Miyakogusa Predicted Gene

Lj0g3v0266329.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0266329.1 Non Characterized Hit- tr|I1LFC1|I1LFC1_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.4805
PE=,69.05,0,METHIONYL-TRNA SYNTHETASE,NULL; ISOLEUCYL, LEUCYL,
TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES,NUL,CUFF.17562.1
         (214 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr1g115295.1 | methionyl-tRNA synthetase | HC | chr1:52009887...   323   1e-88
Medtr1g018280.1 | methionyl-tRNA synthetase | HC | chr1:5180825-...   193   1e-49

>Medtr1g115295.1 | methionyl-tRNA synthetase | HC |
           chr1:52009887-52001896 | 20130731
          Length = 600

 Score =  323 bits (827), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 164/251 (65%), Positives = 181/251 (72%), Gaps = 44/251 (17%)

Query: 1   MAVRMNCSLQTTLSLFSLRPRASHLNLKH---HLHLGQTPPPHSRGALFCSTTSVNTSPS 57
           MAVRMNCSLQ TLS+ SLR  +S  + K    + H     P   R A FC      TS +
Sbjct: 1   MAVRMNCSLQNTLSILSLRSNSSVSHFKSSKPYFHF----PSSRRAAFFCKCA---TSSN 53

Query: 58  NDESFVLTTPLYYVNAPPHMGSAYSTIAADAIARFQ------------------------ 93
           +D+ +V+TTPLYYVNAPPHMGSAYSTIAADAIARFQ                        
Sbjct: 54  DDQPYVITTPLYYVNAPPHMGSAYSTIAADAIARFQRLLGKKVIFITGTDEHGEKIATAA 113

Query: 94  ----------VXLVSQAYKTLWKDLDISYDKFIRTTDSKHEAIVKEFYSRVLANGDIYRA 143
                       L+SQAYKTLW DLDISYDKFIRTTDSKHEA+VKEFYSRVLANGDIYRA
Sbjct: 114 LAQGSTPTDHCNLISQAYKTLWNDLDISYDKFIRTTDSKHEAVVKEFYSRVLANGDIYRA 173

Query: 144 DYEGLYCVNCEEYKDEKELLDNNCCPVHQKPCVSRKEDNYFFALSKYQKSLEETLNTNPN 203
           DYEG+YCV+CEEYKDEKELL+NNCCP+H KPCVSRKEDNYFFALSKYQKSLEE LN NPN
Sbjct: 174 DYEGIYCVSCEEYKDEKELLENNCCPIHLKPCVSRKEDNYFFALSKYQKSLEEILNKNPN 233

Query: 204 FVQPSYRLNEV 214
           FVQPS+RL+EV
Sbjct: 234 FVQPSFRLHEV 244


>Medtr1g018280.1 | methionyl-tRNA synthetase | HC |
           chr1:5180825-5174351 | 20130731
          Length = 461

 Score =  193 bits (490), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 86/96 (89%), Positives = 92/96 (95%)

Query: 96  LVSQAYKTLWKDLDISYDKFIRTTDSKHEAIVKEFYSRVLANGDIYRADYEGLYCVNCEE 155
           L+SQAYKTLW DLDISYDKFIRTTDSKH A+VKEFYSRVLANGDIYRADYEG+Y V+CEE
Sbjct: 95  LISQAYKTLWNDLDISYDKFIRTTDSKHVAVVKEFYSRVLANGDIYRADYEGIYSVSCEE 154

Query: 156 YKDEKELLDNNCCPVHQKPCVSRKEDNYFFALSKYQ 191
           YKDEKELL+NNCCP+H KPCVSRKEDNYFFALSKYQ
Sbjct: 155 YKDEKELLENNCCPIHLKPCVSRKEDNYFFALSKYQ 190