Miyakogusa Predicted Gene

Lj0g3v0266449.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0266449.1 tr|Q53LP8|Q53LP8_ORYSJ Seed protein B32E OS=Oryza
sativa subsp. japonica GN=LOC_Os11g09320 PE=4
SV=1,40.78,0.000000000000003,seg,NULL,CUFF.17594.1
         (165 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr3g088805.1 | ENTH/VHS/GAT family protein | HC | chr3:406273...   162   1e-40

>Medtr3g088805.1 | ENTH/VHS/GAT family protein | HC |
           chr3:40627393-40621194 | 20130731
          Length = 507

 Score =  162 bits (411), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 88/155 (56%), Positives = 106/155 (68%), Gaps = 2/155 (1%)

Query: 1   MVDYLSGDAYETEVSYDNSEPTPYAVPLHSDXXXXXXXXXXXXXXXXXXXMNTSTPGFSK 60
           MVDYLSGDAY+ E S +NSEPT +A PLHS                      TS+P +S+
Sbjct: 340 MVDYLSGDAYKAEGSLENSEPTSFAAPLHS-SPNPTSSAIPTESSTHPHATTTSSPIYSR 398

Query: 61  QPIYDEPSPVNKSSESLSPAPGDTQSPGILPPPPARFNQRQNFFEEQGMXXXXXXXXXXX 120
           QPIYDEPSP+ K+SE L PAP DTQ+P ++PPPP+++NQRQ FFE+QG            
Sbjct: 399 QPIYDEPSPM-KTSEPLPPAPWDTQAPVVIPPPPSKYNQRQQFFEQQGSSHSSNGSSSST 457

Query: 121 XXLLGQTQNLSLNSSTPTKQEKLEDALFKDLLDFA 155
             LLGQTQNLSLNSSTPTK++K EDALFKDL+DFA
Sbjct: 458 DSLLGQTQNLSLNSSTPTKEQKPEDALFKDLVDFA 492