Miyakogusa Predicted Gene

Lj0g3v0269099.1

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0269099.1 Non Characterized Hit- tr|A5BUF2|A5BUF2_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,75.95,1e-18,seg,NULL; coiled-coil,NULL; Use1,Vesicle transport
protein, Use1; SUBFAMILY NOT NAMED,NULL; FAMILY N,gene.g20879.t1.1
         (79 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr8g027710.2 | membrane fusion protein Use1 | HC | chr8:10013...   117   3e-27
Medtr8g027710.3 | membrane fusion protein Use1 | HC | chr8:10013...   117   3e-27
Medtr8g027710.1 | membrane fusion protein Use1 | HC | chr8:10013...   117   3e-27
Medtr4g126960.2 | membrane fusion protein Use1 | HC | chr4:52651...   111   2e-25
Medtr4g126960.5 | membrane fusion protein Use1 | HC | chr4:52651...   111   2e-25
Medtr4g126960.1 | membrane fusion protein Use1 | HC | chr4:52651...   111   2e-25
Medtr4g126960.3 | membrane fusion protein Use1 | HC | chr4:52651...   111   2e-25
Medtr4g126960.4 | membrane fusion protein Use1 | HC | chr4:52651...    85   2e-17

>Medtr8g027710.2 | membrane fusion protein Use1 | HC |
          chr8:10013931-10008042 | 20130731
          Length = 237

 Score =  117 bits (293), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/73 (80%), Positives = 61/73 (83%)

Query: 1  MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
          MGISKTEVNLKRLL          KLVHYVATLREQLEQLAEEKTPEGLPRISKA+LNDY
Sbjct: 1  MGISKTEVNLKRLLAAAPHQQNQAKLVHYVATLREQLEQLAEEKTPEGLPRISKAMLNDY 60

Query: 61 SEKIEAIACKLVN 73
          SEKIE IA KLV+
Sbjct: 61 SEKIEGIASKLVH 73


>Medtr8g027710.3 | membrane fusion protein Use1 | HC |
          chr8:10013954-10008194 | 20130731
          Length = 237

 Score =  117 bits (293), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/73 (80%), Positives = 61/73 (83%)

Query: 1  MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
          MGISKTEVNLKRLL          KLVHYVATLREQLEQLAEEKTPEGLPRISKA+LNDY
Sbjct: 1  MGISKTEVNLKRLLAAAPHQQNQAKLVHYVATLREQLEQLAEEKTPEGLPRISKAMLNDY 60

Query: 61 SEKIEAIACKLVN 73
          SEKIE IA KLV+
Sbjct: 61 SEKIEGIASKLVH 73


>Medtr8g027710.1 | membrane fusion protein Use1 | HC |
          chr8:10013262-10008357 | 20130731
          Length = 245

 Score =  117 bits (292), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 59/73 (80%), Positives = 61/73 (83%)

Query: 1  MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
          MGISKTEVNLKRLL          KLVHYVATLREQLEQLAEEKTPEGLPRISKA+LNDY
Sbjct: 9  MGISKTEVNLKRLLAAAPHQQNQAKLVHYVATLREQLEQLAEEKTPEGLPRISKAMLNDY 68

Query: 61 SEKIEAIACKLVN 73
          SEKIE IA KLV+
Sbjct: 69 SEKIEGIASKLVH 81


>Medtr4g126960.2 | membrane fusion protein Use1 | HC |
          chr4:52651088-52657503 | 20130731
          Length = 237

 Score =  111 bits (277), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/73 (79%), Positives = 59/73 (80%)

Query: 1  MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
          M ISKTEVNLKRLL          KLVHYVATLREQLEQLAEEKTPEGLPRISKA LNDY
Sbjct: 1  MVISKTEVNLKRLLAAAPQQQNQAKLVHYVATLREQLEQLAEEKTPEGLPRISKATLNDY 60

Query: 61 SEKIEAIACKLVN 73
          SEK EAIA KLV+
Sbjct: 61 SEKTEAIASKLVH 73


>Medtr4g126960.5 | membrane fusion protein Use1 | HC |
          chr4:52651088-52657503 | 20130731
          Length = 237

 Score =  111 bits (277), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/73 (79%), Positives = 59/73 (80%)

Query: 1  MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
          M ISKTEVNLKRLL          KLVHYVATLREQLEQLAEEKTPEGLPRISKA LNDY
Sbjct: 1  MVISKTEVNLKRLLAAAPQQQNQAKLVHYVATLREQLEQLAEEKTPEGLPRISKATLNDY 60

Query: 61 SEKIEAIACKLVN 73
          SEK EAIA KLV+
Sbjct: 61 SEKTEAIASKLVH 73


>Medtr4g126960.1 | membrane fusion protein Use1 | HC |
          chr4:52651088-52657503 | 20130731
          Length = 237

 Score =  111 bits (277), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/73 (79%), Positives = 59/73 (80%)

Query: 1  MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
          M ISKTEVNLKRLL          KLVHYVATLREQLEQLAEEKTPEGLPRISKA LNDY
Sbjct: 1  MVISKTEVNLKRLLAAAPQQQNQAKLVHYVATLREQLEQLAEEKTPEGLPRISKATLNDY 60

Query: 61 SEKIEAIACKLVN 73
          SEK EAIA KLV+
Sbjct: 61 SEKTEAIASKLVH 73


>Medtr4g126960.3 | membrane fusion protein Use1 | HC |
          chr4:52651311-52657503 | 20130731
          Length = 237

 Score =  111 bits (277), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 58/73 (79%), Positives = 59/73 (80%)

Query: 1  MGISKTEVNLKRLLXXXXXXXXXXKLVHYVATLREQLEQLAEEKTPEGLPRISKAILNDY 60
          M ISKTEVNLKRLL          KLVHYVATLREQLEQLAEEKTPEGLPRISKA LNDY
Sbjct: 1  MVISKTEVNLKRLLAAAPQQQNQAKLVHYVATLREQLEQLAEEKTPEGLPRISKATLNDY 60

Query: 61 SEKIEAIACKLVN 73
          SEK EAIA KLV+
Sbjct: 61 SEKTEAIASKLVH 73


>Medtr4g126960.4 | membrane fusion protein Use1 | HC |
          chr4:52651633-52657503 | 20130731
          Length = 213

 Score = 84.7 bits (208), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 41/47 (87%), Positives = 43/47 (91%)

Query: 27 VHYVATLREQLEQLAEEKTPEGLPRISKAILNDYSEKIEAIACKLVN 73
          + YVATLREQLEQLAEEKTPEGLPRISKA LNDYSEK EAIA KLV+
Sbjct: 3  LQYVATLREQLEQLAEEKTPEGLPRISKATLNDYSEKTEAIASKLVH 49