: 81  MLARKQGTYTILKDDDCIDDDHIVSGDDKSSITTASTSRKPDSHKKRFRKKTEVS----- 135

Query: 58  EVISRKERERQVKRRISPDEDNXXXXXXXRLKDQREKEELEQHLRERDAAGTRKLTESKL 117
              SRKERERQVKRRI+ +ED+       RLKDQREK+EL QH+RERDAA TRKLTE KL
Sbjct: 136 ---SRKERERQVKRRITVNEDSGSESEEERLKDQREKDELVQHMRERDAAATRKLTEQKL 192

Query: 118 TRKEEEEATRRSQAAEQDGIQSLRKVSXXXXXXXXXXXXXXXXXXXXXXXQYLFEGVKLT 177
            R EE+EA RRS AAE D ++ LRK S                       QYLFEGVKL+
Sbjct: 193 ARMEEDEAIRRSNAAEHDDMRCLRKYSRQEYLKKREEKKLEELRDDIEDEQYLFEGVKLS 252

Query: 178 EAEQSELRYKKEIYELVKKRYEEADNVNEYRMPEAYDQDGVIDQEKRFSVAMQRYRDPNP 237
           E EQ EL++KKE+YEL+KKR E ADNVNEYRMP+AYDQ+G +DQEKRFSVAMQRYRD N 
Sbjct: 253 EVEQRELKHKKELYELIKKRSEHADNVNEYRMPDAYDQEGDVDQEKRFSVAMQRYRDSNA 312

Query: 238 EDKMNPFAEQEAWEDHQIGKGTLKYGSKNKRQVSDDYQFVFEDQIDFIKESVMDGDKFDY 297
           E+KMNPF+EQEAWE+HQIGK T+KYGSKNK+Q SDDYQFVFEDQIDFIK SVMDGDKFDY
Sbjct: 313 EEKMNPFSEQEAWEEHQIGKATMKYGSKNKKQASDDYQFVFEDQIDFIKASVMDGDKFDY 372

Query: 298 EETEDSLEKSRAKSALEALQV 318
            E  DS+EKS+AKSA EAL +
Sbjct: 373 HEMADSIEKSKAKSASEALAI 393


>Medtr6g061840.3 | pre-mRNA-splicing factor ATP-dependent RNA
           helicase | HC | chr6:24007593-24013184 | 20130731
          Length = 587

 Score =  209 bits (532), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/278 (50%), Positives = 175/278 (62%), Gaps = 37/278 (13%)

Query: 42  KKRFRKKTEVQDDQDDEVISRKERERQVKRRISPDEDNXXXXXXXRLKDQREKEELEQHL 101
           +KR RK  +V+           E+ER+ KRR S  ++         LKDQREKEELEQ L
Sbjct: 4   RKRSRKSVQVE-----------EKEREFKRRASSGDEEM-------LKDQREKEELEQRL 45

Query: 102 RERDAAGTRKLTESKLTRKEEEEATRRSQAAEQDG-IQSLRKVSXXXXXXXXXXXXXXXX 160
           RERDAA TRKL E K  +       R+S AAE++  I++LR+VS                
Sbjct: 46  RERDAARTRKLAEPKAIQ-------RKSNAAEENKDIRALREVSRQKYLKKREEQKLQEL 98

Query: 161 XXXXXXXQYLFEGVKLTEAEQSELRYKKEIYELVKKRYEEADNVNEYRMPEAYD-QDGVI 219
                   YLFEGVK ++ E  +  +KK+IY ++ K+ E  +  +EYR+PEAYD Q   +
Sbjct: 99  RDDIEDEHYLFEGVKRSDVEYRDFMHKKDIYNVLAKK-ELENGGHEYRIPEAYDDQQAGV 157

Query: 220 DQEKRFSVAMQRYRDPNPEDKMNPFAEQEAWEDHQIGKGTLKYGSKNKRQVSDDYQFVFE 279
           +QEKRFSVA QRY DPN E       ++EAWE+HQI K TLK+GSK+KRQV DDYQFVFE
Sbjct: 158 NQEKRFSVARQRYNDPNAE-------KEEAWEEHQIRKATLKFGSKDKRQVCDDYQFVFE 210

Query: 280 DQIDFIKESVMDGDKFDYEETEDSLEKSRAK-SALEAL 316
           DQID IK SVMDG KFDYE+ E +LEKSRAK SAL+A+
Sbjct: 211 DQIDLIKASVMDGVKFDYEK-EVALEKSRAKRSALDAI 247


>Medtr6g061840.2 | pre-mRNA-splicing factor ATP-dependent RNA
           helicase | HC | chr6:24007593-24013184 | 20130731
          Length = 768

 Score =  209 bits (532), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/278 (50%), Positives = 175/278 (62%), Gaps = 37/278 (13%)

Query: 42  KKRFRKKTEVQDDQDDEVISRKERERQVKRRISPDEDNXXXXXXXRLKDQREKEELEQHL 101
           +KR RK  +V+           E+ER+ KRR S  ++         LKDQREKEELEQ L
Sbjct: 4   RKRSRKSVQVE-----------EKEREFKRRASSGDEEM-------LKDQREKEELEQRL 45

Query: 102 RERDAAGTRKLTESKLTRKEEEEATRRSQAAEQDG-IQSLRKVSXXXXXXXXXXXXXXXX 160
           RERDAA TRKL E K  +       R+S AAE++  I++LR+VS                
Sbjct: 46  RERDAARTRKLAEPKAIQ-------RKSNAAEENKDIRALREVSRQKYLKKREEQKLQEL 98

Query: 161 XXXXXXXQYLFEGVKLTEAEQSELRYKKEIYELVKKRYEEADNVNEYRMPEAYD-QDGVI 219
                   YLFEGVK ++ E  +  +KK+IY ++ K+ E  +  +EYR+PEAYD Q   +
Sbjct: 99  RDDIEDEHYLFEGVKRSDVEYRDFMHKKDIYNVLAKK-ELENGGHEYRIPEAYDDQQAGV 157

Query: 220 DQEKRFSVAMQRYRDPNPEDKMNPFAEQEAWEDHQIGKGTLKYGSKNKRQVSDDYQFVFE 279
           +QEKRFSVA QRY DPN E       ++EAWE+HQI K TLK+GSK+KRQV DDYQFVFE
Sbjct: 158 NQEKRFSVARQRYNDPNAE-------KEEAWEEHQIRKATLKFGSKDKRQVCDDYQFVFE 210

Query: 280 DQIDFIKESVMDGDKFDYEETEDSLEKSRAK-SALEAL 316
           DQID IK SVMDG KFDYE+ E +LEKSRAK SAL+A+
Sbjct: 211 DQIDLIKASVMDGVKFDYEK-EVALEKSRAKRSALDAI 247


>Medtr6g061840.1 | pre-mRNA-splicing factor ATP-dependent RNA
           helicase | HC | chr6:24007593-24013184 | 20130731
          Length = 904

 Score =  209 bits (531), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 139/278 (50%), Positives = 175/278 (62%), Gaps = 37/278 (13%)

Query: 42  KKRFRKKTEVQDDQDDEVISRKERERQVKRRISPDEDNXXXXXXXRLKDQREKEELEQHL 101
           +KR RK  +V+           E+ER+ KRR S  ++         LKDQREKEELEQ L
Sbjct: 4   RKRSRKSVQVE-----------EKEREFKRRASSGDEEM-------LKDQREKEELEQRL 45

Query: 102 RERDAAGTRKLTESKLTRKEEEEATRRSQAAEQDG-IQSLRKVSXXXXXXXXXXXXXXXX 160
           RERDAA TRKL E K  +       R+S AAE++  I++LR+VS                
Sbjct: 46  RERDAARTRKLAEPKAIQ-------RKSNAAEENKDIRALREVSRQKYLKKREEQKLQEL 98

Query: 161 XXXXXXXQYLFEGVKLTEAEQSELRYKKEIYELVKKRYEEADNVNEYRMPEAYD-QDGVI 219
                   YLFEGVK ++ E  +  +KK+IY ++ K+ E  +  +EYR+PEAYD Q   +
Sbjct: 99  RDDIEDEHYLFEGVKRSDVEYRDFMHKKDIYNVLAKK-ELENGGHEYRIPEAYDDQQAGV 157

Query: 220 DQEKRFSVAMQRYRDPNPEDKMNPFAEQEAWEDHQIGKGTLKYGSKNKRQVSDDYQFVFE 279
           +QEKRFSVA QRY DPN E       ++EAWE+HQI K TLK+GSK+KRQV DDYQFVFE
Sbjct: 158 NQEKRFSVARQRYNDPNAE-------KEEAWEEHQIRKATLKFGSKDKRQVCDDYQFVFE 210

Query: 280 DQIDFIKESVMDGDKFDYEETEDSLEKSRAK-SALEAL 316
           DQID IK SVMDG KFDYE+ E +LEKSRAK SAL+A+
Sbjct: 211 DQIDLIKASVMDGVKFDYEK-EVALEKSRAKRSALDAI 247


>Medtr5g075310.1 | pre-mRNA-splicing factor ATP-dependent RNA
           helicase | HC | chr5:31994096-31996650 | 20130731
          Length = 808

 Score =  165 bits (417), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 93/156 (59%), Positives = 115/156 (73%), Gaps = 16/156 (10%)

Query: 168 QYLFEGVKLTEAEQSELRYKKEIYELVKKR--YEEADNVNEYRMPEAYD---QDGVIDQE 222
           QYLFEGV++++AE  +L++KK+IY++V K+   E A++  EY MPEAYD   Q G ++QE
Sbjct: 58  QYLFEGVRVSKAEYCDLKHKKDIYDVVSKKRGLESAEDYKEYIMPEAYDDHQQSGGVNQE 117

Query: 223 KRFSVAMQRYRDPNPEDKMNPFAEQEAWEDHQIGKGTLKYGSKNKRQVSDDYQFVFEDQI 282
           KRFSVA QRY   + E         EAWE+HQI K T+K+GSKNK  VSDDYQFVFEDQI
Sbjct: 118 KRFSVATQRYSTADKE---------EAWEEHQIRKATMKFGSKNKTNVSDDYQFVFEDQI 168

Query: 283 DFIKESVMDGDKFDYEETEDSLEKSRAK-SALEALQ 317
           D IKESVM GDKFD +E E + EKSRAK SA EAL+
Sbjct: 169 DVIKESVMGGDKFDCQE-EIASEKSRAKRSAYEALK 203


>Medtr8g041990.1 | pre-mRNA-splicing factor ATP-dependent RNA
           helicase | HC | chr8:15840782-15843798 | 20130731
          Length = 650

 Score =  101 bits (252), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 52/72 (72%), Positives = 59/72 (81%), Gaps = 2/72 (2%)

Query: 247 QEAWEDHQIGKGTLKYGSKNKRQVSDDYQFVFEDQIDFIKESVMDGDKFDYEETEDSLEK 306
           +EAWE+HQI K  LKYGSKNKRQVSDDY+FVFE+QID IK SVMDG KFDY + E +L+K
Sbjct: 30  EEAWEEHQIRKAKLKYGSKNKRQVSDDYRFVFEEQIDCIKASVMDGHKFDYGQ-EIALKK 88

Query: 307 SRAK-SALEALQ 317
           S AK S  EALQ
Sbjct: 89  SSAKRSVFEALQ 100