Miyakogusa Predicted Gene

Lj0g3v0269079.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0269079.1 tr|C7DPL3|C7DPL3_WHEAT Cupin (Fragment)
OS=Triticum aestivum PE=4 SV=1,45.28,0.00000000000001, ,CUFF.17778.1
         (274 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g126780.1 | cupin superfamily protein | HC | chr4:52646550...   397   e-111

>Medtr4g126780.1 | cupin superfamily protein | HC |
           chr4:52646550-52640110 | 20130731
          Length = 784

 Score =  397 bits (1020), Expect = e-111,   Method: Compositional matrix adjust.
 Identities = 199/275 (72%), Positives = 226/275 (82%), Gaps = 6/275 (2%)

Query: 3   VKSVCLWSEGDESFHSFKIGIREDELSVVILSATVVLINACEVEQLKIVPRSLSEPVLCL 62
           V+SVCL SEG++SFH+ KIGIREDELSV +LSA +VLIN C VEQL  +P S+SE  L L
Sbjct: 182 VESVCLLSEGNQSFHALKIGIREDELSVALLSAIIVLINVCNVEQLHNIPESVSEAFLSL 241

Query: 63  FKEIRARVSDRVVDGDAEKSGEEGRLYKSNIGVSNLAESIFRLSIDASQLTVSLPFEVVQ 122
            KEIRA  +  +V     KS  EGR  KSN+GV +LA+SIFRLSI+ASQL+VSLPFEVVQ
Sbjct: 242 LKEIRANATHHLVIRGDVKSNVEGRFCKSNVGVCDLADSIFRLSINASQLSVSLPFEVVQ 301

Query: 123 RGLFG---SDFEDFMSNYWEVSPFLLSRELKDLNMDDMFSPFIQSLGWNGSVPSLLSSIL 179
           RGLFG   S FEDF+SN+WEVSPFLLSR  +D N++DMFSPFIQSL WNGSVPSLL SIL
Sbjct: 302 RGLFGTSGSSFEDFLSNHWEVSPFLLSRTSEDHNVNDMFSPFIQSLNWNGSVPSLLHSIL 361

Query: 180 KGLVSCFPIASDEQNILNFLNEVKDRLGCPLIYQQDIRVVKTESQTGKEMHYFQDFHPGC 239
           + LVSCFPIAS+EQNILNFL EVKDRLGCP+IYQQDIRVVK +SQ+ KE HY   FHP C
Sbjct: 362 QDLVSCFPIASEEQNILNFLIEVKDRLGCPIIYQQDIRVVKADSQSRKETHY---FHPEC 418

Query: 240 TKEPLYLTVDDVLKCGQAYEEGYTVALRGLEFRYQ 274
            KEPLY T +DVLKC QAY+EGYTVALRGLEFRYQ
Sbjct: 419 HKEPLYFTNEDVLKCEQAYKEGYTVALRGLEFRYQ 453