Miyakogusa Predicted Gene

Lj0g3v0267149.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0267149.1 Non Characterized Hit- tr|I3STL3|I3STL3_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,87.5,0.000000000000003, ,CUFF.17630.1
         (53 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr4g086750.1 | plastocyanin-like domain protein | HC | chr4:3...    65   2e-11
Medtr4g086740.1 | plastocyanin-like domain protein | HC | chr4:3...    64   3e-11
Medtr4g086730.1 | plastocyanin-like domain protein | HC | chr4:3...    63   6e-11
Medtr4g086710.1 | plastocyanin-like domain protein | HC | chr4:3...    62   1e-10

>Medtr4g086750.1 | plastocyanin-like domain protein | HC |
          chr4:34008307-34007418 | 20130731
          Length = 184

 Score = 64.7 bits (156), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/47 (63%), Positives = 39/47 (82%), Gaps = 3/47 (6%)

Query: 10 IMMLVITVSMFAVSMANKEWSS--GFNYTDWWSRFGNHNYN-NKTEQ 53
          +++++IT SMF V+MANK+W S   FNYTDWWSRFGNH++  NKTEQ
Sbjct: 13 LLLVIITTSMFTVTMANKDWPSFGNFNYTDWWSRFGNHHHQINKTEQ 59


>Medtr4g086740.1 | plastocyanin-like domain protein | HC |
          chr4:34003801-34003089 | 20130731
          Length = 182

 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/48 (66%), Positives = 37/48 (77%), Gaps = 3/48 (6%)

Query: 9  LIMMLVITVSMFAVSMANKEWSS--GFNYTDWWSRFGNHNYN-NKTEQ 53
          +   LVIT SMF V+MANK+W S   FNYTDWWSRFGNH++  NKTEQ
Sbjct: 10 VFTFLVITTSMFTVTMANKDWPSFGNFNYTDWWSRFGNHHHQINKTEQ 57


>Medtr4g086730.1 | plastocyanin-like domain protein | HC |
          chr4:34000379-33999721 | 20130731
          Length = 183

 Score = 63.2 bits (152), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 30/48 (62%), Positives = 38/48 (79%), Gaps = 3/48 (6%)

Query: 9  LIMMLVITVSMFAVSMANKEWSS--GFNYTDWWSRFGNHNYN-NKTEQ 53
          L ++++IT SMF V++ANK+W S   FNYTDWWSRFGNH+   NKTEQ
Sbjct: 11 LTLLVIITASMFTVTVANKDWPSFGNFNYTDWWSRFGNHHRQINKTEQ 58


>Medtr4g086710.1 | plastocyanin-like domain protein | HC |
          chr4:33995689-33994961 | 20130731
          Length = 183

 Score = 61.6 bits (148), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/47 (59%), Positives = 39/47 (82%), Gaps = 3/47 (6%)

Query: 10 IMMLVITVSMFAVSMANKEWSS--GFNYTDWWSRFGNHNYN-NKTEQ 53
          +++++I+ SMF V++ANK+W S   FNYTDWWSRFGNH++  NKTEQ
Sbjct: 13 LLLVIISASMFTVTVANKDWPSFGNFNYTDWWSRFGNHHHQINKTEQ 59