Miyakogusa Predicted Gene

Lj0g3v0271239.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0271239.1 Non Characterized Hit- tr|I3SHT2|I3SHT2_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,100,0.00000000000009, ,CUFF.17926.1
         (38 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g092080.2 | lipocalin-like domain protein | HC | chr5:4020...    61   2e-10
Medtr5g092080.1 | lipocalin-like domain protein | HC | chr5:4020...    61   2e-10

>Medtr5g092080.2 | lipocalin-like domain protein | HC |
           chr5:40202441-40206173 | 20130731
          Length = 334

 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/38 (73%), Positives = 31/38 (81%)

Query: 1   MMSMSGMQQALTNQFPDIGLKAPIEFNPFTSVFDTFKK 38
           MMSMSGMQQALTNQFPD+ LK  + F+P TSVF T KK
Sbjct: 290 MMSMSGMQQALTNQFPDLELKGSVAFDPLTSVFGTLKK 327


>Medtr5g092080.1 | lipocalin-like domain protein | HC |
           chr5:40202497-40206144 | 20130731
          Length = 337

 Score = 60.8 bits (146), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 28/38 (73%), Positives = 31/38 (81%)

Query: 1   MMSMSGMQQALTNQFPDIGLKAPIEFNPFTSVFDTFKK 38
           MMSMSGMQQALTNQFPD+ LK  + F+P TSVF T KK
Sbjct: 293 MMSMSGMQQALTNQFPDLELKGSVAFDPLTSVFGTLKK 330