Miyakogusa Predicted Gene
- Lj0g3v0269349.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0269349.1 tr|B9MZ67|B9MZ67_POPTR Chromatin remodeling
complex subunit OS=Populus trichocarpa GN=CHR952 PE=4
SV,49.15,0.000000000000001,seg,NULL; HELICASE_CTER,Helicase,
C-terminal; no description,NULL; SUBFAMILY NOT NAMED,NULL;
SWI/SNF,CUFF.17791.1
(846 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr2g095030.2 | helicase MOM1 | HC | chr2:40583580-40568105 | ... 732 0.0
Medtr2g095030.1 | helicase MOM1 | HC | chr2:40583548-40568105 | ... 720 0.0
Medtr7g101465.1 | SNF2 family amine-terminal protein | HC | chr7... 347 3e-95
Medtr4g096930.1 | chromatin remodeling complex subunit | HC | ch... 160 6e-39
Medtr1g013190.1 | chromatin remodeling factor CHD3 (pickle) | HC... 121 3e-27
Medtr3g106210.1 | CHD3-type chromatin-remodeling factor pickle p... 120 7e-27
Medtr3g106210.2 | CHD3-type chromatin-remodeling factor pickle p... 120 7e-27
Medtr3g106210.3 | CHD3-type chromatin-remodeling factor pickle p... 120 8e-27
Medtr3g106210.4 | CHD3-type chromatin-remodeling factor pickle p... 120 8e-27
Medtr3g106210.8 | CHD3-type chromatin-remodeling factor pickle p... 120 8e-27
Medtr3g106210.7 | CHD3-type chromatin-remodeling factor pickle p... 120 8e-27
Medtr3g106210.5 | CHD3-type chromatin-remodeling factor pickle p... 119 9e-27
Medtr3g106210.6 | CHD3-type chromatin-remodeling factor pickle p... 119 9e-27
Medtr8g008720.1 | hypothetical protein | LC | chr8:1873638-18747... 119 1e-26
Medtr4g118845.1 | chromatin remodeling factor, putative | HC | c... 117 6e-26
Medtr4g118845.2 | chromatin remodeling factor, putative | HC | c... 115 1e-25
Medtr5g090090.2 | chromodomain helicase-DNA-binding protein | HC... 111 3e-24
Medtr5g090090.1 | chromodomain helicase-DNA-binding protein | HC... 111 3e-24
Medtr2g094980.1 | chromatin remodeling complex subunit | LC | ch... 111 4e-24
Medtr3g053910.4 | chromodomain helicase DNA-binding protein, put... 109 1e-23
Medtr3g053910.2 | chromodomain helicase DNA-binding protein, put... 109 1e-23
Medtr3g053910.1 | chromodomain helicase DNA-binding protein, put... 109 1e-23
Medtr3g053910.3 | chromodomain helicase DNA-binding protein, put... 109 1e-23
Medtr4g058650.1 | hypothetical protein | HC | chr4:21566239-2157... 108 2e-23
Medtr4g058650.2 | hypothetical protein | HC | chr4:21567087-2157... 108 3e-23
Medtr2g020000.1 | chromatin remodeling factor, putative | HC | c... 102 1e-21
Medtr5g005840.1 | chromatin remodeling factor, putative | HC | c... 99 2e-20
Medtr1g105050.1 | chromatin remodeling factor, putative | HC | c... 99 2e-20
Medtr7g039320.1 | chromodomain helicase-DNA-binding-like protein... 93 1e-18
Medtr7g039320.2 | chromodomain helicase-DNA-binding-like protein... 93 1e-18
Medtr4g118720.1 | SNF2 family amine-terminal protein | HC | chr4... 92 3e-18
Medtr7g045505.1 | Nodule-specific Glycine Rich Peptide | HC | ch... 90 1e-17
Medtr7g045505.2 | Nodule-specific Glycine Rich Peptide | HC | ch... 89 1e-17
Medtr5g020000.1 | chromatin-remodeling complex ATPase chain, put... 83 1e-15
Medtr1g053955.1 | helicase | HC | chr1:22924323-22942659 | 20130731 82 2e-15
Medtr7g090960.1 | DNA helicase INO80-like protein | HC | chr7:35... 74 8e-13
Medtr7g090960.2 | DNA helicase INO80-like protein | HC | chr7:35... 74 9e-13
Medtr5g004720.1 | DNA repair and recombination RAD54-like protei... 74 9e-13
Medtr1g069755.1 | DNA repair and recombination protein RAD26 | H... 73 1e-12
Medtr7g078090.1 | ATP-dependent helicase BRM | HC | chr7:2951348... 73 1e-12
Medtr8g030550.1 | ATP-dependent helicase BRM | HC | chr8:1127948... 72 2e-12
Medtr8g030550.2 | ATP-dependent helicase BRM | HC | chr8:1127948... 72 3e-12
Medtr8g030550.3 | ATP-dependent helicase BRM | HC | chr8:1127948... 72 3e-12
Medtr4g078495.1 | DNA repair and recombination RAD26-like protei... 57 1e-07
Medtr4g078460.1 | DNA repair and recombination RAD26-like protei... 56 2e-07
Medtr4g035100.3 | TATA-binding protein associated factor-like pr... 54 5e-07
Medtr4g035100.1 | TATA-binding protein associated factor-like pr... 54 5e-07
Medtr4g035100.2 | TATA-binding protein associated factor-like pr... 54 5e-07
Medtr1g035330.1 | ATP-dependent helicase family protein | HC | c... 51 5e-06
Medtr3g071860.1 | chromatin remodeling complex subunit | HC | ch... 50 8e-06
>Medtr2g095030.2 | helicase MOM1 | HC | chr2:40583580-40568105 |
20130731
Length = 2096
Score = 732 bits (1890), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 413/759 (54%), Positives = 500/759 (65%), Gaps = 71/759 (9%)
Query: 132 KEVNQSEEHDPETLQVKVKRMDARMYRSLFKKPKE----GSSVPSNTPTNETCMVPESVQ 187
KEV+++ E + K R+++R+ + + GS +PSNTPT ET +VP VQ
Sbjct: 363 KEVSKNGTLTSEDAKAKETRVNSRLSGPMTDLAENCATPGSFIPSNTPTYETSVVPRRVQ 422
Query: 188 PNFSGEETLQMSMSNSIL--DGELVRN--GHDGGEMSILSKRKGMTVDMDSDPSASLSKD 243
P+ GEETL +S + D +LV N G GGE SKRK +T+D+DS+ +SLSK
Sbjct: 423 PDCCGEETLPTLVSGDSVFDDDDLVNNNAGLGGGEKLAPSKRKAITMDIDSNVPSSLSKG 482
Query: 244 DNCNFIPNASPSMSDGNVIGTDGPYSKRVRLDYNPKVNESCNPSATEE------------ 291
D+ N IP+A PS +G + SKR+RLD+NP V ES +P ATE+
Sbjct: 483 DSSNLIPDALPSK-----LGGNESCSKRIRLDFNPTVEESRDPCATEDIDVIEATMQQKD 537
Query: 292 -------------NIVGNINIPALLDSQSNNEKYGLNPNSDDSAFQLKDRLSSDIASRCK 338
V + NI ALLDSQS K+++SS IA+RCK
Sbjct: 538 KSDHASGTGHLKGTTVEDKNIHALLDSQS--------------VVHPKEKVSSHIANRCK 583
Query: 339 SDSCRFVEYWVPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHP 398
SDS + VEYWVPVQIS+VQLEQYC LL NA L SS K+DSVGAIRD+LISIRKCCNHP
Sbjct: 584 SDSYKLVEYWVPVQISNVQLEQYCNTLLSNASFLCSSPKIDSVGAIRDVLISIRKCCNHP 643
Query: 399 YVVDEHLQRLLWEGLKPDEF----------LGVDIKASGKLQLLDSMLMELKKKDLRTLI 448
Y+++E LQ LL +G++ E+ L V IKAS KLQLLDSML EL+K LR LI
Sbjct: 644 YIIEESLQPLLLKGIEEVEYPSQKEKAVAYLNVGIKASSKLQLLDSMLTELRKNKLRALI 703
Query: 449 LFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFL 508
LFQ IG SG+ I DILDDFLRQRFG DSYERID L SKK AA K FNDKNN+RFFFL
Sbjct: 704 LFQPIGVSGKTSIVDILDDFLRQRFGEDSYERIDNCLTASKKQAATKIFNDKNNKRFFFL 763
Query: 509 LETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEER 568
+ET AC PSIKLSS+D IIIFDSDWNP+NDIRSLQK+TLDSQ++ IK FRLYS FTVEE+
Sbjct: 764 METSACHPSIKLSSIDAIIIFDSDWNPMNDIRSLQKLTLDSQFESIKTFRLYSPFTVEEK 823
Query: 569 ALSFAKQDKTLDINLQNMNRGISHMLLMWSAPCLFDELKVFHDDAASTPSLKSLFGQPLL 628
AL ++Q KTLDIN + +RG+SH LLMW A LFDEL+VFHD A ST +LK PLL
Sbjct: 824 ALILSRQGKTLDINCPSSSRGLSHTLLMWGAVHLFDELRVFHDGATSTSNLK-----PLL 878
Query: 629 KQAIDEFRSVLSQDGEDTDANNCSILLKVKVQQKELTYRGHFSLLGELKIGLLDEEAPQI 688
++ + +F S L+ GED+D +NCSILL KVQQ Y + L GEL+ DEE+PQ
Sbjct: 879 EETVSQFSSCLADVGEDSDTSNCSILL--KVQQHGGAYLANSPLFGELEFRSPDEESPQK 936
Query: 689 FWPKLLEGKHFCWKYSSNLFQRSRKKVHYFNGSVDRPDAVTEGILKKRKKVSSNVVDHPS 748
FW LL G+ F WKYS QRSR++V FN D V EG KKR KVS+N VD PS
Sbjct: 937 FWNNLLVGRQFQWKYSCGSTQRSRRRVQPFNNLAGGTDLVNEGTTKKRLKVSNNNVDQPS 996
Query: 749 SKSEDENLSNGIKEGASGDLVDRPHVN-VVESEKKGTVHGEQRSSHLLLKPEITKLCEVL 807
SKS E L NGIK G DLVD+P N VES K G VH E RS HL LKP+IT+LCEVL
Sbjct: 997 SKSVGEKLPNGIKAGTFVDLVDKPQGNDDVESGKNGRVHDELRSLHLSLKPQITELCEVL 1056
Query: 808 LLPDTVKSMVDNFLQYVMNNHHITRESVPLLQAFQLSLV 846
LLPD V+++VDNFL+YV N HH ESV +Q+FQ+SL+
Sbjct: 1057 LLPDNVRNVVDNFLEYVTNKHHFNWESVS-IQSFQISLI 1094
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 97/172 (56%), Gaps = 7/172 (4%)
Query: 1 MGNGTRSSQRAKDGENYNERMKQDSEKGKISPSPTESDTTGVRRSARETXXXXXXXXXXX 60
M TRSSQ+AKD EN N R+ + SEK KI P SDT G+R+S+RE
Sbjct: 1 MVKSTRSSQKAKDEENNNGRVTRSSEKAKIKAHPNVSDTAGIRKSSRE-KPSKIIATSSS 59
Query: 61 ARKSERLEKGTPPSPAVSKKSERVEKKNMPSPLRRSGRARGQX------XXXXXXXXXXX 114
+KSE++EKGT P+P +KS RVEK PSPL RSG+ R
Sbjct: 60 TQKSEQVEKGTLPAPETRRKSVRVEKMKTPSPLTRSGKTRNHSFSGPSDSKSAGSLGSIS 119
Query: 115 XXXXXXXXXVKQVTLEAKEVNQSEEHDPETLQVKVKRMDARMYRSLFKKPKE 166
VK +T EAKEVN++EEH+ E+ QVK K+M A MYRSLF +PK+
Sbjct: 120 RQKLQKEKSVKHLTFEAKEVNENEEHNRESSQVKRKKMTALMYRSLFTQPKK 171
>Medtr2g095030.1 | helicase MOM1 | HC | chr2:40583548-40568105 |
20130731
Length = 2089
Score = 720 bits (1858), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 409/759 (53%), Positives = 496/759 (65%), Gaps = 78/759 (10%)
Query: 132 KEVNQSEEHDPETLQVKVKRMDARMYRSLFKKPKE----GSSVPSNTPTNETCMVPESVQ 187
KEV+++ E + K R+++R+ + + GS +PSNTPT ET +VP VQ
Sbjct: 363 KEVSKNGTLTSEDAKAKETRVNSRLSGPMTDLAENCATPGSFIPSNTPTYETSVVPRRVQ 422
Query: 188 PNFSGEETLQMSMSNSIL--DGELVRN--GHDGGEMSILSKRKGMTVDMDSDPSASLSKD 243
P+ GEETL +S + D +LV N G GGE SKRK +T+D+DS+ +SLSK
Sbjct: 423 PDCCGEETLPTLVSGDSVFDDDDLVNNNAGLGGGEKLAPSKRKAITMDIDSNVPSSLSKG 482
Query: 244 DNCNFIPNASPSMSDGNVIGTDGPYSKRVRLDYNPKVNESCNPSATEE------------ 291
D+ N IP+A PS +G + SKR+RLD+NP V ES +P ATE+
Sbjct: 483 DSSNLIPDALPSK-----LGGNESCSKRIRLDFNPTVEESRDPCATEDIDVIEATMQQKD 537
Query: 292 -------------NIVGNINIPALLDSQSNNEKYGLNPNSDDSAFQLKDRLSSDIASRCK 338
V + NI ALLDSQS K+++SS IA+RCK
Sbjct: 538 KSDHASGTGHLKGTTVEDKNIHALLDSQS--------------VVHPKEKVSSHIANRCK 583
Query: 339 SDSCRFVEYWVPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHP 398
SDS + VEYWVPVQIS+VQLEQYC LL NA L SS K+DSVGAIRD+LISIRKCCNHP
Sbjct: 584 SDSYKLVEYWVPVQISNVQLEQYCNTLLSNASFLCSSPKIDSVGAIRDVLISIRKCCNHP 643
Query: 399 YVVDEHLQRLLWEGLKPDEF----------LGVDIKASGKLQLLDSMLMELKKKDLRTLI 448
Y+++E LQ LL +G++ E+ L V IKAS KLQLLDSML EL+K LR LI
Sbjct: 644 YIIEESLQPLLLKGIEEVEYPSQKEKAVAYLNVGIKASSKLQLLDSMLTELRKNKLRALI 703
Query: 449 LFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFL 508
LFQ IG SG+ I DILDDFLRQRFG DSYERID L SKK AA K FNDKNN+RFFFL
Sbjct: 704 LFQPIGVSGKTSIVDILDDFLRQRFGEDSYERIDNCLTASKKQAATKIFNDKNNKRFFFL 763
Query: 509 LETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEER 568
+ET AC PSIKLSS+D IIIFDSDWNP+NDIRSLQK+TLDSQ++ IK FRLYS FTVEE+
Sbjct: 764 METSACHPSIKLSSIDAIIIFDSDWNPMNDIRSLQKLTLDSQFESIKTFRLYSPFTVEEK 823
Query: 569 ALSFAKQDKTLDINLQNMNRGISHMLLMWSAPCLFDELKVFHDDAASTPSLKSLFGQPLL 628
AL ++Q KTLDIN + +RG+SH LLMW A LFDEL+VFHD A ST +LK PLL
Sbjct: 824 ALILSRQGKTLDINCPSSSRGLSHTLLMWGAVHLFDELRVFHDGATSTSNLK-----PLL 878
Query: 629 KQAIDEFRSVLSQDGEDTDANNCSILLKVKVQQKELTYRGHFSLLGELKIGLLDEEAPQI 688
++ + +F S L+ GED+D +NCSILL KVQQ Y + L GEL+ DEE+PQ
Sbjct: 879 EETVSQFSSCLADVGEDSDTSNCSILL--KVQQHGGAYLANSPLFGELEFRSPDEESPQK 936
Query: 689 FWPKLLEGKHFCWKYSSNLFQRSRKKVHYFNGSVDRPDAVTEGILKKRKKVSSNVVDHPS 748
FW LL G+ F WKYS QRSR++V FN D V EG KKR KVS+N VD PS
Sbjct: 937 FWNNLLVGRQFQWKYSCGSTQRSRRRVQPFNNLAGGTDLVNEGTTKKRLKVSNNNVDQPS 996
Query: 749 SKSEDENLSNGIKEGASGDLVDRPHVN-VVESEKKGTVHGEQRSSHLLLKPEITKLCEVL 807
SKS E L NGIK D+P N VES K G VH E RS HL LKP+IT+LCEVL
Sbjct: 997 SKSVGEKLPNGIK-------ADKPQGNDDVESGKNGRVHDELRSLHLSLKPQITELCEVL 1049
Query: 808 LLPDTVKSMVDNFLQYVMNNHHITRESVPLLQAFQLSLV 846
LLPD V+++VDNFL+YV N HH ESV +Q+FQ+SL+
Sbjct: 1050 LLPDNVRNVVDNFLEYVTNKHHFNWESVS-IQSFQISLI 1087
Score = 129 bits (324), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 97/172 (56%), Gaps = 7/172 (4%)
Query: 1 MGNGTRSSQRAKDGENYNERMKQDSEKGKISPSPTESDTTGVRRSARETXXXXXXXXXXX 60
M TRSSQ+AKD EN N R+ + SEK KI P SDT G+R+S+RE
Sbjct: 1 MVKSTRSSQKAKDEENNNGRVTRSSEKAKIKAHPNVSDTAGIRKSSRE-KPSKIIATSSS 59
Query: 61 ARKSERLEKGTPPSPAVSKKSERVEKKNMPSPLRRSGRARGQX------XXXXXXXXXXX 114
+KSE++EKGT P+P +KS RVEK PSPL RSG+ R
Sbjct: 60 TQKSEQVEKGTLPAPETRRKSVRVEKMKTPSPLTRSGKTRNHSFSGPSDSKSAGSLGSIS 119
Query: 115 XXXXXXXXXVKQVTLEAKEVNQSEEHDPETLQVKVKRMDARMYRSLFKKPKE 166
VK +T EAKEVN++EEH+ E+ QVK K+M A MYRSLF +PK+
Sbjct: 120 RQKLQKEKSVKHLTFEAKEVNENEEHNRESSQVKRKKMTALMYRSLFTQPKK 171
>Medtr7g101465.1 | SNF2 family amine-terminal protein | HC |
chr7:40992544-40978617 | 20130731
Length = 1511
Score = 347 bits (889), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 214/564 (37%), Positives = 310/564 (54%), Gaps = 43/564 (7%)
Query: 318 SDDSAFQLKDRLSSDIASRCKSDSCRFVEYWVPVQISDVQLEQYCAILLKNAEILRSSSK 377
S S L+ L +C S S RF+EYWVP Q S +QL+QYC++LL N+ +L S +
Sbjct: 465 SSASISNLQSELEQYTVLKCNSVSSRFIEYWVPAQFSSMQLKQYCSMLLSNSMLLCSGQR 524
Query: 378 VDSVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLM 437
DSVGA+R+++IS +KCCNHPY+++ L L+ GL +E + IKASGKLQLL+ +L
Sbjct: 525 SDSVGALRELVISTKKCCNHPYLLNPSLNNLVTRGLPVEEHFNIGIKASGKLQLLEKILF 584
Query: 438 ELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKF 497
E K + LR +ILFQS GS IGDILDD L RFG D Y R K PSK AA+ F
Sbjct: 585 EAKSRKLRVIILFQSSCGSRS--IGDILDDVLCHRFGEDCYVRYCKDYIPSKNQAALDTF 642
Query: 498 NDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMF 557
ND+ + +F FL+E AC SIKLSSVDTII+FDSD +P ND++ +QK+++ S +K + +
Sbjct: 643 NDRESGKFVFLIENRACTSSIKLSSVDTIILFDSDLDPQNDLKCVQKMSISSNFKQLTVL 702
Query: 558 RLYSAFTVEERALSFAKQDKTLDINLQNMNRGISHMLLMWSAPCLFDELKVFHDDAASTP 617
RLYS TVEE+ L+ AK+ LD N+Q +N+ H LL W A LF + H S
Sbjct: 703 RLYSYLTVEEKVLALAKEGIALDRNMQ-LNQSSIHTLLKWGASYLFSKFDDLHGSGTSV- 760
Query: 618 SLKSLFGQPLLKQAIDEFRSVLSQDGEDTDANNCSILLKVKVQQKELTYRGHFSLLGELK 677
S + Q +L I E L+ D + T ++ S + +VK E Y + SLLGE +
Sbjct: 761 SASGISDQSILNDVICELSCKLASDSDATHSHRQSFISRVKQNGGE--YARNISLLGERE 818
Query: 678 IGLLDEEAPQIFWPKLLEGKHFCWKYSSNLFQRSRKKVHYFNGSVDRPDAVTEGILKK-- 735
+ L + W LL+G+ W + QR RK V +F + P + I++K
Sbjct: 819 MMKLGNDTHTFSWSDLLKGRKPHWNFLPVSSQRIRKTVEHFPHTAKGPKQENDAIIRKKR 878
Query: 736 ----------RKKVSSNVVDHPSSKSEDENLSNGIKEGASGDLVDRPHVN---------- 775
RK VS + VD + +N+ + + S ++VD H+
Sbjct: 879 TESKDNVFPIRKNVSKDNVDPEKREITKDNI-DPKRRKLSKEIVDSKHLRKKWMNKKSRS 937
Query: 776 ------------VVESE--KKGTVHGEQRSSHLLLKPEITKLCEVLLLPDTVKSMVDNFL 821
V++ + K+ +HG +S+ LL KP+I+ LC+VL VK++ L
Sbjct: 938 AGKRKGKFNGAAVMKKQIPKQKKLHGMPKSTKLLSKPDISGLCDVLHFSKNVKAVAIRIL 997
Query: 822 QYVMNNHHITRESVPLLQAFQLSL 845
+YV N++I V +QAF++S+
Sbjct: 998 EYVFENYNINCREVSTVQAFEISV 1021
>Medtr4g096930.1 | chromatin remodeling complex subunit | HC |
chr4:38597416-38612562 | 20130731
Length = 2317
Score = 160 bits (404), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 171/317 (53%), Gaps = 27/317 (8%)
Query: 300 PALLDSQSNNEKYGLNPNSDDSAFQLKDRLSSDIASRCKSDSCRFV----EYWVPVQISD 355
PA S S E+ + S + +LK +S + R K D+ + + E VPV++S
Sbjct: 922 PASFPSLSAFEERFNDLTSAEKVDELKKLVSPHMLRRLKKDAMQNIPPKTERMVPVELSS 981
Query: 356 VQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKP 415
+Q E Y A+L KN +ILR+ K + ++ +I++ +RK CNHPY++ G +P
Sbjct: 982 IQAEYYRAMLTKNYQILRNIGKGIAQQSMLNIVMQLRKVCNHPYLI---------PGTEP 1032
Query: 416 D----EFLG-VDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLR 470
D EFL + IKAS KL LL SML L K+ R LI Q + DIL+D+L
Sbjct: 1033 DSGSVEFLHEMRIKASAKLTLLHSMLKILYKEGHRVLIFSQMTK------LLDILEDYLN 1086
Query: 471 QRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFD 530
FGP +YER+D S+ + + A+ +FN ++ RF FLL T +C I L++ DT+II+D
Sbjct: 1087 IEFGPKTYERVDGSVSVTDRQTAIARFN-QDKSRFVFLLSTRSCGLGINLATADTVIIYD 1145
Query: 531 SDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLDINLQNMNRGI 590
SD+NP DI+++ + Q + ++RL +VEER L AK+ LD + +
Sbjct: 1146 SDFNPHADIQAMNRAHRIGQSNRLLVYRLVVRASVEERILQLAKKKLMLDQLFKGKSGSQ 1205
Query: 591 SHM--LLMWSAPCLFDE 605
+ +L W LF++
Sbjct: 1206 KEVEDILKWGTEELFND 1222
>Medtr1g013190.1 | chromatin remodeling factor CHD3 (pickle) | HC |
chr1:2920951-2909567 | 20130731
Length = 1302
Score = 121 bits (304), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 135/242 (55%), Gaps = 28/242 (11%)
Query: 346 EYWVPVQISDVQLEQYCAILLKNAEIL--RSSSKVDSVGAIRDILISIRKCCNHPYVVDE 403
E + V++S Q E Y AIL +N +IL R +++ ++ ++++ +RK C HPY++
Sbjct: 533 ELIIRVELSSKQREYYKAILTRNYDILTRRGGAQI----SLNNVVMQLRKLCCHPYML-- 586
Query: 404 HLQRLLWEGLKP-----DEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGR 458
EG++P E +++SGKLQLLD ++M+LK++ R LI Q G
Sbjct: 587 -------EGVEPVLHKETEAYKQMLESSGKLQLLDKLMMKLKEQGHRVLIFSQFQG---- 635
Query: 459 DLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSI 518
I ++L+ + + YERID ++ ++ + +FN +++ RF FLL T A I
Sbjct: 636 --ILNMLESYCVYKHW--QYERIDGNVDGDERQVRIDRFNAEDSSRFCFLLSTRAGGLGI 691
Query: 519 KLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKT 578
L++ DT+II+DSDWNP D++++ + Q + +FRL + T+EER + K+
Sbjct: 692 NLATADTVIIYDSDWNPHADLQAMARAHRVGQTNKVLIFRLITRGTIEERMMEITKKKMV 751
Query: 579 LD 580
L+
Sbjct: 752 LE 753
>Medtr3g106210.1 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033785-49052883 | 20130731
Length = 1412
Score = 120 bits (300), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 167/327 (51%), Gaps = 45/327 (13%)
Query: 317 NSDDSAFQLKDRLSSDIASRCKSDSCRFV----EYWVPVQISDVQLEQYCAILLKNAEIL 372
N ++ +L L+ + R K D + + E + V +S Q E Y AIL +N +IL
Sbjct: 502 NQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVDLSSKQKEYYKAILTRNYQIL 561
Query: 373 --RSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPD-----EFLGVDIKA 425
R +++ ++ ++++ +RK C H Y++ EG++PD E +++
Sbjct: 562 TRRGGAQI----SLINVVMELRKLCCHAYML---------EGVEPDIDDPKEAFKQLLES 608
Query: 426 SGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSL 485
SGKL LLD M+++LK++ R LI Q + D+L+D+ + YERID +
Sbjct: 609 SGKLHLLDKMMVKLKEQGHRVLIYSQF------QHMLDLLEDYCS--YKKWHYERIDGKV 660
Query: 486 PPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKI 545
+++ + +FN KN+ RF FLL T A I L++ DT++I+DSDWNP D++++ +
Sbjct: 661 GGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADLQAMARA 720
Query: 546 TLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD------INLQNMNRGISHMLLMWSA 599
Q + ++RL + T+EER + K+ L+ + QN+N+ ++ + +
Sbjct: 721 HRLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNINQEELDDIIRYGS 780
Query: 600 PCLF----DEL---KVFHDDAASTPSL 619
LF DE + H DAA+ L
Sbjct: 781 KELFADENDEAGKSRQIHYDAAAIDRL 807
>Medtr3g106210.2 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033785-49052883 | 20130731
Length = 1412
Score = 120 bits (300), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 167/327 (51%), Gaps = 45/327 (13%)
Query: 317 NSDDSAFQLKDRLSSDIASRCKSDSCRFV----EYWVPVQISDVQLEQYCAILLKNAEIL 372
N ++ +L L+ + R K D + + E + V +S Q E Y AIL +N +IL
Sbjct: 502 NQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVDLSSKQKEYYKAILTRNYQIL 561
Query: 373 --RSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPD-----EFLGVDIKA 425
R +++ ++ ++++ +RK C H Y++ EG++PD E +++
Sbjct: 562 TRRGGAQI----SLINVVMELRKLCCHAYML---------EGVEPDIDDPKEAFKQLLES 608
Query: 426 SGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSL 485
SGKL LLD M+++LK++ R LI Q + D+L+D+ + YERID +
Sbjct: 609 SGKLHLLDKMMVKLKEQGHRVLIYSQF------QHMLDLLEDYCS--YKKWHYERIDGKV 660
Query: 486 PPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKI 545
+++ + +FN KN+ RF FLL T A I L++ DT++I+DSDWNP D++++ +
Sbjct: 661 GGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADLQAMARA 720
Query: 546 TLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD------INLQNMNRGISHMLLMWSA 599
Q + ++RL + T+EER + K+ L+ + QN+N+ ++ + +
Sbjct: 721 HRLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNINQEELDDIIRYGS 780
Query: 600 PCLF----DEL---KVFHDDAASTPSL 619
LF DE + H DAA+ L
Sbjct: 781 KELFADENDEAGKSRQIHYDAAAIDRL 807
>Medtr3g106210.3 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033778-49052884 | 20130731
Length = 1411
Score = 120 bits (300), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 167/327 (51%), Gaps = 45/327 (13%)
Query: 317 NSDDSAFQLKDRLSSDIASRCKSDSCRFV----EYWVPVQISDVQLEQYCAILLKNAEIL 372
N ++ +L L+ + R K D + + E + V +S Q E Y AIL +N +IL
Sbjct: 502 NQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVDLSSKQKEYYKAILTRNYQIL 561
Query: 373 --RSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPD-----EFLGVDIKA 425
R +++ ++ ++++ +RK C H Y++ EG++PD E +++
Sbjct: 562 TRRGGAQI----SLINVVMELRKLCCHAYML---------EGVEPDIDDPKEAFKQLLES 608
Query: 426 SGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSL 485
SGKL LLD M+++LK++ R LI Q + D+L+D+ + YERID +
Sbjct: 609 SGKLHLLDKMMVKLKEQGHRVLIYSQF------QHMLDLLEDYCS--YKKWHYERIDGKV 660
Query: 486 PPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKI 545
+++ + +FN KN+ RF FLL T A I L++ DT++I+DSDWNP D++++ +
Sbjct: 661 GGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADLQAMARA 720
Query: 546 TLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD------INLQNMNRGISHMLLMWSA 599
Q + ++RL + T+EER + K+ L+ + QN+N+ ++ + +
Sbjct: 721 HRLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNINQEELDDIIRYGS 780
Query: 600 PCLF----DEL---KVFHDDAASTPSL 619
LF DE + H DAA+ L
Sbjct: 781 KELFADENDEAGKSRQIHYDAAAIDRL 807
>Medtr3g106210.4 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033778-49052884 | 20130731
Length = 1411
Score = 120 bits (300), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 167/327 (51%), Gaps = 45/327 (13%)
Query: 317 NSDDSAFQLKDRLSSDIASRCKSDSCRFV----EYWVPVQISDVQLEQYCAILLKNAEIL 372
N ++ +L L+ + R K D + + E + V +S Q E Y AIL +N +IL
Sbjct: 502 NQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVDLSSKQKEYYKAILTRNYQIL 561
Query: 373 --RSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPD-----EFLGVDIKA 425
R +++ ++ ++++ +RK C H Y++ EG++PD E +++
Sbjct: 562 TRRGGAQI----SLINVVMELRKLCCHAYML---------EGVEPDIDDPKEAFKQLLES 608
Query: 426 SGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSL 485
SGKL LLD M+++LK++ R LI Q + D+L+D+ + YERID +
Sbjct: 609 SGKLHLLDKMMVKLKEQGHRVLIYSQF------QHMLDLLEDYCS--YKKWHYERIDGKV 660
Query: 486 PPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKI 545
+++ + +FN KN+ RF FLL T A I L++ DT++I+DSDWNP D++++ +
Sbjct: 661 GGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADLQAMARA 720
Query: 546 TLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD------INLQNMNRGISHMLLMWSA 599
Q + ++RL + T+EER + K+ L+ + QN+N+ ++ + +
Sbjct: 721 HRLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNINQEELDDIIRYGS 780
Query: 600 PCLF----DEL---KVFHDDAASTPSL 619
LF DE + H DAA+ L
Sbjct: 781 KELFADENDEAGKSRQIHYDAAAIDRL 807
>Medtr3g106210.8 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033778-49052884 | 20130731
Length = 1238
Score = 120 bits (300), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 166/327 (50%), Gaps = 45/327 (13%)
Query: 317 NSDDSAFQLKDRLSSDIASRCKSDSCRFV----EYWVPVQISDVQLEQYCAILLKNAEIL 372
N ++ +L L+ + R K D + + E + V +S Q E Y AIL +N +IL
Sbjct: 502 NQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVDLSSKQKEYYKAILTRNYQIL 561
Query: 373 --RSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPD-----EFLGVDIKA 425
R +++ + ++++ +RK C H Y++ EG++PD E +++
Sbjct: 562 TRRGGAQISLI----NVVMELRKLCCHAYML---------EGVEPDIDDPKEAFKQLLES 608
Query: 426 SGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSL 485
SGKL LLD M+++LK++ R LI Q + D+L+D+ + YERID +
Sbjct: 609 SGKLHLLDKMMVKLKEQGHRVLIYSQF------QHMLDLLEDYCS--YKKWHYERIDGKV 660
Query: 486 PPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKI 545
+++ + +FN KN+ RF FLL T A I L++ DT++I+DSDWNP D++++ +
Sbjct: 661 GGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADLQAMARA 720
Query: 546 TLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD------INLQNMNRGISHMLLMWSA 599
Q + ++RL + T+EER + K+ L+ + QN+N+ ++ + +
Sbjct: 721 HRLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNINQEELDDIIRYGS 780
Query: 600 PCLF----DEL---KVFHDDAASTPSL 619
LF DE + H DAA+ L
Sbjct: 781 KELFADENDEAGKSRQIHYDAAAIDRL 807
>Medtr3g106210.7 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033778-49052884 | 20130731
Length = 1238
Score = 120 bits (300), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 166/327 (50%), Gaps = 45/327 (13%)
Query: 317 NSDDSAFQLKDRLSSDIASRCKSDSCRFV----EYWVPVQISDVQLEQYCAILLKNAEIL 372
N ++ +L L+ + R K D + + E + V +S Q E Y AIL +N +IL
Sbjct: 502 NQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVDLSSKQKEYYKAILTRNYQIL 561
Query: 373 --RSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPD-----EFLGVDIKA 425
R +++ + ++++ +RK C H Y++ EG++PD E +++
Sbjct: 562 TRRGGAQISLI----NVVMELRKLCCHAYML---------EGVEPDIDDPKEAFKQLLES 608
Query: 426 SGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSL 485
SGKL LLD M+++LK++ R LI Q + D+L+D+ + YERID +
Sbjct: 609 SGKLHLLDKMMVKLKEQGHRVLIYSQF------QHMLDLLEDYCS--YKKWHYERIDGKV 660
Query: 486 PPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKI 545
+++ + +FN KN+ RF FLL T A I L++ DT++I+DSDWNP D++++ +
Sbjct: 661 GGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADLQAMARA 720
Query: 546 TLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD------INLQNMNRGISHMLLMWSA 599
Q + ++RL + T+EER + K+ L+ + QN+N+ ++ + +
Sbjct: 721 HRLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNINQEELDDIIRYGS 780
Query: 600 PCLF----DEL---KVFHDDAASTPSL 619
LF DE + H DAA+ L
Sbjct: 781 KELFADENDEAGKSRQIHYDAAAIDRL 807
>Medtr3g106210.5 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033785-49052883 | 20130731
Length = 1239
Score = 119 bits (299), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 166/327 (50%), Gaps = 45/327 (13%)
Query: 317 NSDDSAFQLKDRLSSDIASRCKSDSCRFV----EYWVPVQISDVQLEQYCAILLKNAEIL 372
N ++ +L L+ + R K D + + E + V +S Q E Y AIL +N +IL
Sbjct: 502 NQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVDLSSKQKEYYKAILTRNYQIL 561
Query: 373 --RSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPD-----EFLGVDIKA 425
R +++ + ++++ +RK C H Y++ EG++PD E +++
Sbjct: 562 TRRGGAQISLI----NVVMELRKLCCHAYML---------EGVEPDIDDPKEAFKQLLES 608
Query: 426 SGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSL 485
SGKL LLD M+++LK++ R LI Q + D+L+D+ + YERID +
Sbjct: 609 SGKLHLLDKMMVKLKEQGHRVLIYSQF------QHMLDLLEDYCS--YKKWHYERIDGKV 660
Query: 486 PPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKI 545
+++ + +FN KN+ RF FLL T A I L++ DT++I+DSDWNP D++++ +
Sbjct: 661 GGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADLQAMARA 720
Query: 546 TLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD------INLQNMNRGISHMLLMWSA 599
Q + ++RL + T+EER + K+ L+ + QN+N+ ++ + +
Sbjct: 721 HRLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNINQEELDDIIRYGS 780
Query: 600 PCLF----DEL---KVFHDDAASTPSL 619
LF DE + H DAA+ L
Sbjct: 781 KELFADENDEAGKSRQIHYDAAAIDRL 807
>Medtr3g106210.6 | CHD3-type chromatin-remodeling factor pickle
protein | HC | chr3:49033785-49052883 | 20130731
Length = 1239
Score = 119 bits (299), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 95/327 (29%), Positives = 166/327 (50%), Gaps = 45/327 (13%)
Query: 317 NSDDSAFQLKDRLSSDIASRCKSDSCRFV----EYWVPVQISDVQLEQYCAILLKNAEIL 372
N ++ +L L+ + R K D + + E + V +S Q E Y AIL +N +IL
Sbjct: 502 NQEEQISRLHKMLAPHLLRRVKKDVMKELPPKKELILRVDLSSKQKEYYKAILTRNYQIL 561
Query: 373 --RSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPD-----EFLGVDIKA 425
R +++ + ++++ +RK C H Y++ EG++PD E +++
Sbjct: 562 TRRGGAQISLI----NVVMELRKLCCHAYML---------EGVEPDIDDPKEAFKQLLES 608
Query: 426 SGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSL 485
SGKL LLD M+++LK++ R LI Q + D+L+D+ + YERID +
Sbjct: 609 SGKLHLLDKMMVKLKEQGHRVLIYSQF------QHMLDLLEDYCS--YKKWHYERIDGKV 660
Query: 486 PPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKI 545
+++ + +FN KN+ RF FLL T A I L++ DT++I+DSDWNP D++++ +
Sbjct: 661 GGAERQIRIDRFNAKNSSRFCFLLSTRAGGLGINLATADTVVIYDSDWNPHADLQAMARA 720
Query: 546 TLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD------INLQNMNRGISHMLLMWSA 599
Q + ++RL + T+EER + K+ L+ + QN+N+ ++ + +
Sbjct: 721 HRLGQTNKVLIYRLITRGTIEERMMQMTKKKMVLEHLVVGRLKAQNINQEELDDIIRYGS 780
Query: 600 PCLF----DEL---KVFHDDAASTPSL 619
LF DE + H DAA+ L
Sbjct: 781 KELFADENDEAGKSRQIHYDAAAIDRL 807
>Medtr8g008720.1 | hypothetical protein | LC | chr8:1873638-1874776
| 20130731
Length = 167
Score = 119 bits (299), Expect = 1e-26, Method: Composition-based stats.
Identities = 69/139 (49%), Positives = 75/139 (53%), Gaps = 42/139 (30%)
Query: 392 RKCCNHPYVVDEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQ 451
R+CCNHPY++DE LQ LL + FL V IKASGKLQLLDSML EL LR LILFQ
Sbjct: 11 RQCCNHPYIIDESLQPLLLKV----AFLNVGIKASGKLQLLDSMLTELITNKLRALILFQ 66
Query: 452 SIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLET 511
K K FNDKNNERFFFL+ET
Sbjct: 67 --------------------------------------KQTVTKIFNDKNNERFFFLMET 88
Query: 512 CACLPSIKLSSVDTIIIFD 530
C PSIKLSSVDT II+D
Sbjct: 89 SVCHPSIKLSSVDTTIIYD 107
>Medtr4g118845.1 | chromatin remodeling factor, putative | HC |
chr4:49251792-49260219 | 20130731
Length = 1063
Score = 117 bits (292), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 154/295 (52%), Gaps = 30/295 (10%)
Query: 296 NINIPALLDS-QSNNEKYGLNPNSDDSAF--QLKDRLSSDIASRCKSDSCRFV----EYW 348
N +P + S ++ +E + ++ +D QL L + R KSD + + E
Sbjct: 360 NFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETI 419
Query: 349 VPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRL 408
+ V +S +Q + Y A+L K+ E++ + + + +I + +RKCCNHPY
Sbjct: 420 LKVGMSQMQKQYYKALLQKDLEVVNAGGERKR---LLNIAMQLRKCCNHPY--------- 467
Query: 409 LWEGLKPDE-FLGVD--IKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDIL 465
L++G +P + D I ++GK+ L+D +L +LK++D R LI Q + DIL
Sbjct: 468 LFQGAEPGPPYTTGDHIITSAGKMVLMDKLLPKLKERDSRVLIFSQMTR------LLDIL 521
Query: 466 DDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDT 525
+D+L F Y RID + + A+++ FN +E+F FLL T A I L++ D
Sbjct: 522 EDYLM--FRGYQYCRIDGNTGGDDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADV 579
Query: 526 IIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD 580
+I++DSDWNP D+++ + Q K +++FR + +T+EE+ + A + LD
Sbjct: 580 VILYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALD 634
>Medtr4g118845.2 | chromatin remodeling factor, putative | HC |
chr4:49253207-49260120 | 20130731
Length = 876
Score = 115 bits (289), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 154/295 (52%), Gaps = 30/295 (10%)
Query: 296 NINIPALLDS-QSNNEKYGLNPNSDDSAF--QLKDRLSSDIASRCKSDSCRFV----EYW 348
N +P + S ++ +E + ++ +D QL L + R KSD + + E
Sbjct: 173 NFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETI 232
Query: 349 VPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRL 408
+ V +S +Q + Y A+L K+ E++ + + + +I + +RKCCNHPY
Sbjct: 233 LKVGMSQMQKQYYKALLQKDLEVVNAGGERKR---LLNIAMQLRKCCNHPY--------- 280
Query: 409 LWEGLKPDE-FLGVD--IKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDIL 465
L++G +P + D I ++GK+ L+D +L +LK++D R LI Q + DIL
Sbjct: 281 LFQGAEPGPPYTTGDHIITSAGKMVLMDKLLPKLKERDSRVLIFSQMTR------LLDIL 334
Query: 466 DDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDT 525
+D+L F Y RID + + A+++ FN +E+F FLL T A I L++ D
Sbjct: 335 EDYLM--FRGYQYCRIDGNTGGDDRDASIEAFNKPGSEKFVFLLSTRAGGLGINLATADV 392
Query: 526 IIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD 580
+I++DSDWNP D+++ + Q K +++FR + +T+EE+ + A + LD
Sbjct: 393 VILYDSDWNPQADLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALD 447
>Medtr5g090090.2 | chromodomain helicase-DNA-binding protein | HC |
chr5:39219576-39198108 | 20130731
Length = 1563
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 134/246 (54%), Gaps = 13/246 (5%)
Query: 345 VEYWVPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVD-- 402
+E + V++S +Q + Y IL +N + L + + V ++ +I++ ++KCCNHP++ +
Sbjct: 851 IERILRVEMSPLQKQYYKWILERNFQNLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESA 909
Query: 403 EHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIG 462
+H G + + + +SGKL +LD +L+ L + R LI Q + +
Sbjct: 910 DHGYGGDSGGSDNSKLERI-VFSSGKLVILDKLLVRLHETKHRVLIFSQMV------RML 962
Query: 463 DILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSS 522
DIL +L R ++R+D S + AM+ FN ++ F FLL T A I L++
Sbjct: 963 DILAQYLSLR--GFQFQRLDGSTKSELRQQAMEHFNAPGSDDFCFLLSTRAGGLGINLAT 1020
Query: 523 VDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD-I 581
DT+IIFDSDWNP ND++++ + Q ++ ++R ++ +VEE L AK+ LD +
Sbjct: 1021 ADTVIIFDSDWNPQNDLQAMSRAHRIGQQDVVNIYRFVTSKSVEEDILERAKKKMVLDHL 1080
Query: 582 NLQNMN 587
+Q +N
Sbjct: 1081 VIQKLN 1086
>Medtr5g090090.1 | chromodomain helicase-DNA-binding protein | HC |
chr5:39219576-39200089 | 20130731
Length = 1383
Score = 111 bits (278), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 134/246 (54%), Gaps = 13/246 (5%)
Query: 345 VEYWVPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVD-- 402
+E + V++S +Q + Y IL +N + L + + V ++ +I++ ++KCCNHP++ +
Sbjct: 851 IERILRVEMSPLQKQYYKWILERNFQNLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESA 909
Query: 403 EHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIG 462
+H G + + + +SGKL +LD +L+ L + R LI Q + +
Sbjct: 910 DHGYGGDSGGSDNSKLERI-VFSSGKLVILDKLLVRLHETKHRVLIFSQMV------RML 962
Query: 463 DILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSS 522
DIL +L R ++R+D S + AM+ FN ++ F FLL T A I L++
Sbjct: 963 DILAQYLSLR--GFQFQRLDGSTKSELRQQAMEHFNAPGSDDFCFLLSTRAGGLGINLAT 1020
Query: 523 VDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD-I 581
DT+IIFDSDWNP ND++++ + Q ++ ++R ++ +VEE L AK+ LD +
Sbjct: 1021 ADTVIIFDSDWNPQNDLQAMSRAHRIGQQDVVNIYRFVTSKSVEEDILERAKKKMVLDHL 1080
Query: 582 NLQNMN 587
+Q +N
Sbjct: 1081 VIQKLN 1086
>Medtr2g094980.1 | chromatin remodeling complex subunit | LC |
chr2:40555429-40554151 | 20130731
Length = 189
Score = 111 bits (277), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 52/77 (67%), Positives = 61/77 (79%)
Query: 770 DRPHVNVVESEKKGTVHGEQRSSHLLLKPEITKLCEVLLLPDTVKSMVDNFLQYVMNNHH 829
D+ N VESEK G VH E R H+ LKP++TKLCEVLLLPD VK+MVDNFL+YVMNNHH
Sbjct: 18 DKSQGNDVESEKNGRVHNESRGLHVSLKPQMTKLCEVLLLPDNVKTMVDNFLEYVMNNHH 77
Query: 830 ITRESVPLLQAFQLSLV 846
ESV +LQAFQ+SL+
Sbjct: 78 FNMESVSILQAFQISLI 94
>Medtr3g053910.4 | chromodomain helicase DNA-binding protein, putative
| HC | chr3:16761487-16784695 | 20130731
Length = 1710
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 132/246 (53%), Gaps = 13/246 (5%)
Query: 345 VEYWVPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVD-- 402
+E + V +S +Q + Y IL +N L + + V ++ +I++ ++KCCNHP++ +
Sbjct: 805 IERILRVDMSPLQKQYYKWILERNFRDLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESA 863
Query: 403 EHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIG 462
+H E + + + +SGKL +LD +L+ L + R LI Q + +
Sbjct: 864 DHGYGGDSESSDSSKLEKI-VFSSGKLVILDKLLVRLHETKHRILIFSQMV------RML 916
Query: 463 DILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSS 522
DIL ++ R ++R+D S + AM FN ++ F FLL T A I L++
Sbjct: 917 DILAQYMSLR--GFQFQRLDGSTKSELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLAT 974
Query: 523 VDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD-I 581
DT+IIFDSDWNP ND++++ + Q +++ ++R ++ +VEE L AK+ LD +
Sbjct: 975 ADTVIIFDSDWNPQNDLQAMSRAHRIGQREVVNIYRFVTSKSVEEDILERAKKKMVLDHL 1034
Query: 582 NLQNMN 587
+Q +N
Sbjct: 1035 VIQKLN 1040
>Medtr3g053910.2 | chromodomain helicase DNA-binding protein, putative
| HC | chr3:16761484-16784751 | 20130731
Length = 1710
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 132/246 (53%), Gaps = 13/246 (5%)
Query: 345 VEYWVPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVD-- 402
+E + V +S +Q + Y IL +N L + + V ++ +I++ ++KCCNHP++ +
Sbjct: 805 IERILRVDMSPLQKQYYKWILERNFRDLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESA 863
Query: 403 EHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIG 462
+H E + + + +SGKL +LD +L+ L + R LI Q + +
Sbjct: 864 DHGYGGDSESSDSSKLEKI-VFSSGKLVILDKLLVRLHETKHRILIFSQMV------RML 916
Query: 463 DILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSS 522
DIL ++ R ++R+D S + AM FN ++ F FLL T A I L++
Sbjct: 917 DILAQYMSLR--GFQFQRLDGSTKSELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLAT 974
Query: 523 VDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD-I 581
DT+IIFDSDWNP ND++++ + Q +++ ++R ++ +VEE L AK+ LD +
Sbjct: 975 ADTVIIFDSDWNPQNDLQAMSRAHRIGQREVVNIYRFVTSKSVEEDILERAKKKMVLDHL 1034
Query: 582 NLQNMN 587
+Q +N
Sbjct: 1035 VIQKLN 1040
>Medtr3g053910.1 | chromodomain helicase DNA-binding protein, putative
| HC | chr3:16763046-16784207 | 20130731
Length = 1739
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 132/246 (53%), Gaps = 13/246 (5%)
Query: 345 VEYWVPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVD-- 402
+E + V +S +Q + Y IL +N L + + V ++ +I++ ++KCCNHP++ +
Sbjct: 834 IERILRVDMSPLQKQYYKWILERNFRDLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESA 892
Query: 403 EHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIG 462
+H E + + + +SGKL +LD +L+ L + R LI Q + +
Sbjct: 893 DHGYGGDSESSDSSKLEKI-VFSSGKLVILDKLLVRLHETKHRILIFSQMV------RML 945
Query: 463 DILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSS 522
DIL ++ R ++R+D S + AM FN ++ F FLL T A I L++
Sbjct: 946 DILAQYMSLR--GFQFQRLDGSTKSELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLAT 1003
Query: 523 VDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD-I 581
DT+IIFDSDWNP ND++++ + Q +++ ++R ++ +VEE L AK+ LD +
Sbjct: 1004 ADTVIIFDSDWNPQNDLQAMSRAHRIGQREVVNIYRFVTSKSVEEDILERAKKKMVLDHL 1063
Query: 582 NLQNMN 587
+Q +N
Sbjct: 1064 VIQKLN 1069
>Medtr3g053910.3 | chromodomain helicase DNA-binding protein, putative
| HC | chr3:16761484-16784751 | 20130731
Length = 1739
Score = 109 bits (272), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 132/246 (53%), Gaps = 13/246 (5%)
Query: 345 VEYWVPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVD-- 402
+E + V +S +Q + Y IL +N L + + V ++ +I++ ++KCCNHP++ +
Sbjct: 834 IERILRVDMSPLQKQYYKWILERNFRDLNKGVRGNQV-SLLNIVVELKKCCNHPFLFESA 892
Query: 403 EHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIG 462
+H E + + + +SGKL +LD +L+ L + R LI Q + +
Sbjct: 893 DHGYGGDSESSDSSKLEKI-VFSSGKLVILDKLLVRLHETKHRILIFSQMV------RML 945
Query: 463 DILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSS 522
DIL ++ R ++R+D S + AM FN ++ F FLL T A I L++
Sbjct: 946 DILAQYMSLR--GFQFQRLDGSTKSELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLAT 1003
Query: 523 VDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD-I 581
DT+IIFDSDWNP ND++++ + Q +++ ++R ++ +VEE L AK+ LD +
Sbjct: 1004 ADTVIIFDSDWNPQNDLQAMSRAHRIGQREVVNIYRFVTSKSVEEDILERAKKKMVLDHL 1063
Query: 582 NLQNMN 587
+Q +N
Sbjct: 1064 VIQKLN 1069
>Medtr4g058650.1 | hypothetical protein | HC |
chr4:21566239-21578734 | 20130731
Length = 1462
Score = 108 bits (270), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 75/117 (64%), Gaps = 5/117 (4%)
Query: 729 TEGILKKRKKVSSNVVDHPSSKSEDENLSNGIKEGASGDLVDRPHVNVVESEKKGTVHGE 788
T G K+ + + N VD +SKS DE KEG SGD V++P N VE+EK T+
Sbjct: 232 TSGPSKRIRGI--NNVDQHASKSNDEKSCTRSKEGKSGDPVEKPQGNTVENEKIRTL--- 286
Query: 789 QRSSHLLLKPEITKLCEVLLLPDTVKSMVDNFLQYVMNNHHITRESVPLLQAFQLSL 845
QRS H LKPEI KLCE+L LPD VKSM FL+Y MNN+ I E V +LQAFQLSL
Sbjct: 287 QRSLHRSLKPEIAKLCEILHLPDNVKSMAGKFLEYTMNNYKICTEPVSILQAFQLSL 343
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/166 (36%), Positives = 83/166 (50%), Gaps = 27/166 (16%)
Query: 125 KQVTLEAKEVNQ-----SEEHDPETLQVKVKRMDARMYRSLFKKPKEGSS---------V 170
K+V+L+ KEV + SEE K MD R S KE S+ V
Sbjct: 85 KEVSLDCKEVFEDCILPSEEG---------KAMDMRTESSSSGSAKEPSAKEATLGSAVV 135
Query: 171 PSNTPTNETCMVPESVQPNFSGEETLQ-MSMSNSILDGELVRN--GHDGGEMSILSKRKG 227
SN+ T+ET +PE VQ + +ET Q +++ +S + L+R G++ G+ SKRK
Sbjct: 136 QSNSTTHETSDIPERVQSDCHEKETSQTLAIRDSDSNESLIRKCVGNEKGQNLTPSKRKS 195
Query: 228 MTVDMDSDPSASLSKDDNCNFIPNASPSMSDGNVIGTDGPYSKRVR 273
VD SD S + D+NCN I N P NV+ T GP SKR+R
Sbjct: 196 TVVDKHSDVSPRVVDDENCNLIVNPDPEKLCCNVVETSGP-SKRIR 240
>Medtr4g058650.2 | hypothetical protein | HC |
chr4:21567087-21578705 | 20130731
Length = 1355
Score = 108 bits (269), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 63/117 (53%), Positives = 75/117 (64%), Gaps = 5/117 (4%)
Query: 729 TEGILKKRKKVSSNVVDHPSSKSEDENLSNGIKEGASGDLVDRPHVNVVESEKKGTVHGE 788
T G K+ + + N VD +SKS DE KEG SGD V++P N VE+EK T+
Sbjct: 125 TSGPSKRIRGI--NNVDQHASKSNDEKSCTRSKEGKSGDPVEKPQGNTVENEKIRTL--- 179
Query: 789 QRSSHLLLKPEITKLCEVLLLPDTVKSMVDNFLQYVMNNHHITRESVPLLQAFQLSL 845
QRS H LKPEI KLCE+L LPD VKSM FL+Y MNN+ I E V +LQAFQLSL
Sbjct: 180 QRSLHRSLKPEIAKLCEILHLPDNVKSMAGKFLEYTMNNYKICTEPVSILQAFQLSL 236
Score = 59.3 bits (142), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/134 (37%), Positives = 69/134 (51%), Gaps = 13/134 (9%)
Query: 152 MDARMYRSLFKKPKEGSS---------VPSNTPTNETCMVPESVQPNFSGEETLQ-MSMS 201
MD R S KE S+ V SN+ T+ET +PE VQ + +ET Q +++
Sbjct: 1 MDMRTESSSSGSAKEPSAKEATLGSAVVQSNSTTHETSDIPERVQSDCHEKETSQTLAIR 60
Query: 202 NSILDGELVRN--GHDGGEMSILSKRKGMTVDMDSDPSASLSKDDNCNFIPNASPSMSDG 259
+S + L+R G++ G+ SKRK VD SD S + D+NCN I N P
Sbjct: 61 DSDSNESLIRKCVGNEKGQNLTPSKRKSTVVDKHSDVSPRVVDDENCNLIVNPDPEKLCC 120
Query: 260 NVIGTDGPYSKRVR 273
NV+ T GP SKR+R
Sbjct: 121 NVVETSGP-SKRIR 133
>Medtr2g020000.1 | chromatin remodeling factor, putative | HC |
chr2:6619806-6610735 | 20130731
Length = 1066
Score = 102 bits (255), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/295 (30%), Positives = 153/295 (51%), Gaps = 30/295 (10%)
Query: 296 NINIPALLDS-QSNNEKYGLNPNSDDSAF--QLKDRLSSDIASRCKSDSCRFV----EYW 348
N +P + S ++ +E + ++ +D QL L + R KSD + + E
Sbjct: 363 NFLLPEIFSSAETFDEWFQISGENDQQEVVQQLHKVLRPFLLRRLKSDVEKGLPPKKETI 422
Query: 349 VPVQISDVQLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRL 408
+ V +S +Q + Y A+L K+ E++ + + + +I + +RKCCNHPY
Sbjct: 423 LKVGMSQLQKQYYKALLQKDLEVVNAGGERKR---LLNIAMQLRKCCNHPY--------- 470
Query: 409 LWEGLKPDE-FLGVD--IKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDIL 465
L++G +P + D I ++GK+ LLD +L +LK++D R LI Q + DIL
Sbjct: 471 LFQGAEPGPPYTTGDHLITSAGKMVLLDKLLPKLKERDSRVLIFSQMT------RLLDIL 524
Query: 466 DDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDT 525
+D+L F Y RID + + A++ FN +E+F FLL T A I L++ D
Sbjct: 525 EDYLM--FRGYQYCRIDGNTGGDDRDASIDAFNKPGSEKFVFLLSTRAGGLGINLATADV 582
Query: 526 IIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD 580
+I++DSDWNP D+++ + Q K +++FR + +T+EE+ + A + LD
Sbjct: 583 VILYDSDWNPQVDLQAQDRAHRIGQKKEVQVFRFCTEYTIEEKVIERAYKKLALD 637
>Medtr5g005840.1 | chromatin remodeling factor, putative | HC |
chr5:644652-653059 | 20130731
Length = 1063
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 108/198 (54%), Gaps = 17/198 (8%)
Query: 383 AIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKK 442
+++++ + +RKCCNHPY+ + ++ + +E ++ASGK +LLD +L +L++
Sbjct: 637 SLQNLTMQLRKCCNHPYLFVGN-----YDIYRREEI----VRASGKFELLDRLLPKLRRA 687
Query: 443 DLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNN 502
R L+ Q + DIL+ +L+ + R+D S ++ + +KKFN ++
Sbjct: 688 GHRVLLFSQMTR------LMDILEVYLQ--LHDYKFLRLDGSTKTEERGSLLKKFNAPDS 739
Query: 503 ERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSA 562
F FLL T A + L + DT+IIFDSDWNP D ++ + Q K +++F L S
Sbjct: 740 PYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSV 799
Query: 563 FTVEERALSFAKQDKTLD 580
++EE L AKQ +D
Sbjct: 800 GSIEEVILERAKQKMGID 817
>Medtr1g105050.1 | chromatin remodeling factor, putative | HC |
chr1:47349899-47341180 | 20130731
Length = 1083
Score = 99.0 bits (245), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/198 (32%), Positives = 106/198 (53%), Gaps = 16/198 (8%)
Query: 383 AIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKK 442
+++++ + +RKCCNHPY+ ++ K E + ++ASGK +LLD +L +L++
Sbjct: 650 SLQNLTMQLRKCCNHPYLFVGD-----YDMYKCKEEI---VRASGKFELLDRLLPKLRRA 701
Query: 443 DLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNN 502
R L+ Q + D L+ +LR Y R+D S ++ + ++KFN ++
Sbjct: 702 GHRVLLFSQMTR------LMDTLEVYLR--LHDFKYLRLDGSTKTEERGSLLRKFNAPDS 753
Query: 503 ERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSA 562
F FLL T A + L + DT+IIFDSDWNP D ++ + Q K +++F L S
Sbjct: 754 PYFMFLLSTRAGGLGLNLQTADTVIIFDSDWNPQMDQQAEDRAHRIGQKKEVRVFVLVSV 813
Query: 563 FTVEERALSFAKQDKTLD 580
+VEE L AKQ +D
Sbjct: 814 GSVEEVILERAKQKMGID 831
>Medtr7g039320.1 | chromodomain helicase-DNA-binding-like protein |
HC | chr7:14592916-14600556 | 20130731
Length = 891
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 113/228 (49%), Gaps = 30/228 (13%)
Query: 373 RSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPDEFLGVD--IKASGKLQ 430
R + K++ + +R +I +RK C+HPY L+ G++P+ + + ++ASGKL
Sbjct: 271 RIAMKLEFLTTLRARVIQLRKACSHPY---------LFPGIEPEPYEEGEHLVQASGKLL 321
Query: 431 LLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKK 490
+LD +L +L R L+ Q DIL D+L R SYER+D S+ ++
Sbjct: 322 ILDQLLRKLHHNGHRVLLFAQMTHTL------DILQDYLELR--KYSYERLDGSIRAEER 373
Query: 491 LAAMKKFNDKN-----------NERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDI 539
AA++ F++ + N F F++ T A + L + DT+I ++ DWNP D
Sbjct: 374 FAAIRSFSNSSANTGLNFEANQNGAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDR 433
Query: 540 RSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLDINLQNMN 587
++LQ+ Q + L + TVEE + A++ L +N+ N
Sbjct: 434 QALQRAHRIGQMNHVLCINLVTEHTVEEVIMRRAERKLQLSLNVTGDN 481
>Medtr7g039320.2 | chromodomain helicase-DNA-binding-like protein |
HC | chr7:14592916-14600556 | 20130731
Length = 887
Score = 92.8 bits (229), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 113/228 (49%), Gaps = 30/228 (13%)
Query: 373 RSSSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPDEFLGVD--IKASGKLQ 430
R + K++ + +R +I +RK C+HPY L+ G++P+ + + ++ASGKL
Sbjct: 271 RIAMKLEFLTTLRARVIQLRKACSHPY---------LFPGIEPEPYEEGEHLVQASGKLL 321
Query: 431 LLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKK 490
+LD +L +L R L+ Q DIL D+L R SYER+D S+ ++
Sbjct: 322 ILDQLLRKLHHNGHRVLLFAQMTHTL------DILQDYLELR--KYSYERLDGSIRAEER 373
Query: 491 LAAMKKFNDKN-----------NERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDI 539
AA++ F++ + N F F++ T A + L + DT+I ++ DWNP D
Sbjct: 374 FAAIRSFSNSSANTGLNFEANQNGAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDR 433
Query: 540 RSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLDINLQNMN 587
++LQ+ Q + L + TVEE + A++ L +N+ N
Sbjct: 434 QALQRAHRIGQMNHVLCINLVTEHTVEEVIMRRAERKLQLSLNVTGDN 481
>Medtr4g118720.1 | SNF2 family amine-terminal protein | HC |
chr4:49190490-49169826 | 20130731
Length = 3282
Score = 91.7 bits (226), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 112/234 (47%), Gaps = 13/234 (5%)
Query: 345 VEYWVPVQISDV---QLEQYCAILLKNAEILRSSSKVDSVGAIRDILISIRKCCNHPYVV 401
VE +P +I + + Y +L+K E + ++ + ++ +R CNHPY+
Sbjct: 1241 VENQLPSKIERLIRCEASSYQKLLMKRVEDNLGAIGTSKARSVHNSVMELRNICNHPYLS 1300
Query: 402 DEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLI 461
H + + + P +L I+ GKL++LD +L +LK D R L S +
Sbjct: 1301 QLHSEEV--DHYIPKHYLPPIIRLCGKLEMLDRVLPKLKATDHRVLFF------STMTRL 1352
Query: 462 GDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLS 521
D+++++L + Y R+D + A + FN ++ F FLL A + L
Sbjct: 1353 LDVMEEYLTSKQY--RYLRLDGHTSGGDRGALIDLFNKPDSPYFIFLLSIRAGGVGVNLQ 1410
Query: 522 SVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQ 575
+ DT+I+FD+DWNP D+++ + Q K + + R + TVEE+ + A+
Sbjct: 1411 AADTVILFDTDWNPQVDLQAQARAHRIGQKKDVLVLRFETVQTVEEQVRASAEH 1464
>Medtr7g045505.1 | Nodule-specific Glycine Rich Peptide | HC |
chr7:16014208-16021633 | 20130731
Length = 985
Score = 89.7 bits (221), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 30/226 (13%)
Query: 375 SSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPDEFLGVD--IKASGKLQLL 432
SS + ++++ +I +RK C+HPY L+ G++P+ + + ++ASGKL +L
Sbjct: 271 SSGTSNHQSLQNTVIQLRKACSHPY---------LFPGIEPEPYEEGEHLVQASGKLLIL 321
Query: 433 DSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLA 492
D +L +L R L+ Q DIL D+L SYER+D S+ ++ A
Sbjct: 322 DQLLRKLHHNGHRVLLFAQMTHTL------DILQDYLE--LSKYSYERLDGSIRAEERFA 373
Query: 493 AMKKFNDKN-----------NERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRS 541
A++ F++ + N F F++ T A + L + DT+I ++ DWNP D ++
Sbjct: 374 AIRSFSNSSANTGLNFEANQNGAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDRQA 433
Query: 542 LQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLDINLQNMN 587
LQ+ Q + L + TVEE + A++ L +N+ N
Sbjct: 434 LQRAHRIGQMNHVLCINLVTEHTVEEVIMRRAERKLQLSLNVTGDN 479
>Medtr7g045505.2 | Nodule-specific Glycine Rich Peptide | HC |
chr7:16014208-16020315 | 20130731
Length = 827
Score = 89.4 bits (220), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 111/226 (49%), Gaps = 30/226 (13%)
Query: 375 SSKVDSVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPDEFLGVD--IKASGKLQLL 432
SS + ++++ +I +RK C+HPY L+ G++P+ + + ++ASGKL +L
Sbjct: 271 SSGTSNHQSLQNTVIQLRKACSHPY---------LFPGIEPEPYEEGEHLVQASGKLLIL 321
Query: 433 DSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLA 492
D +L +L R L+ Q DIL D+L SYER+D S+ ++ A
Sbjct: 322 DQLLRKLHHNGHRVLLFAQMTHTL------DILQDYLE--LSKYSYERLDGSIRAEERFA 373
Query: 493 AMKKFNDKN-----------NERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRS 541
A++ F++ + N F F++ T A + L + DT+I ++ DWNP D ++
Sbjct: 374 AIRSFSNSSANTGLNFEANQNGAFVFMISTRAGGVGLNLVAADTVIFYEQDWNPQVDRQA 433
Query: 542 LQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLDINLQNMN 587
LQ+ Q + L + TVEE + A++ L +N+ N
Sbjct: 434 LQRAHRIGQMNHVLCINLVTEHTVEEVIMRRAERKLQLSLNVTGDN 479
>Medtr5g020000.1 | chromatin-remodeling complex ATPase chain,
putative | HC | chr5:7592986-7599103 | 20130731
Length = 750
Score = 83.2 bits (204), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 17/193 (8%)
Query: 383 AIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKK 442
++ +++I +RK CNHP +++ +++G + I+ GK QLLD +L L +
Sbjct: 467 SLNNLVIQLRKVCNHPDLLES-----VFDGSYFYPPVNEIIEKCGKFQLLDRLLERLFAR 521
Query: 443 DLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYE--RIDKSLPPSKKLAAMKKFNDK 500
+ + LI Q + DI+D + F +E RID S+ + ++ FND
Sbjct: 522 NHKVLIFSQWTK------VLDIMDYY----FSEKGFEVCRIDGSVKLDDRKRQIQDFNDT 571
Query: 501 NNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLY 560
+ FLL T A I L++ DT I++DSDWNP D++++ + Q K + ++RL
Sbjct: 572 TSNCRIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAMDRCHRIGQTKPVHVYRLA 631
Query: 561 SAFTVEERALSFA 573
+A +VE R L A
Sbjct: 632 TAQSVEGRMLKRA 644
>Medtr1g053955.1 | helicase | HC | chr1:22924323-22942659 | 20130731
Length = 2044
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 82/154 (53%), Gaps = 9/154 (5%)
Query: 427 GKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLP 486
GKLQ L +L +LK + R LI Q + DIL+ F+ +G +Y R+D S
Sbjct: 1062 GKLQELAILLRKLKSEGHRALIFTQMTK------MLDILEAFI-NLYGY-TYMRLDGSTQ 1113
Query: 487 PSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKIT 546
P ++ M++FN N + F F+L T + I L DT+I +DSDWNP D ++ +
Sbjct: 1114 PEERQTLMQRFN-TNPKYFLFILSTRSGGVGINLVGADTVIFYDSDWNPAMDQQAQDRCH 1172
Query: 547 LDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD 580
Q + + ++RL S T+EE L AKQ + LD
Sbjct: 1173 RIGQTREVHIYRLISESTIEENILKKAKQKRALD 1206
>Medtr7g090960.1 | DNA helicase INO80-like protein | HC |
chr7:35860856-35873661 | 20130731
Length = 1514
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 426 SGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSL 485
SGKLQ LD +L L+ + R L+ Q + +IL+D++ R Y R+D S
Sbjct: 1191 SGKLQTLDILLKRLRAGNHRVLLFAQMTK------MLNILEDYMNYR--KYKYCRLDGST 1242
Query: 486 PPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKI 545
+ ++ F ++ + F FLL T A I L++ DT+I ++SDWNP D++++ +
Sbjct: 1243 SIQDRRDMVRDFQHRS-DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRA 1301
Query: 546 TLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTL 579
Q K + ++RL TVEE+ L A Q T+
Sbjct: 1302 HRLGQTKDVTVYRLICKETVEEKILLRASQKSTV 1335
>Medtr7g090960.2 | DNA helicase INO80-like protein | HC |
chr7:35860856-35873661 | 20130731
Length = 1433
Score = 73.6 bits (179), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 81/154 (52%), Gaps = 9/154 (5%)
Query: 426 SGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSL 485
SGKLQ LD +L L+ + R L+ Q + +IL+D++ R Y R+D S
Sbjct: 1110 SGKLQTLDILLKRLRAGNHRVLLFAQMTK------MLNILEDYMNYR--KYKYCRLDGST 1161
Query: 486 PPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKI 545
+ ++ F ++ + F FLL T A I L++ DT+I ++SDWNP D++++ +
Sbjct: 1162 SIQDRRDMVRDFQHRS-DIFVFLLSTRAGGLGINLTAADTVIFYESDWNPTLDLQAMDRA 1220
Query: 546 TLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTL 579
Q K + ++RL TVEE+ L A Q T+
Sbjct: 1221 HRLGQTKDVTVYRLICKETVEEKILLRASQKSTV 1254
>Medtr5g004720.1 | DNA repair and recombination RAD54-like protein |
HC | chr5:103589-93910 | 20130731
Length = 945
Score = 73.6 bits (179), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 26/205 (12%)
Query: 384 IRDILISIRKCCNHPYVVDEHLQ-------------RLLWEGL---KPDEFLGVD---IK 424
I + +++K CNHP ++ + ++ R + + + G D ++
Sbjct: 476 ILAYITALKKLCNHPKLIYDTIRSGSPGTSGFEDCIRFFPPNMLSGRSGSWTGGDGGWVE 535
Query: 425 ASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKS 484
SGK+Q+L +L +L+++ ++L S D+ R+R P + R+D +
Sbjct: 536 LSGKMQVLARLLHQLRQRTNDRIVLV-----SNYTQTLDLFAQLCRERKYP--HLRLDGA 588
Query: 485 LPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQK 544
SK+ + ND + + F FLL + A + L + +++FD DWNP ND ++ +
Sbjct: 589 TSISKRQKLVNCLNDPSKDEFVFLLSSKAGGCGLNLIGANRLVLFDPDWNPANDKQAAAR 648
Query: 545 ITLDSQYKLIKMFRLYSAFTVEERA 569
+ D Q K + ++R SA T+EE+
Sbjct: 649 VWRDGQKKRVYIYRFLSAGTIEEKV 673
>Medtr1g069755.1 | DNA repair and recombination protein RAD26 | HC |
chr1:30420894-30427365 | 20130731
Length = 1215
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 91/178 (51%), Gaps = 17/178 (9%)
Query: 391 IRKCCNHPYVVDEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLILF 450
+RK CNHP +++ PD + + SGK++++ +L K++ R L+
Sbjct: 707 MRKICNHPDLLEREQA-----SSNPDYG---NPERSGKMKVVAQVLNVWKEQGHRVLLFT 758
Query: 451 QSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLE 510
Q+ + DI + +L FG Y R+D P +++A M +FN ++E F F+L
Sbjct: 759 QT------QQMLDIFEKYLTT-FG-HIYRRMDGLTPVKQRMALMDEFN-ASSEIFVFILT 809
Query: 511 TCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEER 568
T L+ D +IIFD DWNP D+++ ++ Q + + ++RL + T+EE+
Sbjct: 810 TKVGGLGTNLTGADRVIIFDPDWNPSTDMQARERAWRIGQKRDVTIYRLITRGTIEEK 867
>Medtr7g078090.1 | ATP-dependent helicase BRM | HC |
chr7:29513485-29525029 | 20130731
Length = 2224
Score = 73.2 bits (178), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 87/171 (50%), Gaps = 17/171 (9%)
Query: 389 ISIRKCCNHPYVVDEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLI 448
+ +RK CNHP L + L D F+ +K GKL +LD +L++L++ R L+
Sbjct: 1292 MELRKTCNHPL-----LNYPFFSDLSKD-FM---VKCCGKLWMLDRILIKLQRTGHRVLL 1342
Query: 449 LFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFL 508
S + DIL+++L+ R Y RID + + +A+ FN N++ F FL
Sbjct: 1343 F------STMTKLLDILEEYLQWRR--LVYRRIDGTTALEDRESAIVDFNSPNSDCFIFL 1394
Query: 509 LETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRL 559
L A + L S DT++I+D D NP N+ +++ + Q + +K+ +
Sbjct: 1395 LSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKREVKVIYM 1445
>Medtr8g030550.1 | ATP-dependent helicase BRM | HC |
chr8:11279486-11267681 | 20130731
Length = 2208
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 87/171 (50%), Gaps = 17/171 (9%)
Query: 389 ISIRKCCNHPYVVDEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLI 448
+ +RK CNHP + L EF+ +K+ GKL +LD +L++L++ R L+
Sbjct: 1284 MELRKTCNHPLLNYPFFSDL------SKEFI---VKSCGKLWILDRILIKLQRTGHRVLL 1334
Query: 449 LFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFL 508
S + DIL+++L+ R Y RID + + +A+ FN +++ F FL
Sbjct: 1335 F------STMTKLLDILEEYLQWRRL--VYRRIDGTTSLEDRESAINDFNGPDSDCFIFL 1386
Query: 509 LETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRL 559
L A + L S DT++I+D D NP N+ +++ + Q + +K+ +
Sbjct: 1387 LSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKRPVKVIYM 1437
>Medtr8g030550.2 | ATP-dependent helicase BRM | HC |
chr8:11279486-11267681 | 20130731
Length = 1745
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 87/171 (50%), Gaps = 17/171 (9%)
Query: 389 ISIRKCCNHPYVVDEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLI 448
+ +RK CNHP + L EF+ +K+ GKL +LD +L++L++ R L+
Sbjct: 1284 MELRKTCNHPLLNYPFFSDL------SKEFI---VKSCGKLWILDRILIKLQRTGHRVLL 1334
Query: 449 LFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFL 508
S + DIL+++L+ R Y RID + + +A+ FN +++ F FL
Sbjct: 1335 F------STMTKLLDILEEYLQWRRL--VYRRIDGTTSLEDRESAINDFNGPDSDCFIFL 1386
Query: 509 LETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRL 559
L A + L S DT++I+D D NP N+ +++ + Q + +K+ +
Sbjct: 1387 LSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKRPVKVIYM 1437
>Medtr8g030550.3 | ATP-dependent helicase BRM | HC |
chr8:11279486-11269047 | 20130731
Length = 2026
Score = 71.6 bits (174), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 87/171 (50%), Gaps = 17/171 (9%)
Query: 389 ISIRKCCNHPYVVDEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMELKKKDLRTLI 448
+ +RK CNHP + L EF+ +K+ GKL +LD +L++L++ R L+
Sbjct: 1284 MELRKTCNHPLLNYPFFSDL------SKEFI---VKSCGKLWILDRILIKLQRTGHRVLL 1334
Query: 449 LFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFL 508
S + DIL+++L+ R Y RID + + +A+ FN +++ F FL
Sbjct: 1335 F------STMTKLLDILEEYLQWRRL--VYRRIDGTTSLEDRESAINDFNGPDSDCFIFL 1386
Query: 509 LETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRL 559
L A + L S DT++I+D D NP N+ +++ + Q + +K+ +
Sbjct: 1387 LSIRAAGRGLNLQSADTVVIYDPDPNPKNEEQAVARAHRIGQKRPVKVIYM 1437
>Medtr4g078495.1 | DNA repair and recombination RAD26-like protein,
putative | HC | chr4:30318621-30324652 | 20130731
Length = 872
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 90/169 (53%), Gaps = 12/169 (7%)
Query: 408 LLWEGLKPDEFLGV-DIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILD 466
L+ ++ + FLG+ D + GK++ L+ +L+ + L+ S+ + DIL+
Sbjct: 501 LVGGSMQNESFLGLSDAEHCGKMRALEKLLLSWFSHGDKVLLFSYSVR------MLDILE 554
Query: 467 DFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTI 526
F+ ++ + R+D S P + + + + FN +++ F L+ T A + L S + +
Sbjct: 555 KFIIRK--GYCFSRLDGSTPTNLRQSLVDDFNSSPSKQVF-LISTRAGGLGLNLVSANRV 611
Query: 527 IIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAKQ 575
+IFD +WNP D+++ + Q + + +FRL SA ++EE L +++Q
Sbjct: 612 VIFDPNWNPSQDLQAQDRSFRYGQKRHVVVFRLLSAGSLEE--LVYSRQ 658
>Medtr4g078460.1 | DNA repair and recombination RAD26-like protein,
putative | HC | chr4:30287232-30295639 | 20130731
Length = 1158
Score = 55.8 bits (133), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 86/165 (52%), Gaps = 10/165 (6%)
Query: 408 LLWEGLKPDEFLGV-DIKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILD 466
L+ ++ + FLG+ D + GK++ L+ +L+ + L+ S+ + DIL+
Sbjct: 787 LVGGSMQNESFLGLSDAEHCGKMRALEKLLLSWFSHGDKVLLFSYSVR------MLDILE 840
Query: 467 DFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTI 526
F+ ++ + R+D S P + + + + FN +++ F L+ T A + L S + +
Sbjct: 841 KFIIRK--GYCFSRLDGSTPTNLRQSLVDDFNSSPSKQVF-LISTRAGGLGLNLVSANRV 897
Query: 527 IIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALS 571
+IFD +WNP D+++ + Q + + +FRL SA ++EE S
Sbjct: 898 VIFDPNWNPSQDLQAQDRSFRYGQKRHVVVFRLLSAGSLEELVYS 942
>Medtr4g035100.3 | TATA-binding protein associated factor-like protein
| HC | chr4:12002197-12022325 | 20130731
Length = 2046
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 463 DILD-DFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLS 521
DI++ D + +Y R+D S+ K+ +K FN L L + L+
Sbjct: 1842 DIIEKDLFQTHMKSVTYLRLDGSVETEKRFEIVKAFNSDPTIDVLLLTTHVGGL-GLNLT 1900
Query: 522 SVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAK 574
S DT++ + DWNP+ D++++ + Q K++ + RL T+EE+ +S +
Sbjct: 1901 SADTLVFVEHDWNPMRDLQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQR 1953
>Medtr4g035100.1 | TATA-binding protein associated factor-like protein
| HC | chr4:12002197-12022121 | 20130731
Length = 2045
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 463 DILD-DFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLS 521
DI++ D + +Y R+D S+ K+ +K FN L L + L+
Sbjct: 1842 DIIEKDLFQTHMKSVTYLRLDGSVETEKRFEIVKAFNSDPTIDVLLLTTHVGGL-GLNLT 1900
Query: 522 SVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAK 574
S DT++ + DWNP+ D++++ + Q K++ + RL T+EE+ +S +
Sbjct: 1901 SADTLVFVEHDWNPMRDLQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQR 1953
>Medtr4g035100.2 | TATA-binding protein associated factor-like protein
| HC | chr4:12002197-12022121 | 20130731
Length = 2045
Score = 54.3 bits (129), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 463 DILD-DFLRQRFGPDSYERIDKSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLS 521
DI++ D + +Y R+D S+ K+ +K FN L L + L+
Sbjct: 1842 DIIEKDLFQTHMKSVTYLRLDGSVETEKRFEIVKAFNSDPTIDVLLLTTHVGGL-GLNLT 1900
Query: 522 SVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRLYSAFTVEERALSFAK 574
S DT++ + DWNP+ D++++ + Q K++ + RL T+EE+ +S +
Sbjct: 1901 SADTLVFVEHDWNPMRDLQAMDRAHRLGQKKVVNVHRLIMRGTLEEKVMSLQR 1953
>Medtr1g035330.1 | ATP-dependent helicase family protein | HC |
chr1:12827792-12817494 | 20130731
Length = 745
Score = 50.8 bits (120), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 74/158 (46%), Gaps = 9/158 (5%)
Query: 423 IKASGKLQLLDSMLMELKKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERID 482
+ S K + L +L LKK R LI Q S D++ LD +Y+R+D
Sbjct: 566 VMLSAKCRALAELLPSLKKSGHRVLIFSQ--WTSMLDILEWALDVI------GLTYKRLD 617
Query: 483 KSLPPSKKLAAMKKFNDKNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSL 542
S +++ + FN+ + F LL T A + L+ DT++I D D+NP D ++
Sbjct: 618 GSTQVAERQTIVDTFNN-DTSIFACLLSTRAGGQGLNLTGADTVVIHDMDFNPQIDRQAE 676
Query: 543 QKITLDSQYKLIKMFRLYSAFTVEERALSFAKQDKTLD 580
+ Q K + ++RL + TV+E AK+ LD
Sbjct: 677 DRCHRIGQTKPVTVYRLVTKGTVDENVYEIAKRKLGLD 714
>Medtr3g071860.1 | chromatin remodeling complex subunit | HC |
chr3:32254412-32248878 | 20130731
Length = 1267
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 89/188 (47%), Gaps = 12/188 (6%)
Query: 380 SVGAIRDILISIRKCCNHPYVVDEHLQRLLWEGLKPDEFLGVDIKASGKLQLLDSMLMEL 439
++G+I LI C + +E L++L E D++ S K++ + S++ +
Sbjct: 1030 TLGSIHPWLIKTAASCATKFFAEEELKKL--------EISKFDLRKSSKVRFVLSLISRV 1081
Query: 440 KKKDLRTLILFQSIGGSGRDLIGDILDDFLRQRFGPDSYERIDKSLPPSKKLAAMKKFND 499
K + + LI ++ R LI ++ + + + + G + + L ++ + KF D
Sbjct: 1082 VKNE-KVLIFCHNLAPV-RFLI-ELFEKYFQWQNGKEIM-VLTGELDLFERGKVIDKFED 1137
Query: 500 KNNERFFFLLETCACLPSIKLSSVDTIIIFDSDWNPVNDIRSLQKITLDSQYKLIKMFRL 559
+++ L AC I L++ +I DS+WNP +++ + Q K++ +++L
Sbjct: 1138 QSSGSKILLASINACAEGISLTAASRVIFLDSEWNPSKTKQAIARAFRPGQQKMVYVYQL 1197
Query: 560 YSAFTVEE 567
+ ++EE
Sbjct: 1198 LTTGSMEE 1205