Miyakogusa Predicted Gene
- Lj0g3v0268509.1
BLASTP 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Lj0g3v0268509.1 tr|D8LCX0|D8LCX0_ECTSI Nucleotidyltransferase
OS=Ectocarpus siliculosus GN=Esi_0111_0086 PE=4
SV=1,40,3e-19,SUBFAMILY NOT NAMED,NULL; FAMILY NOT
NAMED,NULL,gene.g20820.t1.1
(193 letters)
Database: Medicago_aa4.0v1
62,319 sequences; 21,947,249 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Medtr1g109590.2 | nucleotidyltransferase | HC | chr1:49560173-49... 312 2e-85
Medtr1g109590.1 | nucleotidyltransferase | HC | chr1:49560173-49... 311 2e-85
Medtr1g109590.3 | nucleotidyltransferase | HC | chr1:49560173-49... 311 2e-85
>Medtr1g109590.2 | nucleotidyltransferase | HC |
chr1:49560173-49566423 | 20130731
Length = 312
Score = 312 bits (799), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 146/177 (82%), Positives = 159/177 (89%)
Query: 6 TEALGWLLSIPGASNTVLETLVPYSRMSMIQLFGKIPSQFCSQQTAEDMALMAYNRALKL 65
++ LG LLS+PGASNTVLE +VPYSRMS+IQL KIP FCSQQTA+DMAL+AYNRALKL
Sbjct: 29 SQILGLLLSVPGASNTVLEAVVPYSRMSLIQLLAKIPLHFCSQQTADDMALLAYNRALKL 88
Query: 66 SKPGSPVVGVGFTGSLASSRPKQGEHRFYMSTRTADRLWISKVTLAKGLRSREEEDKISS 125
S PGSPV+GVGFTGSLAS RPK GEHRFYMSTRTADRLWISKVTL KGLR+REEED++SS
Sbjct: 89 SSPGSPVIGVGFTGSLASGRPKHGEHRFYMSTRTADRLWISKVTLTKGLRTREEEDRVSS 148
Query: 126 HLLLKAIANACKVPATSSPGLSESDVSDESEKQFNEDQELEQLINGQICYKIYPFGS 182
HLLLKAIANACKVP+ P LSESDVSDE KQFNEDQELEQLINGQIC+KIYPF S
Sbjct: 149 HLLLKAIANACKVPSNDIPELSESDVSDECVKQFNEDQELEQLINGQICFKIYPFRS 205
>Medtr1g109590.1 | nucleotidyltransferase | HC |
chr1:49560173-49567379 | 20130731
Length = 382
Score = 311 bits (797), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 146/177 (82%), Positives = 159/177 (89%)
Query: 6 TEALGWLLSIPGASNTVLETLVPYSRMSMIQLFGKIPSQFCSQQTAEDMALMAYNRALKL 65
++ LG LLS+PGASNTVLE +VPYSRMS+IQL KIP FCSQQTA+DMAL+AYNRALKL
Sbjct: 29 SQILGLLLSVPGASNTVLEAVVPYSRMSLIQLLAKIPLHFCSQQTADDMALLAYNRALKL 88
Query: 66 SKPGSPVVGVGFTGSLASSRPKQGEHRFYMSTRTADRLWISKVTLAKGLRSREEEDKISS 125
S PGSPV+GVGFTGSLAS RPK GEHRFYMSTRTADRLWISKVTL KGLR+REEED++SS
Sbjct: 89 SSPGSPVIGVGFTGSLASGRPKHGEHRFYMSTRTADRLWISKVTLTKGLRTREEEDRVSS 148
Query: 126 HLLLKAIANACKVPATSSPGLSESDVSDESEKQFNEDQELEQLINGQICYKIYPFGS 182
HLLLKAIANACKVP+ P LSESDVSDE KQFNEDQELEQLINGQIC+KIYPF S
Sbjct: 149 HLLLKAIANACKVPSNDIPELSESDVSDECVKQFNEDQELEQLINGQICFKIYPFRS 205
>Medtr1g109590.3 | nucleotidyltransferase | HC |
chr1:49560173-49567379 | 20130731
Length = 382
Score = 311 bits (797), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 146/177 (82%), Positives = 159/177 (89%)
Query: 6 TEALGWLLSIPGASNTVLETLVPYSRMSMIQLFGKIPSQFCSQQTAEDMALMAYNRALKL 65
++ LG LLS+PGASNTVLE +VPYSRMS+IQL KIP FCSQQTA+DMAL+AYNRALKL
Sbjct: 29 SQILGLLLSVPGASNTVLEAVVPYSRMSLIQLLAKIPLHFCSQQTADDMALLAYNRALKL 88
Query: 66 SKPGSPVVGVGFTGSLASSRPKQGEHRFYMSTRTADRLWISKVTLAKGLRSREEEDKISS 125
S PGSPV+GVGFTGSLAS RPK GEHRFYMSTRTADRLWISKVTL KGLR+REEED++SS
Sbjct: 89 SSPGSPVIGVGFTGSLASGRPKHGEHRFYMSTRTADRLWISKVTLTKGLRTREEEDRVSS 148
Query: 126 HLLLKAIANACKVPATSSPGLSESDVSDESEKQFNEDQELEQLINGQICYKIYPFGS 182
HLLLKAIANACKVP+ P LSESDVSDE KQFNEDQELEQLINGQIC+KIYPF S
Sbjct: 149 HLLLKAIANACKVPSNDIPELSESDVSDECVKQFNEDQELEQLINGQICFKIYPFRS 205