Miyakogusa Predicted Gene

Lj0g3v0268669.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0268669.1 Non Characterized Hit- tr|F6HCI9|F6HCI9_VITVI
Putative uncharacterized protein OS=Vitis vinifera
GN=,49.49,0.000000000000001,seg,NULL,CUFF.17751.1
         (143 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr2g461180.1 | octicosapeptide/phox/Bem1p domain kinase super...   125   1e-29
Medtr4g116520.1 | octicosapeptide/phox/Bem1p domain kinase super...    95   2e-20

>Medtr2g461180.1 | octicosapeptide/phox/Bem1p domain kinase
            superfamily protein | HC | chr2:25237288-25245872 |
            20130731
          Length = 1417

 Score =  125 bits (315), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 74/154 (48%), Positives = 91/154 (59%), Gaps = 16/154 (10%)

Query: 1    MTGVLPCSSEEISFGHNSRPGEYNEVARPPVVG-----------NTVKDDTXXXXXXXXV 49
            M   LP  + EIS+G+ SRP EYNEVA  PV G           N  KDD         V
Sbjct: 898  MVDTLPNPTVEISYGNKSRPVEYNEVAHSPVWGSPGTNPQSKNGNHQKDDAVLSSISQPV 957

Query: 50   RFGDVQNSPNSLFSNQDPWAIQHGTFFPPARPNNTTLMKETYSPRDHFGENPGSFGKQIS 109
             FG VQ+S NSLFSNQDPW I HGT++PP RP+  T  KETYS  D  GEN G+  +Q  
Sbjct: 958  GFGHVQDSSNSLFSNQDPWNI-HGTYYPPPRPDKVTSKKETYSYMDQLGENSGNGVEQKF 1016

Query: 110  EAQLDEGLYQSFIQNLTFEHGQSAKGSTEEEEQL 143
            + QL++GLYQ+F QN T E  +     T+E++QL
Sbjct: 1017 DGQLNDGLYQTFKQNSTLEEAR----YTKEDQQL 1046


>Medtr4g116520.1 | octicosapeptide/phox/Bem1p domain kinase
            superfamily protein | HC | chr4:48267560-48275263 |
            20130731
          Length = 1380

 Score = 95.1 bits (235), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 76/148 (51%), Gaps = 36/148 (24%)

Query: 1    MTGVLPCSSEEISFGHNSRPGEYNEVARPPV-------VGNTVKDDTXXXXXXXXVRFGD 53
            M GV PCSS+EIS  H+SR GEY +VA+PPV       + N  KDD+          FGD
Sbjct: 891  MIGVQPCSSKEISSRHSSRTGEYIDVAQPPVLDITQSKIVNHHKDDSTSSTSSPSYMFGD 950

Query: 54   VQNSPNSLFSNQDPWAIQHGTFFPPARPNNTTLMKETYSPRDHFGENPGSFGKQISEAQL 113
            +Q+SPNS+F  QD W IQ GT+                              K   +AQL
Sbjct: 951  MQDSPNSVFGYQDLWNIQQGTY-----------------------------KKSNLDAQL 981

Query: 114  DEGLYQSFIQNLTFEHGQSAKGSTEEEE 141
            D  LY+SF QNL FE+G   KGS E+++
Sbjct: 982  DGNLYESFKQNLNFENGWCDKGSNEDQQ 1009