Miyakogusa Predicted Gene

Lj0g3v0266309.1
Show Alignment:  

BLASTP 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= Lj0g3v0266309.1 tr|G7K743|G7K743_MEDTR Serine
palmitoyltransferase OS=Medicago truncatula GN=MTR_5g072020 PE=4
SV=1,87.17,0,PLP-dependent transferases,Pyridoxal phosphate-dependent
transferase, major domain; SERINE PALMITOYL,CUFF.17571.1
         (308 letters)

Database: Medicago_aa4.0v1 
           62,319 sequences; 21,947,249 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Medtr5g072020.1 | long chain base biosynthesis protein 1a | HC |...   540   e-154
Medtr3g054030.1 | long chain base biosynthesis protein 1a | HC |...   533   e-152
Medtr1g018970.1 | long chain base biosynthesis protein 1a | HC |...   522   e-148
Medtr6g033290.1 | long chain base biosynthesis 2a-like protein |...    96   5e-20
Medtr3g008020.1 | 8-amino-7-oxononanoate synthase-like protein |...    70   3e-12

>Medtr5g072020.1 | long chain base biosynthesis protein 1a | HC |
           chr5:30640537-30633377 | 20130731
          Length = 480

 Score =  540 bits (1390), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 254/304 (83%), Positives = 276/304 (90%)

Query: 5   MAATVVDFVNTALGWLSFAVDAPSARAVVFGVNIGGHXXXXXXXXXXXXXXXSQKSYKPP 64
           MA+  V+FVNT L W+++A+DAPSARA+VFG N GGH               SQKSYKPP
Sbjct: 2   MASAAVNFVNTTLNWVTYALDAPSARAIVFGYNFGGHLFIEVFLLVVILFLLSQKSYKPP 61

Query: 65  KRPLTNKEIDELCDEWAPESLIPSLNEEMLYEPPVLESAAGPHTIVNGKDVVNFSSANYL 124
           KRPLTNKEIDELCDEW P+SLIPSL+++M YEPPVLESAAGPHTIVNGK+V+NF+SANYL
Sbjct: 62  KRPLTNKEIDELCDEWVPQSLIPSLDKDMHYEPPVLESAAGPHTIVNGKEVINFASANYL 121

Query: 125 GLVGHQKLLDSCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLS 184
           GL+GHQKLLDSCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLS
Sbjct: 122 GLIGHQKLLDSCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLS 181

Query: 185 TMFSAIPAFSKKGDIIVADEGVHWGIQNGLHLSRSTVVYFKHNDMDSLRETLEKITIKYK 244
           TMFSAIPAFSKKGDIIVADEGVHWGIQNGL+LSRSTVVYFKHNDMDSL ETLEK+T KYK
Sbjct: 182 TMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLEETLEKLTSKYK 241

Query: 245 RVKNLRRYIVVEAIYQNSGQIAPLDEIIKLKEKYRFRVLMDESNSFGVLGSSGRGLTEYY 304
             KNLRRYIVVEA+YQNSGQIAPLD+IIKLKEKYRFR+L+DESNSFGVLGSSGRGLTE+Y
Sbjct: 242 HTKNLRRYIVVEALYQNSGQIAPLDDIIKLKEKYRFRILLDESNSFGVLGSSGRGLTEHY 301

Query: 305 DVPV 308
            VPV
Sbjct: 302 GVPV 305


>Medtr3g054030.1 | long chain base biosynthesis protein 1a | HC |
           chr3:21428489-21422336 | 20130731
          Length = 480

 Score =  533 bits (1373), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 251/304 (82%), Positives = 274/304 (90%)

Query: 5   MAATVVDFVNTALGWLSFAVDAPSARAVVFGVNIGGHXXXXXXXXXXXXXXXSQKSYKPP 64
           MA+  V+FVNT L W+++A+DAPSARA+VFG N GGH               SQKSYKPP
Sbjct: 2   MASAAVNFVNTTLNWVTYALDAPSARAIVFGYNFGGHLFIEVFLLVVILFLLSQKSYKPP 61

Query: 65  KRPLTNKEIDELCDEWAPESLIPSLNEEMLYEPPVLESAAGPHTIVNGKDVVNFSSANYL 124
           KRPLTNKEIDELCDEW P+ LIPSL+++M YEPPVLESAAGPHTIVNGK+V+NF+SANYL
Sbjct: 62  KRPLTNKEIDELCDEWVPQPLIPSLDKDMHYEPPVLESAAGPHTIVNGKEVINFASANYL 121

Query: 125 GLVGHQKLLDSCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLS 184
           GL+GHQKLLDSCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFL TPDSILYSYGLS
Sbjct: 122 GLIGHQKLLDSCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLRTPDSILYSYGLS 181

Query: 185 TMFSAIPAFSKKGDIIVADEGVHWGIQNGLHLSRSTVVYFKHNDMDSLRETLEKITIKYK 244
           TMFSAIPAFSKKGDIIVADEGVHWGIQNGL+LSRSTVVYFKHNDMDSL ETLEK++ KYK
Sbjct: 182 TMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNDMDSLEETLEKLSSKYK 241

Query: 245 RVKNLRRYIVVEAIYQNSGQIAPLDEIIKLKEKYRFRVLMDESNSFGVLGSSGRGLTEYY 304
             KNLRRYIVVEA+YQNSGQIAPLD+IIKLKEKYRFR+L+DESNSFGVLGSSGRGLTE+Y
Sbjct: 242 HTKNLRRYIVVEALYQNSGQIAPLDDIIKLKEKYRFRILLDESNSFGVLGSSGRGLTEHY 301

Query: 305 DVPV 308
            VPV
Sbjct: 302 GVPV 305


>Medtr1g018970.1 | long chain base biosynthesis protein 1a | HC |
           chr1:5618721-5624026 | 20130731
          Length = 347

 Score =  522 bits (1344), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 249/304 (81%), Positives = 273/304 (89%)

Query: 5   MAATVVDFVNTALGWLSFAVDAPSARAVVFGVNIGGHXXXXXXXXXXXXXXXSQKSYKPP 64
           MA++ ++FVNT +  +++A+ APSARAVVFG NIGGH               SQKSYKPP
Sbjct: 1   MASSFINFVNTTIDLVTYALHAPSARAVVFGFNIGGHLFIEVLLLVVILFLLSQKSYKPP 60

Query: 65  KRPLTNKEIDELCDEWAPESLIPSLNEEMLYEPPVLESAAGPHTIVNGKDVVNFSSANYL 124
           KRPL+NKEIDELCDEW P+ LIPSLN+EM YEPPVLESAAGPHTIVNGK+VVNF+SANYL
Sbjct: 61  KRPLSNKEIDELCDEWVPQPLIPSLNDEMPYEPPVLESAAGPHTIVNGKEVVNFASANYL 120

Query: 125 GLVGHQKLLDSCTSALEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLS 184
           GL+GHQKLLDSC+SALEKYGVGSCGPRGFYGTIDVHLDCE RI+KFLGTPDSILYSYGLS
Sbjct: 121 GLIGHQKLLDSCSSALEKYGVGSCGPRGFYGTIDVHLDCEGRISKFLGTPDSILYSYGLS 180

Query: 185 TMFSAIPAFSKKGDIIVADEGVHWGIQNGLHLSRSTVVYFKHNDMDSLRETLEKITIKYK 244
           TMFSAIPAFSKKGDIIVADEGVHWGIQNGL+LSRSTVVYFKHN+MDSLRETLE IT  YK
Sbjct: 181 TMFSAIPAFSKKGDIIVADEGVHWGIQNGLYLSRSTVVYFKHNNMDSLRETLENITSIYK 240

Query: 245 RVKNLRRYIVVEAIYQNSGQIAPLDEIIKLKEKYRFRVLMDESNSFGVLGSSGRGLTEYY 304
           R KNLRRYIV+EA+YQNSGQIAPLDEIIKLKEKY FR+L+DESNSFGVLGSSGRGLTE+Y
Sbjct: 241 RTKNLRRYIVIEALYQNSGQIAPLDEIIKLKEKYCFRILLDESNSFGVLGSSGRGLTEHY 300

Query: 305 DVPV 308
            VPV
Sbjct: 301 GVPV 304


>Medtr6g033290.1 | long chain base biosynthesis 2a-like protein | HC
           | chr6:10618345-10608414 | 20130731
          Length = 490

 Score = 95.9 bits (237), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 63/199 (31%), Positives = 98/199 (49%), Gaps = 10/199 (5%)

Query: 115 VVNFSSANYLGLVGHQKLLDSCT----SALEKYGVGSCGPRGFYGTIDVHLDCEARIAKF 170
            +N  S NYLG        + CT      L+KY   +C  R   GT  +H + E  +A F
Sbjct: 102 CLNLGSYNYLGFAAAD---EYCTPRVIDTLKKYSPSTCSTRVDGGTTALHNELEECVASF 158

Query: 171 LGTPDSILYSYGLSTMFSAIPAFSKKGDIIVADEGVHWGIQNGLHLSRSTVVYFKHNDMD 230
           +  P ++++  G  T  + +P    KG +I++D   H  I NG   S +T+  F+HN   
Sbjct: 159 VKKPAALVFGMGYVTNSAILPVLMGKGSLIISDSLNHNSIVNGARGSGATIRVFQHNVPS 218

Query: 231 SLRETL-EKITIKYKRVKNLRRYI--VVEAIYQNSGQIAPLDEIIKLKEKYRFRVLMDES 287
            L E L E+I     R     + I  +VE IY   G++  L E+I + +KY+    +DE+
Sbjct: 219 HLEEVLREQIAEGQPRTHRPWKKIMVIVEGIYSMEGELCKLPEVIAICKKYKAYTYLDEA 278

Query: 288 NSFGVLGSSGRGLTEYYDV 306
           +S G +G +GRG+ E   V
Sbjct: 279 HSIGAVGKTGRGVCELLGV 297


>Medtr3g008020.1 | 8-amino-7-oxononanoate synthase-like protein | HC
           | chr3:1291558-1284618 | 20130731
          Length = 473

 Score = 69.7 bits (169), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 107/245 (43%), Gaps = 40/245 (16%)

Query: 87  PSLNEEMLY-------EPPVLESAAGPHTIVNGKDVVNFSSANYLGLVGHQKLLDSCTSA 139
           PS  EE++Y       EP V             + ++ FS  +YLGL  H  +  +   A
Sbjct: 75  PSSGEEIVYGAASGDNEPGVCHE--------KFRKLILFSGNDYLGLSSHPTIGKAAAKA 126

Query: 140 LEKYGVGSCGPRGFYGTIDVHLDCEARIAKFLGTPDSILYSYGLSTMFSAIPAFSKKGDI 199
            +++G+G  G     G  + H   E+ +A      D +L   G +   + + A    G +
Sbjct: 127 AQEHGMGPRGSALICGYTNYHRQLESSLADLKKKEDCLLCPTGFAANMALMTAIGSIGSL 186

Query: 200 IVA------DEGV--------HWGIQNGLHLSRS----TVVYFKHNDMDSLRETLEKITI 241
           +        DE +        H  I +G+ L+       +  ++H DM  L   L   ++
Sbjct: 187 LAGNSIPSDDEKIAVFSDALNHASIIDGIRLAERRKGVKLYVYRHCDMSHLHTLLSHCSM 246

Query: 242 KYKRVKNLRRYIVVEAIYQNSGQIAPLDEIIKLKEKYRFRVLMDESNSFGVLGSSGRGLT 301
           K       R+ ++ ++++   G  AP+ E+ +L++K+ F +++D+++   V G +G G+ 
Sbjct: 247 K-------RKIVITDSLFSMDGDFAPMVELAELRKKHGFLLVIDDAHGTFVCGKNGGGVA 299

Query: 302 EYYDV 306
           E ++ 
Sbjct: 300 EEFNC 304