Miyakogusa Predicted Gene

Lj0g3v0267429.3
Show Alignment:  
BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0267429.3 Non Characterized Hit- tr|I1N141|I1N141_SOYBN
Uncharacterized protein OS=Glycine max PE=4
SV=1,76.47,0.0000005,RNGMNOXGNASE,Aromatic-ring hydroxylase-like;
SQUALENE MONOOXYGENASE,NULL; no description,NULL; FAD/N,CUFF.17655.3
         (462 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g103510.1 | squalene epoxidase | HC | chr3:47787960-477933...   566   e-161
Medtr1g017270.1 | squalene monooxygenase | HC | chr1:4770122-476...   548   e-156
Medtr1g017270.2 | squalene monooxygenase | HC | chr1:4770017-476...   547   e-156
Medtr6g035065.1 | squalene epoxidase | HC | chr6:12399939-124116...   528   e-150
Medtr6g034955.1 | squalene monooxygenase | HC | chr6:12253385-12...   526   e-149
Medtr4g092640.1 | squalene monooxygenase | HC | chr4:36749132-36...   521   e-148
Medtr3g103510.2 | squalene epoxidase | HC | chr3:47787960-477933...   372   e-103

>Medtr3g103510.1 | squalene epoxidase | HC | chr3:47787960-47793388
           | 20130731
          Length = 519

 Score =  566 bits (1460), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 271/341 (79%), Positives = 305/341 (89%), Gaps = 1/341 (0%)

Query: 88  GAYDVIIVGAGVTGSALAHTLAKDGRRVHVIERDLREPDRIVGELLQPGGYLKLIELGLQ 147
           G  D+IIVGAGV GSALA+TL KDGRRV +IERDL EPDRIVGELLQPGGYLKLIELGL 
Sbjct: 53  GDVDIIIVGAGVAGSALAYTLGKDGRRVLIIERDLNEPDRIVGELLQPGGYLKLIELGLD 112

Query: 148 DCVEQIDAQRVLGYVLFKDGESTNLPYPLQKFHADVTGKSFHNGRFIQRLREKAAALPNV 207
           DCVE+IDAQ+V GY LFKDG+ T L YPL+KFH+D+ G+SFHNGRFI R+REKAA+LPNV
Sbjct: 113 DCVEKIDAQKVFGYALFKDGKHTRLSYPLEKFHSDIAGRSFHNGRFILRMREKAASLPNV 172

Query: 208 QMEQGIATSLLEDDNKTIIGVHYKTKDRQEFKAYAPLTIVCDGCFSNLRHSLCHPKVEVP 267
           ++EQG  TSLLE+ N TI GV YKTKD QEF A APLTIVCDGCFSNLR SLC+PKVEVP
Sbjct: 173 RLEQGTVTSLLEE-NGTIKGVQYKTKDAQEFSACAPLTIVCDGCFSNLRRSLCNPKVEVP 231

Query: 268 SCFVGLILENCQLPFQNYGHVILADPSPILFYPISSTEIRCLVDIPGHKVHPISNGEMAD 327
           SCFVGL+LENC+LP  ++GHVIL DPSP+LFYPISSTEIRCLVD+PG KV  ISNGEMA 
Sbjct: 232 SCFVGLVLENCELPCADHGHVILGDPSPVLFYPISSTEIRCLVDVPGQKVPSISNGEMAK 291

Query: 328 YLKTMVTPQIPPELHDAFVSAINRGNIRTMPNGSMPADPRPTPGALLMGDAFNMRHPLTG 387
           YLKT+V PQ+PPELH AF++A+++G+IRTMPN SMPADP PTPGALLMGDAFNMRHPLTG
Sbjct: 292 YLKTVVAPQVPPELHAAFIAAVDKGHIRTMPNRSMPADPYPTPGALLMGDAFNMRHPLTG 351

Query: 388 GGMTVALSDIVVLQDLLKPLCDLNDAASLCRYLESFYTLRK 428
           GGMTVALSDIVVL++LLKPL DLNDA+SLC+YLESFYTLRK
Sbjct: 352 GGMTVALSDIVVLRNLLKPLRDLNDASSLCKYLESFYTLRK 392



 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query: 430 ALGIIFPIIKAEGVRQTFFPGTLPAFYRTPP 460
           A GII PIIKAEG+RQ FFP T+PA+YR PP
Sbjct: 487 ASGIILPIIKAEGIRQMFFPATVPAYYRAPP 517


>Medtr1g017270.1 | squalene monooxygenase | HC |
           chr1:4770122-4765355 | 20130731
          Length = 526

 Score =  548 bits (1411), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 258/325 (79%), Positives = 288/325 (88%), Gaps = 1/325 (0%)

Query: 104 LAHTLAKDGRRVHVIERDLREPDRIVGELLQPGGYLKLIELGLQDCVEQIDAQRVLGYVL 163
           LAHTL KDGRRVH+IERDL EPDRIVGELLQPGGYLKL+ELGLQDCV+ IDAQRV GY L
Sbjct: 74  LAHTLGKDGRRVHIIERDLSEPDRIVGELLQPGGYLKLVELGLQDCVDNIDAQRVFGYAL 133

Query: 164 FKDGESTNLPYPLQKFHADVTGKSFHNGRFIQRLREKAAALPNVQMEQGIATSLLEDDNK 223
           FKDG+ T L YPL+KFH+DV+G+SFHNGRFIQR+REKAA+LPNV MEQG   SLLE+   
Sbjct: 134 FKDGKHTRLSYPLEKFHSDVSGRSFHNGRFIQRMREKAASLPNVNMEQGTVISLLEEKG- 192

Query: 224 TIIGVHYKTKDRQEFKAYAPLTIVCDGCFSNLRHSLCHPKVEVPSCFVGLILENCQLPFQ 283
           TI GV YK KD Q   AYAPLTIVCDGCFSNLR SLC+PKV+ PSCFVGLILENC+LP  
Sbjct: 193 TIKGVQYKNKDGQALTAYAPLTIVCDGCFSNLRRSLCNPKVDNPSCFVGLILENCELPCA 252

Query: 284 NYGHVILADPSPILFYPISSTEIRCLVDIPGHKVHPISNGEMADYLKTMVTPQIPPELHD 343
           N+GHVIL DPSPILFYPISSTEIRCLVD+PG KV  ISNG+M  YLKT V PQ+PPEL+D
Sbjct: 253 NHGHVILGDPSPILFYPISSTEIRCLVDVPGTKVPSISNGDMTKYLKTTVAPQVPPELYD 312

Query: 344 AFVSAINRGNIRTMPNGSMPADPRPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLQDL 403
           AF++A+++GNIRTMPN SMPADPRPTPGA+LMGDAFNMRHPLTGGGMTVALSDIVVL++L
Sbjct: 313 AFIAAVDKGNIRTMPNRSMPADPRPTPGAVLMGDAFNMRHPLTGGGMTVALSDIVVLRNL 372

Query: 404 LKPLCDLNDAASLCRYLESFYTLRK 428
           LKP+ DLNDA +LC+YLESFYTLRK
Sbjct: 373 LKPMRDLNDAPTLCKYLESFYTLRK 397



 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query: 430 ALGIIFPIIKAEGVRQTFFPGTLPAFYRTPP 460
           A GII PIIKAEG+RQ FFP T+PA+YR PP
Sbjct: 492 ASGIILPIIKAEGIRQMFFPATVPAYYRAPP 522


>Medtr1g017270.2 | squalene monooxygenase | HC |
           chr1:4770017-4765479 | 20130731
          Length = 513

 Score =  547 bits (1410), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 258/325 (79%), Positives = 288/325 (88%), Gaps = 1/325 (0%)

Query: 104 LAHTLAKDGRRVHVIERDLREPDRIVGELLQPGGYLKLIELGLQDCVEQIDAQRVLGYVL 163
           LAHTL KDGRRVH+IERDL EPDRIVGELLQPGGYLKL+ELGLQDCV+ IDAQRV GY L
Sbjct: 74  LAHTLGKDGRRVHIIERDLSEPDRIVGELLQPGGYLKLVELGLQDCVDNIDAQRVFGYAL 133

Query: 164 FKDGESTNLPYPLQKFHADVTGKSFHNGRFIQRLREKAAALPNVQMEQGIATSLLEDDNK 223
           FKDG+ T L YPL+KFH+DV+G+SFHNGRFIQR+REKAA+LPNV MEQG   SLLE+   
Sbjct: 134 FKDGKHTRLSYPLEKFHSDVSGRSFHNGRFIQRMREKAASLPNVNMEQGTVISLLEEKG- 192

Query: 224 TIIGVHYKTKDRQEFKAYAPLTIVCDGCFSNLRHSLCHPKVEVPSCFVGLILENCQLPFQ 283
           TI GV YK KD Q   AYAPLTIVCDGCFSNLR SLC+PKV+ PSCFVGLILENC+LP  
Sbjct: 193 TIKGVQYKNKDGQALTAYAPLTIVCDGCFSNLRRSLCNPKVDNPSCFVGLILENCELPCA 252

Query: 284 NYGHVILADPSPILFYPISSTEIRCLVDIPGHKVHPISNGEMADYLKTMVTPQIPPELHD 343
           N+GHVIL DPSPILFYPISSTEIRCLVD+PG KV  ISNG+M  YLKT V PQ+PPEL+D
Sbjct: 253 NHGHVILGDPSPILFYPISSTEIRCLVDVPGTKVPSISNGDMTKYLKTTVAPQVPPELYD 312

Query: 344 AFVSAINRGNIRTMPNGSMPADPRPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLQDL 403
           AF++A+++GNIRTMPN SMPADPRPTPGA+LMGDAFNMRHPLTGGGMTVALSDIVVL++L
Sbjct: 313 AFIAAVDKGNIRTMPNRSMPADPRPTPGAVLMGDAFNMRHPLTGGGMTVALSDIVVLRNL 372

Query: 404 LKPLCDLNDAASLCRYLESFYTLRK 428
           LKP+ DLNDA +LC+YLESFYTLRK
Sbjct: 373 LKPMRDLNDAPTLCKYLESFYTLRK 397


>Medtr6g035065.1 | squalene epoxidase | HC | chr6:12399939-12411656
           | 20130731
          Length = 528

 Score =  528 bits (1359), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 246/344 (71%), Positives = 295/344 (85%), Gaps = 2/344 (0%)

Query: 86  SGGAYDVIIVGAGVTGSALAHTLAKDGRRVHVIERDLREPDRIVGELLQPGGYLKLIELG 145
           + G  D+IIVGAGV GSALA+TL KDGRRVHVIERDL EPDRIVGELLQPGGYLKL+ELG
Sbjct: 58  AAGGTDIIIVGAGVAGSALAYTLGKDGRRVHVIERDLSEPDRIVGELLQPGGYLKLLELG 117

Query: 146 LQDCVEQIDAQRVLGYVLFKDGESTNLPYPLQKFHADVTGKSFHNGRFIQRLREKAAALP 205
           L+DCV+ IDAQRV GY L+KDG++  L YPL+ F+ DV+G+SFHNGRFI+++REKA+ LP
Sbjct: 118 LEDCVDGIDAQRVFGYALYKDGKNIKLSYPLENFNVDVSGRSFHNGRFIKKMREKASYLP 177

Query: 206 NVQMEQGIATSLLEDDNKTIIGVHYKTKDRQEFKAYAPLTIVCDGCFSNLRHSLCHPKVE 265
           NV++EQG  TSL+E  N +I+GV+YK K  QEF   APLTIVCDGCFSNLR SLC PKVE
Sbjct: 178 NVKLEQGTVTSLVE-KNGSIVGVNYKNKSGQEFTEKAPLTIVCDGCFSNLRSSLCKPKVE 236

Query: 266 VPSCFVGLILENCQLPFQNYGHVILADPSPILFYPISSTEIRCLVDIP-GHKVHPISNGE 324
           VPS FVGL+LENC LP+ N+GHVIL DPSPILFYPISSTEIRC VD+P G K+  I NGE
Sbjct: 237 VPSYFVGLVLENCNLPYANHGHVILGDPSPILFYPISSTEIRCFVDVPTGRKLPSIGNGE 296

Query: 325 MADYLKTMVTPQIPPELHDAFVSAINRGNIRTMPNGSMPADPRPTPGALLMGDAFNMRHP 384
           M  +LK ++ PQIPPEL+++F++A+++GNIR+MPN SMPA P  TPGAL+MGDAFNMRHP
Sbjct: 297 MTHFLKIVIAPQIPPELYNSFIAAVDKGNIRSMPNRSMPASPYLTPGALMMGDAFNMRHP 356

Query: 385 LTGGGMTVALSDIVVLQDLLKPLCDLNDAASLCRYLESFYTLRK 428
           LTGGGMTVALSDI +L++LLKPL +L+DA++LC+YLESFYT RK
Sbjct: 357 LTGGGMTVALSDIALLRNLLKPLHNLHDASALCKYLESFYTFRK 400


>Medtr6g034955.1 | squalene monooxygenase | HC |
           chr6:12253385-12243348 | 20130731
          Length = 527

 Score =  526 bits (1356), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 249/344 (72%), Positives = 296/344 (86%), Gaps = 2/344 (0%)

Query: 86  SGGAYDVIIVGAGVTGSALAHTLAKDGRRVHVIERDLREPDRIVGELLQPGGYLKLIELG 145
           + G  D+IIVGAGV GSALA+TL KDGRRVHVIERDL EPDRIVGELLQPGGYLKL+ELG
Sbjct: 58  AAGGTDIIIVGAGVAGSALAYTLGKDGRRVHVIERDLNEPDRIVGELLQPGGYLKLLELG 117

Query: 146 LQDCVEQIDAQRVLGYVLFKDGESTNLPYPLQKFHADVTGKSFHNGRFIQRLREKAAALP 205
           L+DCV++IDAQRV GY L+KDG++  L YPL+ F+ADV+G+SFHNGRFIQ++REKA+ LP
Sbjct: 118 LEDCVDEIDAQRVFGYALYKDGKNIKLSYPLENFNADVSGRSFHNGRFIQKMREKASLLP 177

Query: 206 NVQMEQGIATSLLEDDNKTIIGVHYKTKDRQEFKAYAPLTIVCDGCFSNLRHSLCHPKVE 265
           NV++EQG  TSL+E  N +IIGV+YK K  QEF   APLTIVCDGCFSNLR SLC PKVE
Sbjct: 178 NVKLEQGTVTSLVE-INGSIIGVNYKNKSGQEFNEKAPLTIVCDGCFSNLRSSLCKPKVE 236

Query: 266 VPSCFVGLILENCQLPFQNYGHVILADPSPILFYPISSTEIRCLVDIP-GHKVHPISNGE 324
           VPS FVGL+LENC LP+ N+GHVIL DPSP+LFYPISSTEIRC VD+P G ++  + NGE
Sbjct: 237 VPSYFVGLVLENCNLPYANHGHVILGDPSPLLFYPISSTEIRCFVDVPAGKRLPSLVNGE 296

Query: 325 MADYLKTMVTPQIPPELHDAFVSAINRGNIRTMPNGSMPADPRPTPGALLMGDAFNMRHP 384
           M  YLKTMV PQIPPEL+++F++A+++ NIR MPN SMPA P  TPGAL+MGDAFNMRHP
Sbjct: 297 MTHYLKTMVAPQIPPELYNSFIAAVDKRNIRVMPNRSMPATPYVTPGALMMGDAFNMRHP 356

Query: 385 LTGGGMTVALSDIVVLQDLLKPLCDLNDAASLCRYLESFYTLRK 428
           LTGGGMTVALSDIV+L++LLKPL +L+D ++LC+YLE FYTLRK
Sbjct: 357 LTGGGMTVALSDIVLLRNLLKPLHNLSDVSTLCKYLEPFYTLRK 400



 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 23/30 (76%), Positives = 25/30 (83%)

Query: 430 ALGIIFPIIKAEGVRQTFFPGTLPAFYRTP 459
           ALGIIFPIIKAEG+RQ FFP T+P  YR P
Sbjct: 495 ALGIIFPIIKAEGIRQMFFPATVPMCYRMP 524


>Medtr4g092640.1 | squalene monooxygenase | HC |
           chr4:36749132-36744844 | 20130731
          Length = 525

 Score =  521 bits (1342), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 248/326 (76%), Positives = 289/326 (88%), Gaps = 2/326 (0%)

Query: 104 LAHTLAKDGRRVHVIERDLREPDRIVGELLQPGGYLKLIELGLQDCVEQIDAQRVLGYVL 163
           LA+TL KDGRRVHVIERDL EPDRIVGELLQPGGYLKL+ELGL+DCV++IDAQRV GY L
Sbjct: 74  LAYTLGKDGRRVHVIERDLTEPDRIVGELLQPGGYLKLLELGLEDCVDEIDAQRVFGYAL 133

Query: 164 FKDGESTNLPYPLQKFHADVTGKSFHNGRFIQRLREKAAALPNVQMEQGIATSLLEDDNK 223
           +KDG++T L YPL+KF +DV+G+SFHNGRFIQR+REKA+ +P V++EQG  TSLLE +N 
Sbjct: 134 YKDGKNTKLSYPLEKFDSDVSGRSFHNGRFIQRMREKASTIPTVKLEQGTVTSLLE-ENG 192

Query: 224 TIIGVHYKTKDRQEFKAYAPLTIVCDGCFSNLRHSLCHPKVEVPSCFVGLILENCQLPFQ 283
           TI GV+YK K  QEF A APLTIVCDGCFSNLR SLC+PKVEVPS FVGLILENC LP  
Sbjct: 193 TIKGVNYKNKSGQEFTAKAPLTIVCDGCFSNLRRSLCNPKVEVPSHFVGLILENCNLPHA 252

Query: 284 NYGHVILADPSPILFYPISSTEIRCLVDIP-GHKVHPISNGEMADYLKTMVTPQIPPELH 342
           N+GHVIL DPSPILFYPISSTEIRCLVD+P G K+  + NGEMA+YLKT+V PQ+PPELH
Sbjct: 253 NHGHVILGDPSPILFYPISSTEIRCLVDVPTGQKLPSLGNGEMANYLKTVVAPQVPPELH 312

Query: 343 DAFVSAINRGNIRTMPNGSMPADPRPTPGALLMGDAFNMRHPLTGGGMTVALSDIVVLQD 402
            +F++A+++GNIR+MPN SMPA P PTPGALLMGDAFNMRHPLTGGGMTVALSDIV+L++
Sbjct: 313 ASFIAAVDKGNIRSMPNRSMPASPYPTPGALLMGDAFNMRHPLTGGGMTVALSDIVLLRN 372

Query: 403 LLKPLCDLNDAASLCRYLESFYTLRK 428
           LLKPL +L+DA++LC YLESFYTLRK
Sbjct: 373 LLKPLRNLHDASALCIYLESFYTLRK 398



 Score = 56.2 bits (134), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 24/31 (77%), Positives = 27/31 (87%)

Query: 430 ALGIIFPIIKAEGVRQTFFPGTLPAFYRTPP 460
           A GIIFPIIKAEGVRQ FFP ++PA+YR PP
Sbjct: 493 ASGIIFPIIKAEGVRQMFFPASVPAYYRMPP 523


>Medtr3g103510.2 | squalene epoxidase | HC | chr3:47787960-47793388
           | 20130731
          Length = 365

 Score =  372 bits (956), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 178/223 (79%), Positives = 201/223 (90%), Gaps = 1/223 (0%)

Query: 206 NVQMEQGIATSLLEDDNKTIIGVHYKTKDRQEFKAYAPLTIVCDGCFSNLRHSLCHPKVE 265
           +V++EQG  TSLLE+ N TI GV YKTKD QEF A APLTIVCDGCFSNLR SLC+PKVE
Sbjct: 17  SVRLEQGTVTSLLEE-NGTIKGVQYKTKDAQEFSACAPLTIVCDGCFSNLRRSLCNPKVE 75

Query: 266 VPSCFVGLILENCQLPFQNYGHVILADPSPILFYPISSTEIRCLVDIPGHKVHPISNGEM 325
           VPSCFVGL+LENC+LP  ++GHVIL DPSP+LFYPISSTEIRCLVD+PG KV  ISNGEM
Sbjct: 76  VPSCFVGLVLENCELPCADHGHVILGDPSPVLFYPISSTEIRCLVDVPGQKVPSISNGEM 135

Query: 326 ADYLKTMVTPQIPPELHDAFVSAINRGNIRTMPNGSMPADPRPTPGALLMGDAFNMRHPL 385
           A YLKT+V PQ+PPELH AF++A+++G+IRTMPN SMPADP PTPGALLMGDAFNMRHPL
Sbjct: 136 AKYLKTVVAPQVPPELHAAFIAAVDKGHIRTMPNRSMPADPYPTPGALLMGDAFNMRHPL 195

Query: 386 TGGGMTVALSDIVVLQDLLKPLCDLNDAASLCRYLESFYTLRK 428
           TGGGMTVALSDIVVL++LLKPL DLNDA+SLC+YLESFYTLRK
Sbjct: 196 TGGGMTVALSDIVVLRNLLKPLRDLNDASSLCKYLESFYTLRK 238



 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/31 (74%), Positives = 26/31 (83%)

Query: 430 ALGIIFPIIKAEGVRQTFFPGTLPAFYRTPP 460
           A GII PIIKAEG+RQ FFP T+PA+YR PP
Sbjct: 333 ASGIILPIIKAEGIRQMFFPATVPAYYRAPP 363