Miyakogusa Predicted Gene

Lj0g3v0269659.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0269659.1 Non Characterized Hit- tr|I1IFN5|I1IFN5_BRADI
Uncharacterized protein OS=Brachypodium distachyon
GN=,57.69,3e-19,PRENYLTRANSFERASES,NULL,CUFF.17815.1
         (137 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr7g073970.1 | 4-hydroxybenzoate polyprenyltransferase | HC |...   122   8e-29
Medtr3g111660.1 | UbiA family prenyltransferase | HC | chr3:5221...   105   1e-23

>Medtr7g073970.1 | 4-hydroxybenzoate polyprenyltransferase | HC |
           chr7:27603078-27606912 | 20130731
          Length = 400

 Score =  122 bits (307), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 58/81 (71%), Positives = 66/81 (81%), Gaps = 1/81 (1%)

Query: 19  VCRLMMF-SILGMQDKEDDLKVGVKSTALRFGDLTKEWITGFGFACLGNVALSGFNAELG 77
           VC  +++ +I   QDKEDDLKVGVKSTALRFGD TKEW+TGFG A L  +ALSGFNAELG
Sbjct: 287 VCWTLVYDTIYAHQDKEDDLKVGVKSTALRFGDSTKEWLTGFGIASLSGLALSGFNAELG 346

Query: 78  WPYYACLAAASGHLGWQVWKL 98
           WPYYA L  ASGHLGWQ+W +
Sbjct: 347 WPYYAFLGVASGHLGWQIWTV 367


>Medtr3g111660.1 | UbiA family prenyltransferase | HC |
           chr3:52211240-52208196 | 20130731
          Length = 303

 Score =  105 bits (262), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 51/74 (68%), Positives = 59/74 (79%), Gaps = 1/74 (1%)

Query: 19  VCRLMMF-SILGMQDKEDDLKVGVKSTALRFGDLTKEWITGFGFACLGNVALSGFNAELG 77
           VC  +++ +I   QDK+DDLKVGVKSTALRFGD TKEW+TGFG A L  +ALSG NAELG
Sbjct: 230 VCWTLVYDTIYAHQDKDDDLKVGVKSTALRFGDSTKEWLTGFGIASLSGLALSGLNAELG 289

Query: 78  WPYYACLAAASGHL 91
           WPYYA L  ASGH+
Sbjct: 290 WPYYAVLGVASGHI 303