Miyakogusa Predicted Gene

Lj0g3v0269479.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0269479.1 tr|B9SYY1|B9SYY1_RICCO Phosphatidate
cytidylyltransferase OS=Ricinus communis GN=RCOM_0546750 PE=3
S,62.9,0.0000000000005,seg,NULL; SUBFAMILY NOT NAMED,NULL;
PHOSPHATIDATE CYTIDYLYLTRANSFERASE,NULL;
CTP_transf_1,Phosphatid,CUFF.17810.1
         (424 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g025550.1 | phosphatidate cytidylyltransferase family prot...   738   0.0  
Medtr2g025550.3 | phosphatidate cytidylyltransferase family prot...   738   0.0  
Medtr2g025550.2 | phosphatidate cytidylyltransferase family prot...   729   0.0  
Medtr5g093840.1 | phosphatidate cytidylyltransferase family prot...   608   e-174
Medtr3g466380.1 | phosphatidate cytidylyltransferase family prot...    64   4e-10
Medtr3g466380.2 | phosphatidate cytidylyltransferase family prot...    62   9e-10

>Medtr2g025550.1 | phosphatidate cytidylyltransferase family protein
           | HC | chr2:9142048-9135510 | 20130731
          Length = 569

 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/409 (87%), Positives = 378/409 (92%), Gaps = 1/409 (0%)

Query: 16  RIRHRKRSNEVIPEVSKANGT-KLLVNDKSKYKSMLIRAYSSIWMIGGFALIIYMGHLYI 74
           RIRHRKRSNEVIPEVSKANG+ +LLVNDKSKYKSMLIRAYSS+WMIG F LIIYMGHLYI
Sbjct: 160 RIRHRKRSNEVIPEVSKANGSGQLLVNDKSKYKSMLIRAYSSVWMIGSFVLIIYMGHLYI 219

Query: 75  TAMVVVIQIFMASELFNLLRRAHEDRQLPGFRLLNWHFFFTAMLFVYGRILNQRLANTVT 134
           TAM+VVIQIFMA ELFNLLRRAHED+QLPGFRLLNWHFFFTAMLFVYGRIL+QRL NTV 
Sbjct: 220 TAMIVVIQIFMARELFNLLRRAHEDKQLPGFRLLNWHFFFTAMLFVYGRILSQRLVNTVN 279

Query: 135 SDMVLYRLVSNLIKYHMVICYSLYIAGFMWFILTLKKKMYKYQFGQYAWTHMILIVVFGQ 194
           SD VLYRLVS+LIKYHMV+CYSLYI GF+WFILTLKKKMYKYQFGQYAWTHMILIVVFGQ
Sbjct: 280 SDKVLYRLVSSLIKYHMVVCYSLYITGFIWFILTLKKKMYKYQFGQYAWTHMILIVVFGQ 339

Query: 195 SSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASFTT 254
           SSFTV SIFEGIFWFLLPA+LIVINDIAAYIFGFFFG+TPLIKLSPKKTWEGFIGAS TT
Sbjct: 340 SSFTVPSIFEGIFWFLLPATLIVINDIAAYIFGFFFGKTPLIKLSPKKTWEGFIGASVTT 399

Query: 255 IISAFLLADILGHSQWLTCPRKDLSTGWLHCDPGPMFKPESYTLPGWISQWFGWKEVSIL 314
           IISAF+LA+I+G SQWLTCPRKDLSTGWL CDPG +FKPESY+L GW   WF WKE+SIL
Sbjct: 400 IISAFMLANIMGRSQWLTCPRKDLSTGWLDCDPGFLFKPESYSLLGWTPHWFPWKEISIL 459

Query: 315 PVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGMTDRMDCQMVMAVFA 374
           PVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGG+TDRMDCQMVMAVFA
Sbjct: 460 PVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGLTDRMDCQMVMAVFA 519

Query: 375 YIYXXXXXXXXXXXXETILDQILMNLTFDEQEALYRRLGEMLQQGIQRM 423
           YIY            E ILDQILM+L+F+EQEALYRRLGE+LQQGIQRM
Sbjct: 520 YIYHQSFVVPQSLSVEMILDQILMSLSFEEQEALYRRLGEVLQQGIQRM 568


>Medtr2g025550.3 | phosphatidate cytidylyltransferase family protein
           | HC | chr2:9142403-9135425 | 20130731
          Length = 482

 Score =  738 bits (1906), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/409 (87%), Positives = 378/409 (92%), Gaps = 1/409 (0%)

Query: 16  RIRHRKRSNEVIPEVSKANGT-KLLVNDKSKYKSMLIRAYSSIWMIGGFALIIYMGHLYI 74
           RIRHRKRSNEVIPEVSKANG+ +LLVNDKSKYKSMLIRAYSS+WMIG F LIIYMGHLYI
Sbjct: 73  RIRHRKRSNEVIPEVSKANGSGQLLVNDKSKYKSMLIRAYSSVWMIGSFVLIIYMGHLYI 132

Query: 75  TAMVVVIQIFMASELFNLLRRAHEDRQLPGFRLLNWHFFFTAMLFVYGRILNQRLANTVT 134
           TAM+VVIQIFMA ELFNLLRRAHED+QLPGFRLLNWHFFFTAMLFVYGRIL+QRL NTV 
Sbjct: 133 TAMIVVIQIFMARELFNLLRRAHEDKQLPGFRLLNWHFFFTAMLFVYGRILSQRLVNTVN 192

Query: 135 SDMVLYRLVSNLIKYHMVICYSLYIAGFMWFILTLKKKMYKYQFGQYAWTHMILIVVFGQ 194
           SD VLYRLVS+LIKYHMV+CYSLYI GF+WFILTLKKKMYKYQFGQYAWTHMILIVVFGQ
Sbjct: 193 SDKVLYRLVSSLIKYHMVVCYSLYITGFIWFILTLKKKMYKYQFGQYAWTHMILIVVFGQ 252

Query: 195 SSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASFTT 254
           SSFTV SIFEGIFWFLLPA+LIVINDIAAYIFGFFFG+TPLIKLSPKKTWEGFIGAS TT
Sbjct: 253 SSFTVPSIFEGIFWFLLPATLIVINDIAAYIFGFFFGKTPLIKLSPKKTWEGFIGASVTT 312

Query: 255 IISAFLLADILGHSQWLTCPRKDLSTGWLHCDPGPMFKPESYTLPGWISQWFGWKEVSIL 314
           IISAF+LA+I+G SQWLTCPRKDLSTGWL CDPG +FKPESY+L GW   WF WKE+SIL
Sbjct: 313 IISAFMLANIMGRSQWLTCPRKDLSTGWLDCDPGFLFKPESYSLLGWTPHWFPWKEISIL 372

Query: 315 PVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGMTDRMDCQMVMAVFA 374
           PVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGG+TDRMDCQMVMAVFA
Sbjct: 373 PVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGLTDRMDCQMVMAVFA 432

Query: 375 YIYXXXXXXXXXXXXETILDQILMNLTFDEQEALYRRLGEMLQQGIQRM 423
           YIY            E ILDQILM+L+F+EQEALYRRLGE+LQQGIQRM
Sbjct: 433 YIYHQSFVVPQSLSVEMILDQILMSLSFEEQEALYRRLGEVLQQGIQRM 481


>Medtr2g025550.2 | phosphatidate cytidylyltransferase family protein
           | HC | chr2:9141606-9135425 | 20130731
          Length = 443

 Score =  729 bits (1881), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 356/426 (83%), Positives = 378/426 (88%), Gaps = 18/426 (4%)

Query: 16  RIRHRKRSNEVIPEVSKANGT-KLLVNDKSKYKSMLIRAYSSIWMIGGFALIIYMGHLYI 74
           RIRHRKRSNEVIPEVSKANG+ +LLVNDKSKYKSMLIRAYSS+WMIG F LIIYMGHLYI
Sbjct: 17  RIRHRKRSNEVIPEVSKANGSGQLLVNDKSKYKSMLIRAYSSVWMIGSFVLIIYMGHLYI 76

Query: 75  TAMVVVIQIFMASELFNLLRRAHEDRQLPGFRLLNW-----------------HFFFTAM 117
           TAM+VVIQIFMA ELFNLLRRAHED+QLPGFRLLNW                 HFFFTAM
Sbjct: 77  TAMIVVIQIFMARELFNLLRRAHEDKQLPGFRLLNWAATSIIFAISRNTMFIWHFFFTAM 136

Query: 118 LFVYGRILNQRLANTVTSDMVLYRLVSNLIKYHMVICYSLYIAGFMWFILTLKKKMYKYQ 177
           LFVYGRIL+QRL NTV SD VLYRLVS+LIKYHMV+CYSLYI GF+WFILTLKKKMYKYQ
Sbjct: 137 LFVYGRILSQRLVNTVNSDKVLYRLVSSLIKYHMVVCYSLYITGFIWFILTLKKKMYKYQ 196

Query: 178 FGQYAWTHMILIVVFGQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIK 237
           FGQYAWTHMILIVVFGQSSFTV SIFEGIFWFLLPA+LIVINDIAAYIFGFFFG+TPLIK
Sbjct: 197 FGQYAWTHMILIVVFGQSSFTVPSIFEGIFWFLLPATLIVINDIAAYIFGFFFGKTPLIK 256

Query: 238 LSPKKTWEGFIGASFTTIISAFLLADILGHSQWLTCPRKDLSTGWLHCDPGPMFKPESYT 297
           LSPKKTWEGFIGAS TTIISAF+LA+I+G SQWLTCPRKDLSTGWL CDPG +FKPESY+
Sbjct: 257 LSPKKTWEGFIGASVTTIISAFMLANIMGRSQWLTCPRKDLSTGWLDCDPGFLFKPESYS 316

Query: 298 LPGWISQWFGWKEVSILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGH 357
           L GW   WF WKE+SILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGH
Sbjct: 317 LLGWTPHWFPWKEISILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGH 376

Query: 358 GGMTDRMDCQMVMAVFAYIYXXXXXXXXXXXXETILDQILMNLTFDEQEALYRRLGEMLQ 417
           GG+TDRMDCQMVMAVFAYIY            E ILDQILM+L+F+EQEALYRRLGE+LQ
Sbjct: 377 GGLTDRMDCQMVMAVFAYIYHQSFVVPQSLSVEMILDQILMSLSFEEQEALYRRLGEVLQ 436

Query: 418 QGIQRM 423
           QGIQRM
Sbjct: 437 QGIQRM 442


>Medtr5g093840.1 | phosphatidate cytidylyltransferase family protein
           | HC | chr5:40970176-40967574 | 20130731
          Length = 425

 Score =  608 bits (1567), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 299/415 (72%), Positives = 342/415 (82%)

Query: 4   DTSTSAPSNTSGRIRHRKRSNEVIPEVSKANGTKLLVNDKSKYKSMLIRAYSSIWMIGGF 63
           ++  S  S  +   R R+RSNE  PE+SK+NG  LLVNDK KY+SM IRAYSS+WM+   
Sbjct: 5   NSDNSCISPKTPNFRQRRRSNEFPPEISKSNGAILLVNDKYKYRSMWIRAYSSLWMLAFV 64

Query: 64  ALIIYMGHLYITAMVVVIQIFMASELFNLLRRAHEDRQLPGFRLLNWHFFFTAMLFVYGR 123
           +LIIYMGHLYI AMVVVIQIFMASELFNLLR A +D++LP F+LLNWHFFFTAML+VYGR
Sbjct: 65  SLIIYMGHLYIWAMVVVIQIFMASELFNLLRIASQDKRLPKFKLLNWHFFFTAMLYVYGR 124

Query: 124 ILNQRLANTVTSDMVLYRLVSNLIKYHMVICYSLYIAGFMWFILTLKKKMYKYQFGQYAW 183
           IL+Q L NTVTSD   YRLVSNLIKY MVICY LYIAGF+WFIL+LKK+ YKYQFGQYAW
Sbjct: 125 ILSQHLVNTVTSDKFFYRLVSNLIKYQMVICYFLYIAGFVWFILSLKKRYYKYQFGQYAW 184

Query: 184 THMILIVVFGQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKT 243
           THMILIVVF QS+FTVA+IF+GIFWFL PASLI +ND+AAY FGFFFG+TPLIKLSPKKT
Sbjct: 185 THMILIVVFTQSAFTVANIFQGIFWFLFPASLIAMNDVAAYFFGFFFGKTPLIKLSPKKT 244

Query: 244 WEGFIGASFTTIISAFLLADILGHSQWLTCPRKDLSTGWLHCDPGPMFKPESYTLPGWIS 303
           WEGFIGAS  T+I+AF  A+ LG   WLTCPRKDLSTGWL CDP P+FKPE   +PG++S
Sbjct: 245 WEGFIGASVATMIAAFTFANFLGRFNWLTCPRKDLSTGWLECDPDPIFKPEYIPMPGFVS 304

Query: 304 QWFGWKEVSILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGMTDR 363
            W   KE+++LPVQWHAL LGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGG TDR
Sbjct: 305 HWIPEKEIAVLPVQWHALWLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDR 364

Query: 364 MDCQMVMAVFAYIYXXXXXXXXXXXXETILDQILMNLTFDEQEALYRRLGEMLQQ 418
           MDCQMVMAVF YIY            + +LDQI+ +L F+EQ ALY RLG++L +
Sbjct: 365 MDCQMVMAVFVYIYHQSFIVPHDYTIDVLLDQIMRDLGFEEQLALYTRLGQILHE 419


>Medtr3g466380.1 | phosphatidate cytidylyltransferase family protein
           | HC | chr3:27266318-27272904 | 20130731
          Length = 380

 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 73/185 (39%), Gaps = 51/185 (27%)

Query: 193 GQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASF 252
           GQ+ +TV     G+   L+  S I+  D  A+I G  FGRTPL  +SPKKTWEG I    
Sbjct: 237 GQAHWTV-----GLVATLISISSIIAADTFAFIGGKAFGRTPLTSISPKKTWEGTIIGFC 291

Query: 253 TTIISAFLLADILGHSQWLTCPRKDLSTGWLHCDPGPMFKPESYTLPGWISQWFGWKEVS 312
             I ++ +L+ +     W   P   ++ G                               
Sbjct: 292 GCIATSVVLSKVF---SWPVSPLSAIALG------------------------------- 317

Query: 313 ILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGMTDRMDCQMVMAV 372
                     L  F S+   FG    S  KR   +KD G  IPGHGG+ DR D  +    
Sbjct: 318 ---------VLTFFGSV---FGDLTESMIKRDAGVKDSGSLIPGHGGVLDRADSYVFTGA 365

Query: 373 FAYIY 377
            AY +
Sbjct: 366 LAYSF 370


>Medtr3g466380.2 | phosphatidate cytidylyltransferase family protein
           | HC | chr3:27266318-27272904 | 20130731
          Length = 266

 Score = 62.0 bits (149), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 54/185 (29%), Positives = 73/185 (39%), Gaps = 51/185 (27%)

Query: 193 GQSSFTVASIFEGIFWFLLPASLIVINDIAAYIFGFFFGRTPLIKLSPKKTWEGFIGASF 252
           GQ+ +TV     G+   L+  S I+  D  A+I G  FGRTPL  +SPKKTWEG I    
Sbjct: 123 GQAHWTV-----GLVATLISISSIIAADTFAFIGGKAFGRTPLTSISPKKTWEGTIIGFC 177

Query: 253 TTIISAFLLADILGHSQWLTCPRKDLSTGWLHCDPGPMFKPESYTLPGWISQWFGWKEVS 312
             I ++ +L+ +     W   P   ++ G L                             
Sbjct: 178 GCIATSVVLSKVF---SWPVSPLSAIALGVLT---------------------------- 206

Query: 313 ILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGMTDRMDCQMVMAV 372
                        F S+   FG    S  KR   +KD G  IPGHGG+ DR D  +    
Sbjct: 207 ------------FFGSV---FGDLTESMIKRDAGVKDSGSLIPGHGGVLDRADSYVFTGA 251

Query: 373 FAYIY 377
            AY +
Sbjct: 252 LAYSF 256